RNA–Protein interactions for RNA: ENST00000480064.1

PBRM1-220, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 919 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-220ENST00000480064 ITPKCQ96DU7 683 aa9.71□□□□□ -0.86
PBRM1-220ENST00000480064 MAGEB6P1A0A0J9YX57 407 aa9.7□□□□□ -0.86
PBRM1-220ENST00000480064 ATP9BO43861 1147 aa9.7□□□□□ -0.86
PBRM1-220ENST00000480064 GPR37L1O60883 481 aa9.7□□□□□ -0.86
PBRM1-220ENST00000480064 ERCC3P19447 782 aa9.7□□□□□ -0.86
PBRM1-220ENST00000480064 LRRN4Q8WUT4 740 aa9.7□□□□□ -0.86
PBRM1-220ENST00000480064 GPKOWQ92917 476 aaPredicted RBP eCLIP9.7□□□□□ -0.86
PBRM1-220ENST00000480064 HSP90B1P14625 803 aaKnown RBP9.69□□□□□ -0.86
PBRM1-220ENST00000480064 TRMT44Q8IYL2 757 aaKnown RBP9.69□□□□□ -0.86
PBRM1-220ENST00000480064 MAP4K5Q9Y4K4 846 aa9.69□□□□□ -0.86
PBRM1-220ENST00000480064 RBM47A0AV96 593 aaKnown RBP9.68□□□□□ -0.86
PBRM1-220ENST00000480064 VEGFBP49765 207 aa9.68□□□□□ -0.86
PBRM1-220ENST00000480064 VASH1Q7L8A9 365 aaPredicted RBP9.68□□□□□ -0.86
PBRM1-220ENST00000480064 STK17AQ9UEE5 414 aa9.68□□□□□ -0.86
PBRM1-220ENST00000480064 TBC1D9Q6ZT07 1266 aa9.67□□□□□ -0.86
PBRM1-220ENST00000480064 IRF7Q92985 503 aa9.67□□□□□ -0.86
PBRM1-220ENST00000480064 CARD14Q9BXL6 1004 aa9.67□□□□□ -0.86
PBRM1-220ENST00000480064 H3BM21 787 aa9.66□□□□□ -0.86
PBRM1-220ENST00000480064 CDK11BP21127 795 aaKnown RBP9.66□□□□□ -0.86
PBRM1-220ENST00000480064 FSHRP23945 695 aa9.66□□□□□ -0.86
PBRM1-220ENST00000480064 ELOAQ14241 798 aaKnown RBP9.66□□□□□ -0.86
PBRM1-220ENST00000480064 C6orf118Q5T5N4 469 aa9.66□□□□□ -0.86
PBRM1-220ENST00000480064 CDK11AQ9UQ88 783 aaPredicted RBP9.66□□□□□ -0.86
PBRM1-220ENST00000480064 UNCXA6NJT0 531 aa9.65□□□□□ -0.86
PBRM1-220ENST00000480064 SOBPA7XYQ1 873 aa9.65□□□□□ -0.86
PBRM1-220ENST00000480064 ERFEQ4G0M1 354 aa9.65□□□□□ -0.86
PBRM1-220ENST00000480064 PDXDC2PQ6P474 469 aa9.65□□□□□ -0.86
PBRM1-220ENST00000480064 UPP2O95045 317 aa9.64□□□□□ -0.87
PBRM1-220ENST00000480064 GMPRP36959 345 aa9.64□□□□□ -0.87
PBRM1-220ENST00000480064 TMEM164Q5U3C3 297 aa9.64□□□□□ -0.87
PBRM1-220ENST00000480064 FKBPLQ9UIM3 349 aa9.64□□□□□ -0.87
PBRM1-220ENST00000480064 BMP2P12643 396 aa9.63□□□□□ -0.87
PBRM1-220ENST00000480064 CCDC116Q8IYX3 515 aa9.63□□□□□ -0.87
PBRM1-220ENST00000480064 MEIOBQ8N635 442 aa9.63□□□□□ -0.87
PBRM1-220ENST00000480064 MRRFQ96E11 262 aaKnown RBP9.63□□□□□ -0.87
PBRM1-220ENST00000480064 ARHGAP9Q9BRR9 750 aa9.63□□□□□ -0.87
PBRM1-220ENST00000480064 NOVA2Q9UNW9 492 aaKnown RBP9.63□□□□□ -0.87
PBRM1-220ENST00000480064 EMILIN1Q9Y6C2 1016 aa9.63□□□□□ -0.87
PBRM1-220ENST00000480064 MAN1A2O60476 641 aa9.62□□□□□ -0.87
PBRM1-220ENST00000480064 ARID4AP29374 1257 aaPredicted RBP9.62□□□□□ -0.87
PBRM1-220ENST00000480064 NR6A1Q15406 480 aa9.62□□□□□ -0.87
PBRM1-220ENST00000480064 LINC00528Q8N1L1 170 aa9.62□□□□□ -0.87
PBRM1-220ENST00000480064 EPS8L1Q8TE68 723 aa9.62□□□□□ -0.87
PBRM1-220ENST00000480064 ERBB4Q15303 1308 aa9.61□□□□□ -0.87
PBRM1-220ENST00000480064 TXNDC2Q86VQ3 553 aa9.61□□□□□ -0.87
PBRM1-220ENST00000480064 STK32AQ8WU08 396 aa9.61□□□□□ -0.87
PBRM1-220ENST00000480064 ZC3H4Q9UPT8 1303 aaKnown RBP9.6□□□□□ -0.87
PBRM1-220ENST00000480064 ZBTB33Q86T24 672 aa9.6□□□□□ -0.87
PBRM1-220ENST00000480064 TSEN34Q9BSV6 310 aaKnown RBP9.6□□□□□ -0.87
PBRM1-220ENST00000480064 BCL2L13Q9BXK5 485 aa9.6□□□□□ -0.87
PBRM1-220ENST00000480064 ZMIZ1Q9ULJ6 1067 aa9.6□□□□□ -0.87
PBRM1-220ENST00000480064 USP17L3A6NCW0 530 aa9.59□□□□□ -0.87
PBRM1-220ENST00000480064 USP17L4A6NCW7 530 aa9.59□□□□□ -0.87
PBRM1-220ENST00000480064 NR1H3Q13133 447 aa9.59□□□□□ -0.87
PBRM1-220ENST00000480064 USP17L2Q6R6M4 530 aa9.59□□□□□ -0.87
PBRM1-220ENST00000480064 USP17L1Q7RTZ2 530 aa9.59□□□□□ -0.87
PBRM1-220ENST00000480064 SLC10A4Q96EP9 437 aa9.59□□□□□ -0.87
PBRM1-220ENST00000480064 CDV3Q9UKY7 258 aaKnown RBP9.59□□□□□ -0.87
PBRM1-220ENST00000480064 KANK4Q5T7N3 995 aaPredicted RBP9.58□□□□□ -0.88
PBRM1-220ENST00000480064 PPP1R26Q5T8A7 1209 aaPredicted RBP9.58□□□□□ -0.88
PBRM1-220ENST00000480064 NFATC2IPQ8NCF5 419 aa9.58□□□□□ -0.88
PBRM1-220ENST00000480064 PUS7Q96PZ0 661 aaKnown RBP9.58□□□□□ -0.88
PBRM1-220ENST00000480064 KCTD15Q96SI1 283 aaPredicted RBP9.58□□□□□ -0.88
PBRM1-220ENST00000480064 SOS2Q07890 1332 aaPredicted RBP9.57□□□□□ -0.88
PBRM1-220ENST00000480064 SKIP12755 728 aa9.57□□□□□ -0.88
PBRM1-220ENST00000480064 PTK2Q05397 1052 aa9.57□□□□□ -0.88
PBRM1-220ENST00000480064 PGPEP1Q9NXJ5 209 aa9.57□□□□□ -0.88
PBRM1-220ENST00000480064 BIN2Q9UBW5 565 aaPredicted RBP9.57□□□□□ -0.88
PBRM1-220ENST00000480064 FAM196BA6NMK8 535 aa9.56□□□□□ -0.88
PBRM1-220ENST00000480064 USP17L5A8MUK1 530 aa9.56□□□□□ -0.88
PBRM1-220ENST00000480064 USP17L15C9J2P7 530 aa9.56□□□□□ -0.88
PBRM1-220ENST00000480064 USP17L10C9JJH3 530 aa9.56□□□□□ -0.88
PBRM1-220ENST00000480064 USP17L13C9JLJ4 530 aa9.56□□□□□ -0.88
PBRM1-220ENST00000480064 USP17L12C9JPN9 530 aa9.56□□□□□ -0.88
PBRM1-220ENST00000480064 USP17L11C9JVI0 530 aa9.56□□□□□ -0.88
PBRM1-220ENST00000480064 USP17L21D6R901 530 aa9.56□□□□□ -0.88
PBRM1-220ENST00000480064 USP17L18D6R9N7 530 aa9.56□□□□□ -0.88
PBRM1-220ENST00000480064 USP17L22D6RA61 530 aa9.56□□□□□ -0.88
PBRM1-220ENST00000480064 USP17L17D6RBQ6 530 aa9.56□□□□□ -0.88
PBRM1-220ENST00000480064 USP17L19D6RCP7 530 aa9.56□□□□□ -0.88
PBRM1-220ENST00000480064 USP17L20D6RJB6 530 aa9.56□□□□□ -0.88
PBRM1-220ENST00000480064 USP17L24Q0WX57 530 aa9.56□□□□□ -0.88
PBRM1-220ENST00000480064 LARP1Q6PKG0 1096 aaKnown RBP9.56□□□□□ -0.88
PBRM1-220ENST00000480064 ZSCAN1Q8NBB4 408 aa9.56□□□□□ -0.88
PBRM1-220ENST00000480064 SIRT1Q96EB6 747 aa9.56□□□□□ -0.88
PBRM1-220ENST00000480064 BCL11AQ9H165 835 aa9.56□□□□□ -0.88
PBRM1-220ENST00000480064 FAM181BA6NEQ2 426 aa9.55□□□□□ -0.88
PBRM1-220ENST00000480064 SOWAHDA6NJG2 315 aa9.55□□□□□ -0.88
PBRM1-220ENST00000480064 MARSP56192 900 aaKnown RBP9.55□□□□□ -0.88
PBRM1-220ENST00000480064 DNAJC14Q6Y2X3 702 aaPredicted RBP9.55□□□□□ -0.88
PBRM1-220ENST00000480064 GIPC2Q8TF65 315 aa9.55□□□□□ -0.88
PBRM1-220ENST00000480064 OCSTAMPQ9BR26 566 aa9.55□□□□□ -0.88
PBRM1-220ENST00000480064 IGSF5Q9NSI5 407 aa9.55□□□□□ -0.88
PBRM1-220ENST00000480064 DNMT3LQ9UJW3 386 aa9.55□□□□□ -0.88
PBRM1-220ENST00000480064 GPSM3Q9Y4H4 160 aa9.55□□□□□ -0.88
PBRM1-220ENST00000480064 VSIG8P0DPA2 414 aa9.54□□□□□ -0.88
PBRM1-220ENST00000480064 LORP23490 312 aaPredicted RBP9.54□□□□□ -0.88
PBRM1-220ENST00000480064 DHX9Q08211 1270 aaKnown RBP9.54□□□□□ -0.88
PBRM1-220ENST00000480064 CBLBQ13191 982 aa9.54□□□□□ -0.88
PBRM1-220ENST00000480064 Q6ZVU0 165 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms