RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 IL13P35225 146 aa27.6■■■□□ 2.01
VARS-224ENST00000479051 PPP2R1AP30153 589 aa27.59■■■□□ 2.01
VARS-224ENST00000479051 PARD3Q8TEW0 1356 aa27.58■■■□□ 2.01
VARS-224ENST00000479051 PLEKHG2Q9H7P9 1386 aa27.58■■■□□ 2.01
VARS-224ENST00000479051 SPG7Q9UQ90 795 aa27.57■■■□□ 2
VARS-224ENST00000479051 PCDH11XQ9BZA7 1347 aa27.57■■■□□ 2
VARS-224ENST00000479051 PCDH11YQ9BZA8 1340 aa27.57■■■□□ 2
VARS-224ENST00000479051 RALBP1Q15311 655 aa27.56■■■□□ 2
VARS-224ENST00000479051 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.55■■■□□ 2
VARS-224ENST00000479051 TNS1Q9HBL0 1735 aaKnown RBP27.55■■■□□ 2
VARS-224ENST00000479051 APBA3O96018 575 aa27.54■■■□□ 2
VARS-224ENST00000479051 SULT6B1Q6IMI4 303 aa27.54■■■□□ 2
VARS-224ENST00000479051 DEFB132Q7Z7B7 95 aa27.54■■■□□ 2
VARS-224ENST00000479051 BCL11BQ9C0K0 894 aaPredicted RBP27.54■■■□□ 2
VARS-224ENST00000479051 SBF2Q86WG5 1849 aa27.53■■■□□ 2
VARS-224ENST00000479051 SHANK3Q9BYB0 1731 aa27.53■■■□□ 2
VARS-224ENST00000479051 COL3A1P02461 1466 aaPredicted RBP27.52■■■□□ 2
VARS-224ENST00000479051 PKD1L3Q7Z443 1732 aa27.52■■■□□ 2
VARS-224ENST00000479051 KDRP35968 1356 aa27.5■■□□□ 1.99
VARS-224ENST00000479051 PLEKHO1Q53GL0 409 aaPredicted RBP27.5■■□□□ 1.99
VARS-224ENST00000479051 AEBP1Q8IUX7 1158 aa27.5■■□□□ 1.99
VARS-224ENST00000479051 ACSBG1Q96GR2 724 aa27.5■■□□□ 1.99
VARS-224ENST00000479051 NUDCQ9Y266 331 aa27.5■■□□□ 1.99
VARS-224ENST00000479051 U2SURPO15042 1029 aaKnown RBP27.49■■□□□ 1.99
VARS-224ENST00000479051 EN1Q05925 392 aaPredicted RBP27.48■■□□□ 1.99
VARS-224ENST00000479051 AMOTQ4VCS5 1084 aa27.48■■□□□ 1.99
VARS-224ENST00000479051 NHSQ6T4R5 1651 aa27.47■■□□□ 1.99
VARS-224ENST00000479051 CYP27B1O15528 508 aa27.46■■□□□ 1.99
VARS-224ENST00000479051 HMOX1P09601 288 aa27.46■■□□□ 1.99
VARS-224ENST00000479051 KAT6BQ8WYB5 2073 aa27.45■■□□□ 1.99
VARS-224ENST00000479051 IFNL2Q8IZJ0 200 aa27.45■■□□□ 1.98
VARS-224ENST00000479051 KCNQ2O43526 872 aa27.43■■□□□ 1.98
VARS-224ENST00000479051 SYTL4Q96C24 671 aaPredicted RBP27.43■■□□□ 1.98
VARS-224ENST00000479051 MYBBP1AQ9BQG0 1328 aaKnown RBP27.42■■□□□ 1.98
VARS-224ENST00000479051 PLSCR1O15162 318 aa27.42■■□□□ 1.98
VARS-224ENST00000479051 DOT1LQ8TEK3 1739 aa27.41■■□□□ 1.98
VARS-224ENST00000479051 HSP90AB1P08238 724 aaKnown RBP27.41■■□□□ 1.98
VARS-224ENST00000479051 PHKG2P15735 406 aa27.41■■□□□ 1.98
VARS-224ENST00000479051 NKX1-1Q15270 411 aaPredicted RBP27.41■■□□□ 1.98
VARS-224ENST00000479051 EZH2Q15910 746 aaKnown RBP27.41■■□□□ 1.98
VARS-224ENST00000479051 ZNF530Q6P9A1 599 aaPredicted RBP27.41■■□□□ 1.98
VARS-224ENST00000479051 PTF1AQ7RTS3 328 aa27.41■■□□□ 1.98
VARS-224ENST00000479051 CAMKK2Q96RR4 588 aa27.41■■□□□ 1.98
VARS-224ENST00000479051 PRIM1P49642 420 aaKnown RBP27.4■■□□□ 1.98
VARS-224ENST00000479051 C1orf141Q5JVX7 400 aa27.4■■□□□ 1.98
VARS-224ENST00000479051 RGPD3A6NKT7 1758 aaPredicted RBP27.38■■□□□ 1.97
VARS-224ENST00000479051 RGPD4Q7Z3J3 1758 aa27.38■■□□□ 1.97
VARS-224ENST00000479051 U2AF1L5P0DN76 240 aaPredicted RBP27.38■■□□□ 1.97
VARS-224ENST00000479051 U2AF1Q01081 240 aaKnown RBP eCLIP27.38■■□□□ 1.97
VARS-224ENST00000479051 PRKRIP1Q9H875 184 aaPredicted RBP27.38■■□□□ 1.97
VARS-224ENST00000479051 BTAF1O14981 1849 aa27.36■■□□□ 1.97
VARS-224ENST00000479051 DCAF5Q96JK2 942 aa27.34■■□□□ 1.97
VARS-224ENST00000479051 RREB1Q92766 1687 aa27.31■■□□□ 1.96
VARS-224ENST00000479051 FCHSD2O94868 740 aa27.31■■□□□ 1.96
VARS-224ENST00000479051 AKAP4Q5JQC9 854 aa27.31■■□□□ 1.96
VARS-224ENST00000479051 MPRIPQ6WCQ1 1025 aa27.31■■□□□ 1.96
VARS-224ENST00000479051 RSPH6AQ9H0K4 717 aa27.31■■□□□ 1.96
VARS-224ENST00000479051 PRKAR2BP31323 418 aa27.3■■□□□ 1.96
VARS-224ENST00000479051 GAS2L2Q8NHY3 880 aa27.3■■□□□ 1.96
VARS-224ENST00000479051 TMOD3Q9NYL9 352 aa27.3■■□□□ 1.96
VARS-224ENST00000479051 TOGARAM1Q9Y4F4 1720 aa27.3■■□□□ 1.96
VARS-224ENST00000479051 NEFMP07197 916 aa27.29■■□□□ 1.96
VARS-224ENST00000479051 TXNRD1Q16881 649 aa27.29■■□□□ 1.96
VARS-224ENST00000479051 NBPF14Q5TI25 921 aa27.29■■□□□ 1.96
VARS-224ENST00000479051 ERVV-2B6SEH9 535 aa27.28■■□□□ 1.96
VARS-224ENST00000479051 ANP32CO43423 234 aa27.28■■□□□ 1.96
VARS-224ENST00000479051 MTHFSDQ2M296 383 aaKnown RBP27.28■■□□□ 1.96
VARS-224ENST00000479051 PNNQ9H307 717 aaKnown RBP27.28■■□□□ 1.96
VARS-224ENST00000479051 ITGB4P16144 1822 aa27.27■■□□□ 1.96
VARS-224ENST00000479051 SMARCC1Q92922 1105 aaPredicted RBP27.26■■□□□ 1.95
VARS-224ENST00000479051 NUP188Q5SRE5 1749 aa27.26■■□□□ 1.95
VARS-224ENST00000479051 KDM6AO15550 1401 aaPredicted RBP27.24■■□□□ 1.95
VARS-224ENST00000479051 CABP4P57796 275 aa27.24■■□□□ 1.95
VARS-224ENST00000479051 SLC27A3Q5K4L6 730 aa27.24■■□□□ 1.95
VARS-224ENST00000479051 PROM2Q8N271 834 aa27.24■■□□□ 1.95
VARS-224ENST00000479051 PIGBQ92521 554 aa27.24■■□□□ 1.95
VARS-224ENST00000479051 HMGB2P26583 209 aaKnown RBP27.22■■□□□ 1.95
VARS-224ENST00000479051 WDR43Q15061 677 aaKnown RBP eCLIP27.21■■□□□ 1.959e-6■■■□□ 15.6
VARS-224ENST00000479051 PHACTR3Q96KR7 559 aa27.21■■□□□ 1.95
VARS-224ENST00000479051 MAP3K5Q99683 1374 aa27.21■■□□□ 1.95
VARS-224ENST00000479051 GNAT3A8MTJ3 354 aa27.2■■□□□ 1.94
VARS-224ENST00000479051 PALLDQ8WX93 1383 aa27.2■■□□□ 1.94
VARS-224ENST00000479051 SCN11AQ9UI33 1791 aa27.19■■□□□ 1.94
VARS-224ENST00000479051 MAPK8IP3Q9UPT6 1336 aa27.18■■□□□ 1.94
VARS-224ENST00000479051 RNMTO43148 476 aaKnown RBP27.18■■□□□ 1.94
VARS-224ENST00000479051 CCNL1Q9UK58 526 aaPredicted RBP27.18■■□□□ 1.94
VARS-224ENST00000479051 LY75O60449 1722 aa27.18■■□□□ 1.94
VARS-224ENST00000479051 STK32BQ9NY57 414 aa27.17■■□□□ 1.94
VARS-224ENST00000479051 R3HDM1Q15032 1099 aaKnown RBP27.16■■□□□ 1.94
VARS-224ENST00000479051 PSDA5PKW4 1024 aaPredicted RBP27.15■■□□□ 1.94
VARS-224ENST00000479051 NFATC2IPQ8NCF5 419 aa27.15■■□□□ 1.94
VARS-224ENST00000479051 SLC52A2Q9HAB3 445 aa27.15■■□□□ 1.94
VARS-224ENST00000479051 LGR6Q9HBX8 967 aa27.15■■□□□ 1.94
VARS-224ENST00000479051 ASAP1Q9ULH1 1129 aa27.15■■□□□ 1.94
VARS-224ENST00000479051 RTF1Q92541 710 aaKnown RBP27.14■■□□□ 1.94
VARS-224ENST00000479051 ATG3Q9NT62 314 aa27.14■■□□□ 1.94
VARS-224ENST00000479051 LRRC4BQ9NT99 713 aa27.14■■□□□ 1.94
VARS-224ENST00000479051 PLEKHF1Q96S99 279 aa27.13■■□□□ 1.93
VARS-224ENST00000479051 ADAMTS7Q9UKP4 1686 aa27.12■■□□□ 1.93
VARS-224ENST00000479051 ANO8Q9HCE9 1232 aaPredicted RBP27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms