RNA–Protein interactions for RNA: ENST00000480020.5

HPS1-212, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 5

Gene HPS1, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-212ENST00000480020 TNS1Q9HBL0 1735 aaKnown RBP16.82■□□□□ 0.28
HPS1-212ENST00000480020 DDX54Q8TDD1 881 aaKnown RBP16.82■□□□□ 0.28
HPS1-212ENST00000480020 SHANK3Q9BYB0 1731 aa16.82■□□□□ 0.28
HPS1-212ENST00000480020 ZNF316A6NFI3 1004 aaPredicted RBP16.81■□□□□ 0.28
HPS1-212ENST00000480020 PTF1AQ7RTS3 328 aa16.81■□□□□ 0.28
HPS1-212ENST00000480020 AEBP1Q8IUX7 1158 aa16.81■□□□□ 0.28
HPS1-212ENST00000480020 KDRP35968 1356 aa16.8■□□□□ 0.28
HPS1-212ENST00000480020 DIAPH1O60610 1272 aaKnown RBP16.8■□□□□ 0.28
HPS1-212ENST00000480020 PLEKHG2Q9H7P9 1386 aa16.79■□□□□ 0.28
HPS1-212ENST00000480020 BAG6P46379 1132 aa16.79■□□□□ 0.28
HPS1-212ENST00000480020 BCL11BQ9C0K0 894 aaPredicted RBP16.79■□□□□ 0.28
HPS1-212ENST00000480020 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.79■□□□□ 0.28
HPS1-212ENST00000480020 PKD1L3Q7Z443 1732 aa16.79■□□□□ 0.28
HPS1-212ENST00000480020 PCDH11XQ9BZA7 1347 aa16.78■□□□□ 0.28
HPS1-212ENST00000480020 PCDH11YQ9BZA8 1340 aa16.78■□□□□ 0.28
HPS1-212ENST00000480020 SBF2Q86WG5 1849 aa16.78■□□□□ 0.28
HPS1-212ENST00000480020 CYP27B1O15528 508 aa16.78■□□□□ 0.28
HPS1-212ENST00000480020 APBA3O96018 575 aa16.78■□□□□ 0.28
HPS1-212ENST00000480020 SULT6B1Q6IMI4 303 aa16.78■□□□□ 0.28
HPS1-212ENST00000480020 KCNQ2O43526 872 aa16.77■□□□□ 0.28
HPS1-212ENST00000480020 EN1Q05925 392 aaPredicted RBP16.77■□□□□ 0.28
HPS1-212ENST00000480020 ACSBG1Q96GR2 724 aa16.77■□□□□ 0.28
HPS1-212ENST00000480020 SPG7Q9UQ90 795 aa16.77■□□□□ 0.28
HPS1-212ENST00000480020 RALBP1Q15311 655 aa16.76■□□□□ 0.27
HPS1-212ENST00000480020 CFAP53Q96M91 514 aa16.76■□□□□ 0.27
HPS1-212ENST00000480020 CAMKK2Q96RR4 588 aa16.76■□□□□ 0.27
HPS1-212ENST00000480020 NHSQ6T4R5 1651 aa16.75■□□□□ 0.27
HPS1-212ENST00000480020 HMOX1P09601 288 aa16.74■□□□□ 0.27
HPS1-212ENST00000480020 EZH2Q15910 746 aaKnown RBP16.74■□□□□ 0.27
HPS1-212ENST00000480020 NKX1-1Q15270 411 aaPredicted RBP16.73■□□□□ 0.27
HPS1-212ENST00000480020 PLEKHO1Q53GL0 409 aaPredicted RBP16.73■□□□□ 0.27
HPS1-212ENST00000480020 U2SURPO15042 1029 aaKnown RBP16.72■□□□□ 0.27
HPS1-212ENST00000480020 PLSCR1O15162 318 aa16.72■□□□□ 0.27
HPS1-212ENST00000480020 PHKG2P15735 406 aa16.72■□□□□ 0.27
HPS1-212ENST00000480020 PRIM1P49642 420 aaKnown RBP16.72■□□□□ 0.27
HPS1-212ENST00000480020 AMOTQ4VCS5 1084 aa16.72■□□□□ 0.27
HPS1-212ENST00000480020 DOT1LQ8TEK3 1739 aa16.71■□□□□ 0.27
HPS1-212ENST00000480020 IFNL2Q8IZJ0 200 aa16.71■□□□□ 0.27
HPS1-212ENST00000480020 ZNF530Q6P9A1 599 aaPredicted RBP16.7■□□□□ 0.26
HPS1-212ENST00000480020 NUDCQ9Y266 331 aa16.7■□□□□ 0.26
HPS1-212ENST00000480020 MYBBP1AQ9BQG0 1328 aaKnown RBP16.7■□□□□ 0.26
HPS1-212ENST00000480020 SYTL4Q96C24 671 aaPredicted RBP16.69■□□□□ 0.26
HPS1-212ENST00000480020 PRKRIP1Q9H875 184 aaPredicted RBP16.69■□□□□ 0.26
HPS1-212ENST00000480020 RGPD3A6NKT7 1758 aaPredicted RBP16.69■□□□□ 0.26
HPS1-212ENST00000480020 RGPD4Q7Z3J3 1758 aa16.69■□□□□ 0.26
HPS1-212ENST00000480020 BTAF1O14981 1849 aa16.68■□□□□ 0.26
HPS1-212ENST00000480020 TOGARAM1Q9Y4F4 1720 aa16.68■□□□□ 0.26
HPS1-212ENST00000480020 PROM2Q8N271 834 aa16.68■□□□□ 0.26
HPS1-212ENST00000480020 RREB1Q92766 1687 aa16.68■□□□□ 0.26
HPS1-212ENST00000480020 U2AF1L5P0DN76 240 aaPredicted RBP16.67■□□□□ 0.26
HPS1-212ENST00000480020 U2AF1Q01081 240 aaKnown RBP eCLIP16.67■□□□□ 0.26
HPS1-212ENST00000480020 RSPH6AQ9H0K4 717 aa16.67■□□□□ 0.26
HPS1-212ENST00000480020 KDM6AO15550 1401 aaPredicted RBP16.66■□□□□ 0.26
HPS1-212ENST00000480020 KAT6BQ8WYB5 2073 aa16.66■□□□□ 0.26
HPS1-212ENST00000480020 HSP90AB1P08238 724 aaKnown RBP16.65■□□□□ 0.26
HPS1-212ENST00000480020 PRKAR2BP31323 418 aa16.65■□□□□ 0.26
HPS1-212ENST00000480020 TXNRD1Q16881 649 aa16.65■□□□□ 0.26
HPS1-212ENST00000480020 MTHFSDQ2M296 383 aaKnown RBP16.65■□□□□ 0.26
HPS1-212ENST00000480020 C1orf141Q5JVX7 400 aa16.65■□□□□ 0.26
HPS1-212ENST00000480020 DCAF5Q96JK2 942 aa16.65■□□□□ 0.26
HPS1-212ENST00000480020 NUP188Q5SRE5 1749 aa16.65■□□□□ 0.26
HPS1-212ENST00000480020 MPRIPQ6WCQ1 1025 aa16.64■□□□□ 0.25
HPS1-212ENST00000480020 PIGBQ92521 554 aa16.64■□□□□ 0.25
HPS1-212ENST00000480020 FCHSD2O94868 740 aa16.63■□□□□ 0.25
HPS1-212ENST00000480020 AKAP4Q5JQC9 854 aa16.63■□□□□ 0.25
HPS1-212ENST00000480020 PHACTR3Q96KR7 559 aa16.63■□□□□ 0.25
HPS1-212ENST00000480020 ERVV-2B6SEH9 535 aa16.62■□□□□ 0.25
HPS1-212ENST00000480020 TMOD3Q9NYL9 352 aa16.61■□□□□ 0.25
HPS1-212ENST00000480020 ITGB4P16144 1822 aa16.61■□□□□ 0.25
HPS1-212ENST00000480020 GAS2L2Q8NHY3 880 aa16.6■□□□□ 0.25
HPS1-212ENST00000480020 ANO8Q9HCE9 1232 aaPredicted RBP16.6■□□□□ 0.25
HPS1-212ENST00000480020 LRRC4BQ9NT99 713 aa16.6■□□□□ 0.25
HPS1-212ENST00000480020 PALLDQ8WX93 1383 aa16.6■□□□□ 0.25
HPS1-212ENST00000480020 SLC27A3Q5K4L6 730 aa16.59■□□□□ 0.25
HPS1-212ENST00000480020 LGR6Q9HBX8 967 aa16.59■□□□□ 0.25
HPS1-212ENST00000480020 RNMTO43148 476 aaKnown RBP16.58■□□□□ 0.24
HPS1-212ENST00000480020 CABP4P57796 275 aa16.58■□□□□ 0.24
HPS1-212ENST00000480020 R3HDM1Q15032 1099 aaKnown RBP16.58■□□□□ 0.24
HPS1-212ENST00000480020 NBPF14Q5TI25 921 aa16.58■□□□□ 0.24
HPS1-212ENST00000480020 SMARCC1Q92922 1105 aaPredicted RBP16.58■□□□□ 0.24
HPS1-212ENST00000480020 PLEKHF1Q96S99 279 aa16.58■□□□□ 0.24
HPS1-212ENST00000480020 MAP3K5Q99683 1374 aa16.58■□□□□ 0.24
HPS1-212ENST00000480020 LY75O60449 1722 aa16.57■□□□□ 0.24
HPS1-212ENST00000480020 ADAMTS7Q9UKP4 1686 aa16.57■□□□□ 0.24
HPS1-212ENST00000480020 PAPPAQ13219 1627 aa16.57■□□□□ 0.24
HPS1-212ENST00000480020 MRC1P22897 1456 aa16.57■□□□□ 0.24
HPS1-212ENST00000480020 PSDA5PKW4 1024 aaPredicted RBP16.57■□□□□ 0.24
HPS1-212ENST00000480020 KCNQ4P56696 695 aa16.57■□□□□ 0.24
HPS1-212ENST00000480020 ATG3Q9NT62 314 aa16.57■□□□□ 0.24
HPS1-212ENST00000480020 ASAP1Q9ULH1 1129 aa16.57■□□□□ 0.24
HPS1-212ENST00000480020 GNAT3A8MTJ3 354 aa16.56■□□□□ 0.24
HPS1-212ENST00000480020 CCNL1Q9UK58 526 aaPredicted RBP16.56■□□□□ 0.24
HPS1-212ENST00000480020 SCN11AQ9UI33 1791 aa16.56■□□□□ 0.24
HPS1-212ENST00000480020 ANP32CO43423 234 aa16.55■□□□□ 0.24
HPS1-212ENST00000480020 NFATC2IPQ8NCF5 419 aa16.55■□□□□ 0.24
HPS1-212ENST00000480020 SLC52A2Q9HAB3 445 aa16.55■□□□□ 0.24
HPS1-212ENST00000480020 IL17REQ8NFR9 667 aa16.54■□□□□ 0.24
HPS1-212ENST00000480020 SLC15A2Q16348 729 aa16.53■□□□□ 0.24
HPS1-212ENST00000480020 ZNF827Q17R98 1081 aa16.53■□□□□ 0.24
HPS1-212ENST00000480020 CCDC184Q52MB2 194 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms