RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 WNK3Q9BYP7 1800 aa27.39■■□□□ 1.97
CTSA-206ENST00000480961 U2SURPO15042 1029 aaKnown RBP27.38■■□□□ 1.97
CTSA-206ENST00000480961 HMOX1P09601 288 aa27.38■■□□□ 1.97
CTSA-206ENST00000480961 COL3A1P02461 1466 aaPredicted RBP27.37■■□□□ 1.97
CTSA-206ENST00000480961 PRKRIP1Q9H875 184 aaPredicted RBP27.35■■□□□ 1.97
CTSA-206ENST00000480961 PTF1AQ7RTS3 328 aa27.34■■□□□ 1.97
CTSA-206ENST00000480961 ACSBG1Q96GR2 724 aa27.34■■□□□ 1.97
CTSA-206ENST00000480961 SF3B2Q13435 895 aaKnown RBP27.32■■□□□ 1.96
CTSA-206ENST00000480961 SPG7Q9UQ90 795 aa27.32■■□□□ 1.96
CTSA-206ENST00000480961 CYP27B1O15528 508 aa27.31■■□□□ 1.96
CTSA-206ENST00000480961 DEFB132Q7Z7B7 95 aa27.31■■□□□ 1.96
CTSA-206ENST00000480961 CCDC125Q86Z20 511 aa27.31■■□□□ 1.96
CTSA-206ENST00000480961 MYBBP1AQ9BQG0 1328 aaKnown RBP27.31■■□□□ 1.96
CTSA-206ENST00000480961 KCNQ2O43526 872 aa27.3■■□□□ 1.96
CTSA-206ENST00000480961 NUDCQ9Y266 331 aa27.29■■□□□ 1.96
CTSA-206ENST00000480961 KDRP35968 1356 aa27.28■■□□□ 1.96
CTSA-206ENST00000480961 PCDH11XQ9BZA7 1347 aa27.28■■□□□ 1.96
CTSA-206ENST00000480961 PCDH11YQ9BZA8 1340 aa27.28■■□□□ 1.96
CTSA-206ENST00000480961 APBA3O96018 575 aa27.27■■□□□ 1.96
CTSA-206ENST00000480961 U2AF1L5P0DN76 240 aaPredicted RBP27.27■■□□□ 1.96
CTSA-206ENST00000480961 U2AF1Q01081 240 aaKnown RBP eCLIP27.27■■□□□ 1.96
CTSA-206ENST00000480961 PLEKHO1Q53GL0 409 aaPredicted RBP27.27■■□□□ 1.96
CTSA-206ENST00000480961 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.26■■□□□ 1.95
CTSA-206ENST00000480961 RGPD1P0DJD0 1748 aa27.26■■□□□ 1.95
CTSA-206ENST00000480961 BCL9O00512 1426 aa27.24■■□□□ 1.95
CTSA-206ENST00000480961 EN1Q05925 392 aaPredicted RBP27.24■■□□□ 1.95
CTSA-206ENST00000480961 BCL11BQ9C0K0 894 aaPredicted RBP27.24■■□□□ 1.95
CTSA-206ENST00000480961 PRIM1P49642 420 aaKnown RBP27.23■■□□□ 1.95
CTSA-206ENST00000480961 ZNF530Q6P9A1 599 aaPredicted RBP27.23■■□□□ 1.95
CTSA-206ENST00000480961 SYTL4Q96C24 671 aaPredicted RBP27.23■■□□□ 1.95
CTSA-206ENST00000480961 PHKG2P15735 406 aa27.22■■□□□ 1.95
CTSA-206ENST00000480961 AMOTQ4VCS5 1084 aa27.22■■□□□ 1.95
CTSA-206ENST00000480961 IFNL2Q8IZJ0 200 aa27.22■■□□□ 1.95
CTSA-206ENST00000480961 ANP32CO43423 234 aa27.21■■□□□ 1.95
CTSA-206ENST00000480961 BAG6P46379 1132 aa27.21■■□□□ 1.95
CTSA-206ENST00000480961 RSPH6AQ9H0K4 717 aa27.2■■□□□ 1.94
CTSA-206ENST00000480961 SHANK3Q9BYB0 1731 aa27.19■■□□□ 1.94
CTSA-206ENST00000480961 PRKAR2BP31323 418 aa27.19■■□□□ 1.94
CTSA-206ENST00000480961 MTHFSDQ2M296 383 aaKnown RBP27.18■■□□□ 1.94
CTSA-206ENST00000480961 NKX1-1Q15270 411 aaPredicted RBP27.17■■□□□ 1.94
CTSA-206ENST00000480961 EZH2Q15910 746 aaKnown RBP27.17■■□□□ 1.94
CTSA-206ENST00000480961 PHACTR3Q96KR7 559 aa27.17■■□□□ 1.94
CTSA-206ENST00000480961 C1orf141Q5JVX7 400 aa27.16■■□□□ 1.94
CTSA-206ENST00000480961 PKD1L3Q7Z443 1732 aa27.16■■□□□ 1.94
CTSA-206ENST00000480961 CAMKK2Q96RR4 588 aa27.15■■□□□ 1.94
CTSA-206ENST00000480961 FCHSD2O94868 740 aa27.14■■□□□ 1.94
CTSA-206ENST00000480961 CCDC184Q52MB2 194 aa27.14■■□□□ 1.94
CTSA-206ENST00000480961 MPRIPQ6WCQ1 1025 aa27.14■■□□□ 1.94
CTSA-206ENST00000480961 PLEKHG2Q9H7P9 1386 aa27.13■■□□□ 1.93
CTSA-206ENST00000480961 TNS1Q9HBL0 1735 aaKnown RBP27.12■■□□□ 1.93
CTSA-206ENST00000480961 AKAP4Q5JQC9 854 aa27.1■■□□□ 1.93
CTSA-206ENST00000480961 SBF2Q86WG5 1849 aa27.09■■□□□ 1.93
CTSA-206ENST00000480961 HSP90AB1P08238 724 aaKnown RBP27.09■■□□□ 1.93
CTSA-206ENST00000480961 DCAF5Q96JK2 942 aa27.09■■□□□ 1.93
CTSA-206ENST00000480961 PLSCR1O15162 318 aa27.08■■□□□ 1.93
CTSA-206ENST00000480961 WDR43Q15061 677 aaKnown RBP eCLIP27.08■■□□□ 1.93
CTSA-206ENST00000480961 PIGBQ92521 554 aa27.08■■□□□ 1.93
CTSA-206ENST00000480961 LGR6Q9HBX8 967 aa27.08■■□□□ 1.93
CTSA-206ENST00000480961 PROM2Q8N271 834 aa27.07■■□□□ 1.92
CTSA-206ENST00000480961 GAS2L2Q8NHY3 880 aa27.07■■□□□ 1.92
CTSA-206ENST00000480961 NHSQ6T4R5 1651 aa27.07■■□□□ 1.92
CTSA-206ENST00000480961 KDM6AO15550 1401 aaPredicted RBP27.07■■□□□ 1.92
CTSA-206ENST00000480961 TMOD3Q9NYL9 352 aa27.06■■□□□ 1.92
CTSA-206ENST00000480961 DOT1LQ8TEK3 1739 aa27.06■■□□□ 1.92
CTSA-206ENST00000480961 PLEKHF1Q96S99 279 aa27.05■■□□□ 1.92
CTSA-206ENST00000480961 ADAMTS8Q9UP79 889 aa27.05■■□□□ 1.92
CTSA-206ENST00000480961 CCDC146Q8IYE0 955 aa27.04■■□□□ 1.92
CTSA-206ENST00000480961 ERVV-2B6SEH9 535 aa27.03■■□□□ 1.92
CTSA-206ENST00000480961 RNMTO43148 476 aaKnown RBP27.03■■□□□ 1.92
CTSA-206ENST00000480961 CABP4P57796 275 aa27.03■■□□□ 1.92
CTSA-206ENST00000480961 TXNRD1Q16881 649 aa27.03■■□□□ 1.92
CTSA-206ENST00000480961 KAT6BQ8WYB5 2073 aa27.03■■□□□ 1.92
CTSA-206ENST00000480961 GNAT3A8MTJ3 354 aa27.02■■□□□ 1.92
CTSA-206ENST00000480961 KCNQ4P56696 695 aa27.02■■□□□ 1.92
CTSA-206ENST00000480961 MRS2Q9HD23 443 aa27.02■■□□□ 1.92
CTSA-206ENST00000480961 TOGARAM1Q9Y4F4 1720 aa27.02■■□□□ 1.92
CTSA-206ENST00000480961 NFATC2IPQ8NCF5 419 aa27.01■■□□□ 1.91
CTSA-206ENST00000480961 MAP3K5Q99683 1374 aa27■■□□□ 1.91
CTSA-206ENST00000480961 NEFMP07197 916 aa27■■□□□ 1.91
CTSA-206ENST00000480961 ASAP1Q9ULH1 1129 aa27■■□□□ 1.91
CTSA-206ENST00000480961 MAPK8IP3Q9UPT6 1336 aa26.99■■□□□ 1.91
CTSA-206ENST00000480961 IL17REQ8NFR9 667 aa26.99■■□□□ 1.91
CTSA-206ENST00000480961 PNNQ9H307 717 aaKnown RBP26.99■■□□□ 1.91
CTSA-206ENST00000480961 BTAF1O14981 1849 aa26.98■■□□□ 1.91
CTSA-206ENST00000480961 ATG3Q9NT62 314 aa26.97■■□□□ 1.91
CTSA-206ENST00000480961 LRRC4BQ9NT99 713 aa26.97■■□□□ 1.91
CTSA-206ENST00000480961 DCTN1Q14203 1278 aa26.96■■□□□ 1.91
CTSA-206ENST00000480961 MCM10Q7L590 875 aa26.96■■□□□ 1.91
CTSA-206ENST00000480961 SLC52A2Q9HAB3 445 aa26.96■■□□□ 1.91
CTSA-206ENST00000480961 NFE2L2Q16236 605 aa26.95■■□□□ 1.9
CTSA-206ENST00000480961 PALLDQ8WX93 1383 aa26.95■■□□□ 1.9
CTSA-206ENST00000480961 DIEXFQ68CQ4 756 aaKnown RBP26.94■■□□□ 1.9
CTSA-206ENST00000480961 RRP7AQ9Y3A4 280 aaKnown RBP26.94■■□□□ 1.9
CTSA-206ENST00000480961 PSDA5PKW4 1024 aaPredicted RBP26.93■■□□□ 1.9
CTSA-206ENST00000480961 PNISRQ8TF01 805 aaKnown RBP26.93■■□□□ 1.9
CTSA-206ENST00000480961 RTF1Q92541 710 aaKnown RBP26.93■■□□□ 1.9
CTSA-206ENST00000480961 SMARCC1Q92922 1105 aaPredicted RBP26.93■■□□□ 1.9
CTSA-206ENST00000480961 CCNL1Q9UK58 526 aaPredicted RBP26.93■■□□□ 1.9
CTSA-206ENST00000480961 RUNDC1Q96C34 613 aa26.92■■□□□ 1.9
CTSA-206ENST00000480961 R3HDM1Q15032 1099 aaKnown RBP26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms