RNA–Protein interactions for RNA: ENST00000479336.1

EPB41L1-217, Transcript of erythrocyte membrane protein band 4.1 like 1, humanhuman

TSL 3

Gene EPB41L1, Length 846 nt, Biotype processed transcript, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L1-217ENST00000479336 NSD2O96028 1365 aa18.08■□□□□ 0.49
EPB41L1-217ENST00000479336 USP31Q70CQ4 1352 aa18.08■□□□□ 0.49
EPB41L1-217ENST00000479336 DDX54Q8TDD1 881 aaKnown RBP18.08■□□□□ 0.48
EPB41L1-217ENST00000479336 ZNF692Q9BU19 519 aaPredicted RBP18.08■□□□□ 0.48
EPB41L1-217ENST00000479336 YBX3P16989 372 aaKnown RBP eCLIP18.07■□□□□ 0.485e-7■■■■□ 20.1
EPB41L1-217ENST00000479336 UBR3Q6ZT12 1888 aa18.06■□□□□ 0.48
EPB41L1-217ENST00000479336 MEGF6O75095 1541 aa18.06■□□□□ 0.48
EPB41L1-217ENST00000479336 SYTL4Q96C24 671 aaPredicted RBP18.05■□□□□ 0.48
EPB41L1-217ENST00000479336 SLC12A5Q9H2X9 1139 aa18.05■□□□□ 0.48
EPB41L1-217ENST00000479336 A0A1W2PP64 1363 aa18.04■□□□□ 0.48
EPB41L1-217ENST00000479336 MSL1Q68DK7 614 aa18.04■□□□□ 0.48
EPB41L1-217ENST00000479336 TMC1Q8TDI8 760 aa18.04■□□□□ 0.48
EPB41L1-217ENST00000479336 KIF20BQ96Q89 1820 aa18.03■□□□□ 0.48
EPB41L1-217ENST00000479336 GIGYF1O75420 1035 aaPredicted RBP18.03■□□□□ 0.48
EPB41L1-217ENST00000479336 PRIM1P49642 420 aaKnown RBP18.02■□□□□ 0.48
EPB41L1-217ENST00000479336 WWC3Q9ULE0 1092 aa18.02■□□□□ 0.48
EPB41L1-217ENST00000479336 TFCP2L1Q9NZI6 479 aa18.01■□□□□ 0.47
EPB41L1-217ENST00000479336 EDC4Q6P2E9 1401 aaKnown RBP18■□□□□ 0.47
EPB41L1-217ENST00000479336 N4BP2Q86UW6 1770 aaPredicted RBP17.99■□□□□ 0.47
EPB41L1-217ENST00000479336 C4BP0C0L5 1744 aa17.99■□□□□ 0.47
EPB41L1-217ENST00000479336 SMIM5Q71RC9 77 aa17.99■□□□□ 0.47
EPB41L1-217ENST00000479336 USHBP1Q8N6Y0 703 aa17.99■□□□□ 0.47
EPB41L1-217ENST00000479336 ATP10DQ9P241 1426 aa17.98■□□□□ 0.47
EPB41L1-217ENST00000479336 MSH5O43196 834 aa17.98■□□□□ 0.47
EPB41L1-217ENST00000479336 POLD1P28340 1107 aa17.98■□□□□ 0.47
EPB41L1-217ENST00000479336 COL23A1Q86Y22 540 aaPredicted RBP17.98■□□□□ 0.47
EPB41L1-217ENST00000479336 ANKRD36BQ8N2N9 1353 aa17.98■□□□□ 0.47
EPB41L1-217ENST00000479336 MAP2P11137 1827 aaKnown RBP17.98■□□□□ 0.47
EPB41L1-217ENST00000479336 KIAA1551Q9HCM1 1747 aa17.96■□□□□ 0.47
EPB41L1-217ENST00000479336 IP6K1Q92551 441 aa17.96■□□□□ 0.47
EPB41L1-217ENST00000479336 MAP3K19Q56UN5 1328 aa17.96■□□□□ 0.46
EPB41L1-217ENST00000479336 SLC27A3Q5K4L6 730 aa17.95■□□□□ 0.46
EPB41L1-217ENST00000479336 AMIGO3Q86WK7 504 aa17.95■□□□□ 0.46
EPB41L1-217ENST00000479336 ZNF526Q8TF50 670 aaPredicted RBP17.95■□□□□ 0.46
EPB41L1-217ENST00000479336 SLC16A10Q8TF71 515 aa17.95■□□□□ 0.46
EPB41L1-217ENST00000479336 CCNL1Q9UK58 526 aaPredicted RBP17.95■□□□□ 0.46
EPB41L1-217ENST00000479336 PKD1L3Q7Z443 1732 aa17.95■□□□□ 0.46
EPB41L1-217ENST00000479336 IFFO2Q5TF58 517 aa17.94■□□□□ 0.46
EPB41L1-217ENST00000479336 HOXC9P31274 260 aa17.93■□□□□ 0.46
EPB41L1-217ENST00000479336 HDGFL2Q7Z4V5 671 aaPredicted RBP17.93■□□□□ 0.46
EPB41L1-217ENST00000479336 CARD11Q9BXL7 1154 aa17.92■□□□□ 0.46
EPB41L1-217ENST00000479336 RRS1Q15050 365 aaKnown RBP17.91■□□□□ 0.46
EPB41L1-217ENST00000479336 NBPF6Q5VWK0 638 aa17.9■□□□□ 0.46
EPB41L1-217ENST00000479336 ZCRB1Q8TBF4 217 aaKnown RBP17.9■□□□□ 0.46
EPB41L1-217ENST00000479336 NBPF4Q96M43 638 aa17.9■□□□□ 0.46
EPB41L1-217ENST00000479336 BRCA1P38398 1863 aaKnown RBP17.9■□□□□ 0.46
EPB41L1-217ENST00000479336 KIF13BQ9NQT8 1826 aa17.89■□□□□ 0.45
EPB41L1-217ENST00000479336 AMPHP49418 695 aa17.88■□□□□ 0.45
EPB41L1-217ENST00000479336 ADCY9O60503 1353 aa17.88■□□□□ 0.45
EPB41L1-217ENST00000479336 USP47Q96K76 1375 aa17.88■□□□□ 0.45
EPB41L1-217ENST00000479336 TERF2IPQ9NYB0 399 aa17.86■□□□□ 0.45
EPB41L1-217ENST00000479336 ANKRD26Q9UPS8 1709 aa17.85■□□□□ 0.45
EPB41L1-217ENST00000479336 PALLDQ8WX93 1383 aa17.84■□□□□ 0.45
EPB41L1-217ENST00000479336 PHF14O94880 888 aa17.84■□□□□ 0.45
EPB41L1-217ENST00000479336 COG3Q96JB2 828 aa17.84■□□□□ 0.45
EPB41L1-217ENST00000479336 GGNBP2Q9H3C7 697 aa17.84■□□□□ 0.45
EPB41L1-217ENST00000479336 C4AP0C0L4 1744 aa17.84■□□□□ 0.45
EPB41L1-217ENST00000479336 MYH14Q7Z406 1995 aaKnown RBP17.83■□□□□ 0.44
EPB41L1-217ENST00000479336 MPRIPQ6WCQ1 1025 aa17.83■□□□□ 0.44
EPB41L1-217ENST00000479336 TESK2Q96S53 571 aa17.83■□□□□ 0.44
EPB41L1-217ENST00000479336 VIRMAQ69YN4 1812 aaKnown RBP17.82■□□□□ 0.44
EPB41L1-217ENST00000479336 IGSF1Q8N6C5 1336 aa17.82■□□□□ 0.44
EPB41L1-217ENST00000479336 COL5A3P25940 1745 aaPredicted RBP17.82■□□□□ 0.44
EPB41L1-217ENST00000479336 GRIN3BO60391 1043 aa17.82■□□□□ 0.44
EPB41L1-217ENST00000479336 GPBP1L1Q9HC44 474 aaPredicted RBP17.82■□□□□ 0.44
EPB41L1-217ENST00000479336 HSP90AB2PQ58FF8 381 aa17.81■□□□□ 0.44
EPB41L1-217ENST00000479336 WDR90Q96KV7 1748 aa17.81■□□□□ 0.44
EPB41L1-217ENST00000479336 CICQ96RK0 1608 aaPredicted RBP17.8■□□□□ 0.44
EPB41L1-217ENST00000479336 ST20-MTHFSA0A0A6YYL1 179 aa17.8■□□□□ 0.44
EPB41L1-217ENST00000479336 CYP27B1O15528 508 aa17.8■□□□□ 0.44
EPB41L1-217ENST00000479336 CCDC88AQ3V6T2 1871 aa17.8■□□□□ 0.44
EPB41L1-217ENST00000479336 RTL1A6NKG5 1358 aa17.79■□□□□ 0.44
EPB41L1-217ENST00000479336 SBF1O95248 1867 aa17.79■□□□□ 0.44
EPB41L1-217ENST00000479336 ARFGEF1Q9Y6D6 1849 aa17.78■□□□□ 0.44
EPB41L1-217ENST00000479336 FYB1O15117 783 aa17.77■□□□□ 0.44
EPB41L1-217ENST00000479336 HSPA6P17066 643 aa17.77■□□□□ 0.44
EPB41L1-217ENST00000479336 LINC00116Q8NCU8 138 aa17.77■□□□□ 0.44
EPB41L1-217ENST00000479336 RAPGEF4Q8WZA2 1011 aa17.77■□□□□ 0.44
EPB41L1-217ENST00000479336 CD2APQ9Y5K6 639 aa17.77■□□□□ 0.44
EPB41L1-217ENST00000479336 TATP17735 454 aaPredicted RBP17.76■□□□□ 0.43
EPB41L1-217ENST00000479336 PCDH11XQ9BZA7 1347 aa17.75■□□□□ 0.43
EPB41L1-217ENST00000479336 PCDH11YQ9BZA8 1340 aa17.75■□□□□ 0.43
EPB41L1-217ENST00000479336 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.75■□□□□ 0.43
EPB41L1-217ENST00000479336 KIF3CO14782 793 aa17.75■□□□□ 0.43
EPB41L1-217ENST00000479336 AK7Q96M32 723 aa17.75■□□□□ 0.43
EPB41L1-217ENST00000479336 EMILIN1Q9Y6C2 1016 aa17.75■□□□□ 0.43
EPB41L1-217ENST00000479336 SMG6Q86US8 1419 aaKnown RBP17.74■□□□□ 0.43
EPB41L1-217ENST00000479336 PIGBQ92521 554 aa17.74■□□□□ 0.43
EPB41L1-217ENST00000479336 PXDNLA1KZ92 1463 aa17.74■□□□□ 0.43
EPB41L1-217ENST00000479336 EIF4G2P78344 907 aaKnown RBP eCLIP17.73■□□□□ 0.43
EPB41L1-217ENST00000479336 ITPK1Q13572 414 aa17.73■□□□□ 0.43
EPB41L1-217ENST00000479336 PCNTO95613 3336 aa17.72■□□□□ 0.43
EPB41L1-217ENST00000479336 INSRP06213 1382 aa17.72■□□□□ 0.43
EPB41L1-217ENST00000479336 ZNF316A6NFI3 1004 aaPredicted RBP17.72■□□□□ 0.43
EPB41L1-217ENST00000479336 FLT4P35916 1363 aa17.71■□□□□ 0.43
EPB41L1-217ENST00000479336 ASAP1Q9ULH1 1129 aa17.7■□□□□ 0.42
EPB41L1-217ENST00000479336 AFDNP55196 1824 aaKnown RBP17.7■□□□□ 0.42
EPB41L1-217ENST00000479336 TJP1Q07157 1748 aa17.69■□□□□ 0.42
EPB41L1-217ENST00000479336 HTRA3P83110 453 aa17.69■□□□□ 0.42
EPB41L1-217ENST00000479336 PUS7Q96PZ0 661 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms