RNA–Protein interactions for RNA: ENST00000479782.1

RPP40-205, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5

Gene RPP40, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-205ENST00000479782 WDR63Q8IWG1 891 aa18.6■□□□□ 0.57
RPP40-205ENST00000479782 NGLY1Q96IV0 654 aa18.6■□□□□ 0.57
RPP40-205ENST00000479782 C8orf37Q96NL8 207 aa18.6■□□□□ 0.57
RPP40-205ENST00000479782 MEGF6O75095 1541 aa18.59■□□□□ 0.57
RPP40-205ENST00000479782 WNK3Q9BYP7 1800 aa18.59■□□□□ 0.57
RPP40-205ENST00000479782 GOLGA2Q08379 1002 aa18.59■□□□□ 0.57
RPP40-205ENST00000479782 MEX3CQ5U5Q3 659 aaKnown RBP18.59■□□□□ 0.57
RPP40-205ENST00000479782 FNBP4Q8N3X1 1017 aaPredicted RBP18.59■□□□□ 0.57
RPP40-205ENST00000479782 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.59■□□□□ 0.57
RPP40-205ENST00000479782 TRIM35Q9UPQ4 493 aa18.59■□□□□ 0.57
RPP40-205ENST00000479782 OVOS2A0A0G2JMS6 1433 aa18.58■□□□□ 0.57
RPP40-205ENST00000479782 UNC5CLQ8IV45 518 aa18.58■□□□□ 0.56
RPP40-205ENST00000479782 BCL9LQ86UU0 1499 aa18.58■□□□□ 0.56
RPP40-205ENST00000479782 HTATSF1O43719 755 aaKnown RBP18.57■□□□□ 0.56
RPP40-205ENST00000479782 MAP3K5Q99683 1374 aa18.56■□□□□ 0.56
RPP40-205ENST00000479782 IL2RBP14784 551 aa18.56■□□□□ 0.56
RPP40-205ENST00000479782 CALD1Q05682 793 aaKnown RBP18.56■□□□□ 0.56
RPP40-205ENST00000479782 SPG7Q9UQ90 795 aa18.56■□□□□ 0.56
RPP40-205ENST00000479782 THRAP3Q9Y2W1 955 aaKnown RBP18.56■□□□□ 0.56
RPP40-205ENST00000479782 IL16Q14005 1332 aa18.55■□□□□ 0.56
RPP40-205ENST00000479782 GNAT3A8MTJ3 354 aa18.55■□□□□ 0.56
RPP40-205ENST00000479782 RTF1Q92541 710 aaKnown RBP18.55■□□□□ 0.56
RPP40-205ENST00000479782 SPATA31A1Q5TZJ5 1347 aa18.54■□□□□ 0.56
RPP40-205ENST00000479782 LRRC37A3O60309 1634 aa18.54■□□□□ 0.56
RPP40-205ENST00000479782 E9PSI1 815 aa18.54■□□□□ 0.56
RPP40-205ENST00000479782 VPS72Q15906 364 aa18.54■□□□□ 0.56
RPP40-205ENST00000479782 ZNF530Q6P9A1 599 aaPredicted RBP18.54■□□□□ 0.56
RPP40-205ENST00000479782 DISP2A7MBM2 1401 aa18.54■□□□□ 0.56
RPP40-205ENST00000479782 SPATA31A5Q5VU36 1347 aa18.53■□□□□ 0.56
RPP40-205ENST00000479782 SPATA31A7Q8IWB4 1347 aa18.53■□□□□ 0.56
RPP40-205ENST00000479782 AKAP4Q5JQC9 854 aa18.53■□□□□ 0.56
RPP40-205ENST00000479782 C1orf141Q5JVX7 400 aa18.53■□□□□ 0.56
RPP40-205ENST00000479782 CDCA7Q9BWT1 371 aaPredicted RBP18.53■□□□□ 0.56
RPP40-205ENST00000479782 USP21Q9UK80 565 aa18.53■□□□□ 0.56
RPP40-205ENST00000479782 SLFN5Q08AF3 891 aa18.52■□□□□ 0.56
RPP40-205ENST00000479782 USP35Q9P2H5 1018 aa18.52■□□□□ 0.56
RPP40-205ENST00000479782 ADAMTS7Q9UKP4 1686 aa18.51■□□□□ 0.55
RPP40-205ENST00000479782 TRMT2AQ8IZ69 625 aaKnown RBP18.51■□□□□ 0.55
RPP40-205ENST00000479782 CDCA7LQ96GN5 454 aa18.51■□□□□ 0.55
RPP40-205ENST00000479782 SHANK3Q9BYB0 1731 aa18.51■□□□□ 0.55
RPP40-205ENST00000479782 AFF2P51816 1311 aa18.5■□□□□ 0.55
RPP40-205ENST00000479782 PCDH11XQ9BZA7 1347 aa18.5■□□□□ 0.55
RPP40-205ENST00000479782 PCDH11YQ9BZA8 1340 aa18.5■□□□□ 0.55
RPP40-205ENST00000479782 BARGINQ6ZT62 677 aa18.5■□□□□ 0.55
RPP40-205ENST00000479782 ZCRB1Q8TBF4 217 aaKnown RBP18.5■□□□□ 0.55
RPP40-205ENST00000479782 MYH16Q9H6N6 1097 aa18.5■□□□□ 0.55
RPP40-205ENST00000479782 VIRMAQ69YN4 1812 aaKnown RBP18.5■□□□□ 0.55
RPP40-205ENST00000479782 IFNL2Q8IZJ0 200 aa18.49■□□□□ 0.55
RPP40-205ENST00000479782 CCDC9Q9Y3X0 531 aaKnown RBP18.49■□□□□ 0.55
RPP40-205ENST00000479782 CEMIPQ8WUJ3 1361 aa18.48■□□□□ 0.55
RPP40-205ENST00000479782 PHKG2P15735 406 aa18.48■□□□□ 0.55
RPP40-205ENST00000479782 DUSP27Q5VZP5 1158 aa18.48■□□□□ 0.55
RPP40-205ENST00000479782 MCM10Q7L590 875 aa18.48■□□□□ 0.55
RPP40-205ENST00000479782 SPINK5Q9NQ38 1064 aaPredicted RBP18.48■□□□□ 0.55
RPP40-205ENST00000479782 IFT57Q9NWB7 429 aa18.48■□□□□ 0.55
RPP40-205ENST00000479782 SCN11AQ9UI33 1791 aa18.47■□□□□ 0.55
RPP40-205ENST00000479782 HSP90AB1P08238 724 aaKnown RBP18.47■□□□□ 0.55
RPP40-205ENST00000479782 GNAI1P63096 354 aa18.47■□□□□ 0.55
RPP40-205ENST00000479782 DCTN1Q14203 1278 aa18.47■□□□□ 0.55
RPP40-205ENST00000479782 ATRNO75882 1429 aa18.47■□□□□ 0.55
RPP40-205ENST00000479782 TNS2Q63HR2 1409 aa18.47■□□□□ 0.55
RPP40-205ENST00000479782 CFAP44Q96MT7 982 aa18.46■□□□□ 0.55
RPP40-205ENST00000479782 THUMPD2Q9BTF0 503 aaKnown RBP18.46■□□□□ 0.55
RPP40-205ENST00000479782 CYP27B1O15528 508 aa18.45■□□□□ 0.54
RPP40-205ENST00000479782 ZNF853P0CG23 659 aa18.45■□□□□ 0.54
RPP40-205ENST00000479782 IL17REQ8NFR9 667 aa18.45■□□□□ 0.54
RPP40-205ENST00000479782 TRPC5Q9UL62 973 aaPredicted RBP18.45■□□□□ 0.54
RPP40-205ENST00000479782 GLI3P10071 1580 aa18.44■□□□□ 0.54
RPP40-205ENST00000479782 EXOC5O00471 708 aa18.44■□□□□ 0.54
RPP40-205ENST00000479782 RNMTO43148 476 aaKnown RBP18.44■□□□□ 0.54
RPP40-205ENST00000479782 DCAF5Q96JK2 942 aa18.44■□□□□ 0.54
RPP40-205ENST00000479782 BABAM1Q9NWV8 329 aa18.44■□□□□ 0.54
RPP40-205ENST00000479782 SIPA1L3O60292 1781 aaPredicted RBP18.43■□□□□ 0.54
RPP40-205ENST00000479782 MPRIPQ6WCQ1 1025 aa18.43■□□□□ 0.54
RPP40-205ENST00000479782 MRC1P22897 1456 aa18.43■□□□□ 0.54
RPP40-205ENST00000479782 THSD7AQ9UPZ6 1657 aa18.43■□□□□ 0.54
RPP40-205ENST00000479782 FANCIQ9NVI1 1328 aa18.43■□□□□ 0.54
RPP40-205ENST00000479782 KDM6AO15550 1401 aaPredicted RBP18.42■□□□□ 0.54
RPP40-205ENST00000479782 NKX1-1Q15270 411 aaPredicted RBP18.42■□□□□ 0.54
RPP40-205ENST00000479782 GJD4Q96KN9 370 aaPredicted RBP18.42■□□□□ 0.54
RPP40-205ENST00000479782 LGR6Q9HBX8 967 aa18.42■□□□□ 0.54
RPP40-205ENST00000479782 CHL1O00533 1208 aa18.41■□□□□ 0.54
RPP40-205ENST00000479782 TEFQ10587 303 aa18.41■□□□□ 0.54
RPP40-205ENST00000479782 TAF7Q15545 349 aaPredicted RBP18.41■□□□□ 0.54
RPP40-205ENST00000479782 DDB1Q16531 1140 aa18.41■□□□□ 0.54
RPP40-205ENST00000479782 ZNF772Q68DY9 489 aaPredicted RBP18.41■□□□□ 0.54
RPP40-205ENST00000479782 LAS1LQ9Y4W2 734 aaKnown RBP18.41■□□□□ 0.54
RPP40-205ENST00000479782 FAM98CQ17RN3 349 aaKnown RBP18.4■□□□□ 0.54
RPP40-205ENST00000479782 DDX54Q8TDD1 881 aaKnown RBP18.4■□□□□ 0.54
RPP40-205ENST00000479782 TSR2Q969E8 191 aaKnown RBP18.4■□□□□ 0.54
RPP40-205ENST00000479782 MBIPQ9NS73 344 aa18.4■□□□□ 0.54
RPP40-205ENST00000479782 CT47B1P0C2W7 299 aaPredicted RBP18.39■□□□□ 0.53
RPP40-205ENST00000479782 QTRT2Q9H974 415 aaKnown RBP18.39■□□□□ 0.53
RPP40-205ENST00000479782 KDM3BQ7LBC6 1761 aa18.39■□□□□ 0.53
RPP40-205ENST00000479782 ERVV-2B6SEH9 535 aa18.37■□□□□ 0.53
RPP40-205ENST00000479782 SLC52A2Q9HAB3 445 aa18.37■□□□□ 0.53
RPP40-205ENST00000479782 TSPYL4Q9UJ04 414 aa18.37■□□□□ 0.53
RPP40-205ENST00000479782 TOGARAM1Q9Y4F4 1720 aa18.37■□□□□ 0.53
RPP40-205ENST00000479782 ONECUT3O60422 494 aaPredicted RBP18.36■□□□□ 0.53
RPP40-205ENST00000479782 MSH5O43196 834 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms