RNA–Protein interactions for RNA: ENST00000480321.1

MCF2L-225, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 5,727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-225ENST00000480321 SULT6B1Q6IMI4 303 aa16.07■□□□□ 0.16
MCF2L-225ENST00000480321 FMNL2Q96PY5 1086 aa16.07■□□□□ 0.16
MCF2L-225ENST00000480321 NUTM2BA6NNL0 878 aaPredicted RBP16.07■□□□□ 0.16
MCF2L-225ENST00000480321 NUTM2EB1AL46 878 aaPredicted RBP16.07■□□□□ 0.16
MCF2L-225ENST00000480321 NUTM2AQ8IVF1 878 aaPredicted RBP16.07■□□□□ 0.16
MCF2L-225ENST00000480321 NOL7Q9UMY1 257 aaKnown RBP16.07■□□□□ 0.16
MCF2L-225ENST00000480321 NFE2L2Q16236 605 aa16.07■□□□□ 0.16
MCF2L-225ENST00000480321 SF3B2Q13435 895 aaKnown RBP16.07■□□□□ 0.16
MCF2L-225ENST00000480321 GOLGA6L10A6NI86 522 aa16.06■□□□□ 0.16
MCF2L-225ENST00000480321 PRG4Q92954 1404 aaPredicted RBP16.06■□□□□ 0.16
MCF2L-225ENST00000480321 RAB11FIP3O75154 756 aa16.06■□□□□ 0.16
MCF2L-225ENST00000480321 RTEL1-TNFRSF6BF6WH68 1400 aa16.06■□□□□ 0.16
MCF2L-225ENST00000480321 WASF1Q92558 559 aa16.06■□□□□ 0.16
MCF2L-225ENST00000480321 ZNF530Q6P9A1 599 aaPredicted RBP16.06■□□□□ 0.16
MCF2L-225ENST00000480321 AXDND1Q5T1B0 1012 aaPredicted RBP16.05■□□□□ 0.16
MCF2L-225ENST00000480321 TTLL5Q6EMB2 1281 aa16.05■□□□□ 0.16
MCF2L-225ENST00000480321 SPG7Q9UQ90 795 aa16.05■□□□□ 0.16
MCF2L-225ENST00000480321 MAP3K11Q16584 847 aa16.05■□□□□ 0.16
MCF2L-225ENST00000480321 CABP1Q9NZU7 370 aa16.05■□□□□ 0.16
MCF2L-225ENST00000480321 HMGXB3Q12766 1538 aa16.05■□□□□ 0.16
MCF2L-225ENST00000480321 ATP2B2Q01814 1243 aa16.04■□□□□ 0.16
MCF2L-225ENST00000480321 CCDC69A6NI79 296 aa16.04■□□□□ 0.16
MCF2L-225ENST00000480321 TMPOP42166 694 aaKnown RBP16.04■□□□□ 0.16
MCF2L-225ENST00000480321 WWC2Q6AWC2 1192 aa16.03■□□□□ 0.16
MCF2L-225ENST00000480321 KRT18P05783 430 aaKnown RBP16.03■□□□□ 0.16
MCF2L-225ENST00000480321 UPF3BQ9BZI7 483 aaKnown RBP16.03■□□□□ 0.16
MCF2L-225ENST00000480321 SIL1Q9H173 461 aa16.03■□□□□ 0.16
MCF2L-225ENST00000480321 NSD3Q9BZ95 1437 aa16.03■□□□□ 0.16
MCF2L-225ENST00000480321 KIAA0754O94854 1291 aa16.03■□□□□ 0.16
MCF2L-225ENST00000480321 JAKMIP1Q96N16 626 aaKnown RBP16.03■□□□□ 0.16
MCF2L-225ENST00000480321 CEBPZQ03701 1054 aaKnown RBP16.03■□□□□ 0.16
MCF2L-225ENST00000480321 SH2B1Q9NRF2 756 aaPredicted RBP16.03■□□□□ 0.16
MCF2L-225ENST00000480321 USP8P40818 1118 aa16.02■□□□□ 0.16
MCF2L-225ENST00000480321 SYCP1Q15431 976 aa16.02■□□□□ 0.16
MCF2L-225ENST00000480321 GBP3Q9H0R5 595 aa16.02■□□□□ 0.16
MCF2L-225ENST00000480321 CCDC184Q52MB2 194 aa16.02■□□□□ 0.16
MCF2L-225ENST00000480321 MYL6BP14649 208 aa16.02■□□□□ 0.15
MCF2L-225ENST00000480321 CCDC183Q5T5S1 534 aa16.02■□□□□ 0.15
MCF2L-225ENST00000480321 CCDC181Q5TID7 509 aa16.02■□□□□ 0.15
MCF2L-225ENST00000480321 TMEM57Q8N5G2 664 aa16.02■□□□□ 0.15
MCF2L-225ENST00000480321 MRC2Q9UBG0 1479 aa16.02■□□□□ 0.15
MCF2L-225ENST00000480321 MCM5P33992 734 aa16.02■□□□□ 0.15
MCF2L-225ENST00000480321 CCDC57Q2TAC2 916 aa16.02■□□□□ 0.15
MCF2L-225ENST00000480321 TSPYL1Q9H0U9 437 aa16.02■□□□□ 0.15
MCF2L-225ENST00000480321 LRPPRCP42704 1394 aaKnown RBP16.01■□□□□ 0.15
MCF2L-225ENST00000480321 AACSQ86V21 672 aa16.01■□□□□ 0.15
MCF2L-225ENST00000480321 GOLGA6L7A0A1B0GV03 622 aa16.01■□□□□ 0.15
MCF2L-225ENST00000480321 BRPF1P55201 1214 aaPredicted RBP16.01■□□□□ 0.15
MCF2L-225ENST00000480321 SKIDA1Q1XH10 827 aa16.01■□□□□ 0.15
MCF2L-225ENST00000480321 CEP131Q9UPN4 1083 aa16.01■□□□□ 0.15
MCF2L-225ENST00000480321 SRGAP3O43295 1099 aa16.01■□□□□ 0.15
MCF2L-225ENST00000480321 MPHOSPH8Q99549 860 aa16.01■□□□□ 0.15
MCF2L-225ENST00000480321 SCAND2PQ9GZW5 306 aaPredicted RBP16.01■□□□□ 0.15
MCF2L-225ENST00000480321 STK11IPQ8N1F8 1099 aa16.01■□□□□ 0.15
MCF2L-225ENST00000480321 EPRSP07814 1512 aaKnown RBP16.01■□□□□ 0.15
MCF2L-225ENST00000480321 KIF1BPQ96EK5 621 aa16■□□□□ 0.15
MCF2L-225ENST00000480321 RARSP54136 660 aaKnown RBP16■□□□□ 0.15
MCF2L-225ENST00000480321 STK3Q13188 491 aa16■□□□□ 0.15
MCF2L-225ENST00000480321 TOPBP1Q92547 1522 aa16■□□□□ 0.15
MCF2L-225ENST00000480321 DEF6Q9H4E7 631 aa16■□□□□ 0.15
MCF2L-225ENST00000480321 GLRX3O76003 335 aaKnown RBP16■□□□□ 0.15
MCF2L-225ENST00000480321 ANKLE2Q86XL3 938 aa16■□□□□ 0.15
MCF2L-225ENST00000480321 NCOA1Q15788 1441 aa16■□□□□ 0.15
MCF2L-225ENST00000480321 PRDM11Q9NQV5 511 aa15.99■□□□□ 0.15
MCF2L-225ENST00000480321 PTPN23Q9H3S7 1636 aa15.99■□□□□ 0.15
MCF2L-225ENST00000480321 CTAGE5O15320 804 aa15.99■□□□□ 0.15
MCF2L-225ENST00000480321 NEMFO60524 1076 aa15.99■□□□□ 0.15
MCF2L-225ENST00000480321 DNMBPQ6XZF7 1577 aa15.98■□□□□ 0.15
MCF2L-225ENST00000480321 ZSCAN12O43309 604 aa15.98■□□□□ 0.15
MCF2L-225ENST00000480321 MX1P20591 662 aa15.98■□□□□ 0.15
MCF2L-225ENST00000480321 RBM5P52756 815 aaKnown RBP eCLIP15.98■□□□□ 0.15
MCF2L-225ENST00000480321 ANO10Q9NW15 660 aa15.98■□□□□ 0.15
MCF2L-225ENST00000480321 NSD2O96028 1365 aa15.98■□□□□ 0.15
MCF2L-225ENST00000480321 SLC26A8Q96RN1 970 aa15.98■□□□□ 0.15
MCF2L-225ENST00000480321 PLCD4Q9BRC7 762 aa15.98■□□□□ 0.15
MCF2L-225ENST00000480321 ZRSR2Q15696 482 aaKnown RBP15.97■□□□□ 0.15
MCF2L-225ENST00000480321 UBXN4Q92575 508 aa15.97■□□□□ 0.15
MCF2L-225ENST00000480321 SYCE3A1L190 88 aa15.97■□□□□ 0.15
MCF2L-225ENST00000480321 HSP90AB3PQ58FF7 597 aa15.97■□□□□ 0.15
MCF2L-225ENST00000480321 CWC27Q6UX04 472 aaKnown RBP15.97■□□□□ 0.15
MCF2L-225ENST00000480321 MAP4K4O95819 1239 aaPredicted RBP15.96■□□□□ 0.15
MCF2L-225ENST00000480321 HMGB1P09429 215 aaKnown RBP15.96■□□□□ 0.15
MCF2L-225ENST00000480321 MCM3P25205 808 aa15.96■□□□□ 0.15
MCF2L-225ENST00000480321 ANKRD18AQ8IVF6 992 aa15.96■□□□□ 0.15
MCF2L-225ENST00000480321 PCF11O94913 1555 aaKnown RBP15.96■□□□□ 0.15
MCF2L-225ENST00000480321 SOGA3Q5TF21 947 aa15.96■□□□□ 0.15
MCF2L-225ENST00000480321 CUL7Q14999 1698 aa15.96■□□□□ 0.15
MCF2L-225ENST00000480321 CASTP20810 708 aaKnown RBP15.96■□□□□ 0.15
MCF2L-225ENST00000480321 CCDC148Q8NFR7 591 aa15.96■□□□□ 0.15
MCF2L-225ENST00000480321 BTBD11A6QL63 1104 aa15.95■□□□□ 0.14
MCF2L-225ENST00000480321 EPB41L2O43491 1005 aaKnown RBP15.95■□□□□ 0.14
MCF2L-225ENST00000480321 IMMTQ16891 758 aaKnown RBP15.95■□□□□ 0.14
MCF2L-225ENST00000480321 FKBP4Q02790 459 aaKnown RBP eCLIP15.95■□□□□ 0.14
MCF2L-225ENST00000480321 CEP126Q9P2H0 1117 aa15.95■□□□□ 0.14
MCF2L-225ENST00000480321 NUP133Q8WUM0 1156 aa15.95■□□□□ 0.14
MCF2L-225ENST00000480321 BMP2KQ9NSY1 1161 aaPredicted RBP15.95■□□□□ 0.14
MCF2L-225ENST00000480321 PTPN14Q15678 1187 aa15.95■□□□□ 0.14
MCF2L-225ENST00000480321 TMCO3Q6UWJ1 677 aa15.95■□□□□ 0.14
MCF2L-225ENST00000480321 U3KPZ7 1027 aaPredicted RBP15.95■□□□□ 0.14
MCF2L-225ENST00000480321 GNAT3A8MTJ3 354 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms