RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 IP6K1Q92551 441 aa12.49□□□□□ -0.41
CMTM1-208ENST00000479381 KAT6BQ8WYB5 2073 aa12.49□□□□□ -0.41
CMTM1-208ENST00000479381 PSDA5PKW4 1024 aaPredicted RBP12.48□□□□□ -0.41
CMTM1-208ENST00000479381 FYB1O15117 783 aa12.48□□□□□ -0.41
CMTM1-208ENST00000479381 HOXC9P31274 260 aa12.48□□□□□ -0.41
CMTM1-208ENST00000479381 TNNT2P45379 298 aaPredicted RBP12.48□□□□□ -0.41
CMTM1-208ENST00000479381 FXR2P51116 673 aaKnown RBP eCLIP12.48□□□□□ -0.41
CMTM1-208ENST00000479381 EZH2Q15910 746 aaKnown RBP12.48□□□□□ -0.41
CMTM1-208ENST00000479381 TNS1Q9HBL0 1735 aaKnown RBP12.48□□□□□ -0.41
CMTM1-208ENST00000479381 FAM208AQ9UK61 1670 aaKnown RBP12.47□□□□□ -0.41
CMTM1-208ENST00000479381 EP400Q96L91 3159 aa12.46□□□□□ -0.41
CMTM1-208ENST00000479381 NBPF14Q5TI25 921 aa12.46□□□□□ -0.41
CMTM1-208ENST00000479381 TNS2Q63HR2 1409 aa12.45□□□□□ -0.42
CMTM1-208ENST00000479381 RTL1A6NKG5 1358 aa12.45□□□□□ -0.42
CMTM1-208ENST00000479381 CNGB1Q14028 1251 aaPredicted RBP12.45□□□□□ -0.42
CMTM1-208ENST00000479381 DDX54Q8TDD1 881 aaKnown RBP12.45□□□□□ -0.42
CMTM1-208ENST00000479381 ACSBG1Q96GR2 724 aa12.45□□□□□ -0.42
CMTM1-208ENST00000479381 USHBP1Q8N6Y0 703 aa12.44□□□□□ -0.42
CMTM1-208ENST00000479381 RAPGEF4Q8WZA2 1011 aa12.44□□□□□ -0.42
CMTM1-208ENST00000479381 SYTL4Q96C24 671 aaPredicted RBP12.44□□□□□ -0.42
CMTM1-208ENST00000479381 PANK3Q9H999 370 aa12.44□□□□□ -0.42
CMTM1-208ENST00000479381 FLT4P35916 1363 aa12.43□□□□□ -0.42
CMTM1-208ENST00000479381 PRKAR2AP13861 404 aaKnown RBP12.43□□□□□ -0.42
CMTM1-208ENST00000479381 R3HDM1Q15032 1099 aaKnown RBP12.43□□□□□ -0.42
CMTM1-208ENST00000479381 MARCH10Q8NA82 808 aaPredicted RBP12.43□□□□□ -0.42
CMTM1-208ENST00000479381 CARD14Q9BXL6 1004 aa12.43□□□□□ -0.42
CMTM1-208ENST00000479381 KNSTRNQ9Y448 316 aa12.43□□□□□ -0.42
CMTM1-208ENST00000479381 TATP17735 454 aaPredicted RBP12.42□□□□□ -0.42
CMTM1-208ENST00000479381 BCL11BQ9C0K0 894 aaPredicted RBP12.42□□□□□ -0.42
CMTM1-208ENST00000479381 EMILIN1Q9Y6C2 1016 aa12.42□□□□□ -0.42
CMTM1-208ENST00000479381 RGPD2P0DJD1 1756 aa12.42□□□□□ -0.42
CMTM1-208ENST00000479381 DISP2A7MBM2 1401 aa12.42□□□□□ -0.42
CMTM1-208ENST00000479381 PARD3Q8TEW0 1356 aa12.42□□□□□ -0.42
CMTM1-208ENST00000479381 HSP90AB2PQ58FF8 381 aa12.41□□□□□ -0.42
CMTM1-208ENST00000479381 MORC1Q86VD1 984 aa12.41□□□□□ -0.42
CMTM1-208ENST00000479381 SBF2Q86WG5 1849 aa12.4□□□□□ -0.42
CMTM1-208ENST00000479381 PROM2Q8N271 834 aa12.4□□□□□ -0.42
CMTM1-208ENST00000479381 ANKRD26Q9UPS8 1709 aa12.4□□□□□ -0.43
CMTM1-208ENST00000479381 MAP2P11137 1827 aaKnown RBP12.39□□□□□ -0.43
CMTM1-208ENST00000479381 ZCRB1Q8TBF4 217 aaKnown RBP12.39□□□□□ -0.43
CMTM1-208ENST00000479381 CAMKK2Q96RR4 588 aa12.39□□□□□ -0.43
CMTM1-208ENST00000479381 INSRP06213 1382 aa12.39□□□□□ -0.43
CMTM1-208ENST00000479381 PEAK1Q9H792 1746 aa12.39□□□□□ -0.43
CMTM1-208ENST00000479381 NBPF6Q5VWK0 638 aa12.38□□□□□ -0.43
CMTM1-208ENST00000479381 NBPF4Q96M43 638 aa12.38□□□□□ -0.43
CMTM1-208ENST00000479381 KIF7Q2M1P5 1343 aa12.37□□□□□ -0.43
CMTM1-208ENST00000479381 NSD2O96028 1365 aa12.37□□□□□ -0.43
CMTM1-208ENST00000479381 KIF24Q5T7B8 1368 aa12.37□□□□□ -0.43
CMTM1-208ENST00000479381 NUP188Q5SRE5 1749 aa12.37□□□□□ -0.43
CMTM1-208ENST00000479381 NHSQ6T4R5 1651 aa12.36□□□□□ -0.43
CMTM1-208ENST00000479381 RREB1Q92766 1687 aa12.36□□□□□ -0.43
CMTM1-208ENST00000479381 KCNQ2O43526 872 aa12.36□□□□□ -0.43
CMTM1-208ENST00000479381 STK32BQ9NY57 414 aa12.36□□□□□ -0.43
CMTM1-208ENST00000479381 MEGF6O75095 1541 aa12.36□□□□□ -0.43
CMTM1-208ENST00000479381 CHADLQ6NUI6 762 aa12.35□□□□□ -0.43
CMTM1-208ENST00000479381 PTF1AQ7RTS3 328 aa12.35□□□□□ -0.43
CMTM1-208ENST00000479381 PPP1R1BQ9UD71 204 aaPredicted RBP12.35□□□□□ -0.43
CMTM1-208ENST00000479381 PCDH11XQ9BZA7 1347 aa12.35□□□□□ -0.43
CMTM1-208ENST00000479381 PCDH11YQ9BZA8 1340 aa12.35□□□□□ -0.43
CMTM1-208ENST00000479381 DOT1LQ8TEK3 1739 aa12.34□□□□□ -0.43
CMTM1-208ENST00000479381 PLSCR1O15162 318 aa12.34□□□□□ -0.43
CMTM1-208ENST00000479381 TXNRD1Q16881 649 aa12.34□□□□□ -0.43
CMTM1-208ENST00000479381 CC2D1BQ5T0F9 858 aaKnown RBP12.34□□□□□ -0.43
CMTM1-208ENST00000479381 BTAF1O14981 1849 aa12.33□□□□□ -0.44
CMTM1-208ENST00000479381 POLKQ9UBT6 870 aa12.33□□□□□ -0.44
CMTM1-208ENST00000479381 SPG7Q9UQ90 795 aa12.33□□□□□ -0.44
CMTM1-208ENST00000479381 WASHC2AQ641Q2 1341 aa12.33□□□□□ -0.44
CMTM1-208ENST00000479381 RGPD3A6NKT7 1758 aaPredicted RBP12.33□□□□□ -0.44
CMTM1-208ENST00000479381 RGPD4Q7Z3J3 1758 aa12.33□□□□□ -0.44
CMTM1-208ENST00000479381 BCL9O00512 1426 aa12.32□□□□□ -0.44
CMTM1-208ENST00000479381 PRIM1P49642 420 aaKnown RBP12.32□□□□□ -0.44
CMTM1-208ENST00000479381 EIF4A2Q14240 407 aaKnown RBP12.31□□□□□ -0.44
CMTM1-208ENST00000479381 MPRIPQ6WCQ1 1025 aa12.3□□□□□ -0.44
CMTM1-208ENST00000479381 EYA1Q99502 592 aa12.3□□□□□ -0.44
CMTM1-208ENST00000479381 ANO8Q9HCE9 1232 aaPredicted RBP12.29□□□□□ -0.44
CMTM1-208ENST00000479381 SHANK3Q9BYB0 1731 aa12.28□□□□□ -0.44
CMTM1-208ENST00000479381 HAX1O00165 279 aa12.28□□□□□ -0.44
CMTM1-208ENST00000479381 SPON1Q9HCB6 807 aa12.28□□□□□ -0.44
CMTM1-208ENST00000479381 CCNL1Q9UK58 526 aaPredicted RBP12.28□□□□□ -0.44
CMTM1-208ENST00000479381 LRP5O75197 1615 aa12.28□□□□□ -0.44
CMTM1-208ENST00000479381 ZBTB7AO95365 584 aa12.27□□□□□ -0.45
CMTM1-208ENST00000479381 SLC15A2Q16348 729 aa12.27□□□□□ -0.45
CMTM1-208ENST00000479381 PLEKHO1Q53GL0 409 aaPredicted RBP12.27□□□□□ -0.45
CMTM1-208ENST00000479381 C1orf141Q5JVX7 400 aa12.27□□□□□ -0.45
CMTM1-208ENST00000479381 SLC27A3Q5K4L6 730 aa12.26□□□□□ -0.45
CMTM1-208ENST00000479381 IFNL2Q8IZJ0 200 aa12.26□□□□□ -0.45
CMTM1-208ENST00000479381 KLHL34Q8N239 644 aa12.26□□□□□ -0.45
CMTM1-208ENST00000479381 TMOD3Q9NYL9 352 aa12.26□□□□□ -0.45
CMTM1-208ENST00000479381 FBXO3Q9UK99 471 aa12.26□□□□□ -0.45
CMTM1-208ENST00000479381 MTHFSP49914 203 aa12.25□□□□□ -0.45
CMTM1-208ENST00000479381 KCNQ4P56696 695 aa12.25□□□□□ -0.45
CMTM1-208ENST00000479381 AMER1Q5JTC6 1135 aaPredicted RBP12.25□□□□□ -0.45
CMTM1-208ENST00000479381 SULT6B1Q6IMI4 303 aa12.25□□□□□ -0.45
CMTM1-208ENST00000479381 ZNF530Q6P9A1 599 aaPredicted RBP12.25□□□□□ -0.45
CMTM1-208ENST00000479381 TFCP2L1Q9NZI6 479 aa12.25□□□□□ -0.45
CMTM1-208ENST00000479381 PKD1L3Q7Z443 1732 aa12.25□□□□□ -0.45
CMTM1-208ENST00000479381 U2SURPO15042 1029 aaKnown RBP12.24□□□□□ -0.45
CMTM1-208ENST00000479381 CYP27B1O15528 508 aa12.24□□□□□ -0.45
CMTM1-208ENST00000479381 CFAP53Q96M91 514 aa12.24□□□□□ -0.45
CMTM1-208ENST00000479381 PALLDQ8WX93 1383 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms