RNA–Protein interactions for RNA: ENST00000478737.5

SCAMP3-206, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 649 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-206ENST00000478737 TATP17735 454 aaPredicted RBP13.53□□□□□ -0.24
SCAMP3-206ENST00000478737 MTHFSP49914 203 aa13.53□□□□□ -0.24
SCAMP3-206ENST00000478737 EZH2Q15910 746 aaKnown RBP13.53□□□□□ -0.24
SCAMP3-206ENST00000478737 DDX54Q8TDD1 881 aaKnown RBP13.53□□□□□ -0.24
SCAMP3-206ENST00000478737 IGSF1Q8N6C5 1336 aa13.53□□□□□ -0.24
SCAMP3-206ENST00000478737 MEGF6O75095 1541 aa13.53□□□□□ -0.24
SCAMP3-206ENST00000478737 IL13P35225 146 aa13.52□□□□□ -0.25
SCAMP3-206ENST00000478737 PLEKHG2Q9H7P9 1386 aa13.52□□□□□ -0.25
SCAMP3-206ENST00000478737 KCNQ2O43526 872 aa13.51□□□□□ -0.25
SCAMP3-206ENST00000478737 CYP27B1O15528 508 aa13.5□□□□□ -0.25
SCAMP3-206ENST00000478737 NKX1-1Q15270 411 aaPredicted RBP13.5□□□□□ -0.25
SCAMP3-206ENST00000478737 PROM2Q8N271 834 aa13.5□□□□□ -0.25
SCAMP3-206ENST00000478737 DDX10Q13206 875 aaKnown RBP13.49□□□□□ -0.25
SCAMP3-206ENST00000478737 RGPD1P0DJD0 1748 aa13.49□□□□□ -0.25
SCAMP3-206ENST00000478737 PCDH11XQ9BZA7 1347 aa13.48□□□□□ -0.25
SCAMP3-206ENST00000478737 PCDH11YQ9BZA8 1340 aa13.48□□□□□ -0.25
SCAMP3-206ENST00000478737 ACSBG1Q96GR2 724 aa13.48□□□□□ -0.25
SCAMP3-206ENST00000478737 SPG7Q9UQ90 795 aa13.48□□□□□ -0.25
SCAMP3-206ENST00000478737 KDRP35968 1356 aa13.47□□□□□ -0.25
SCAMP3-206ENST00000478737 PRIM1P49642 420 aaKnown RBP13.47□□□□□ -0.25
SCAMP3-206ENST00000478737 TNS1Q9HBL0 1735 aaKnown RBP13.47□□□□□ -0.25
SCAMP3-206ENST00000478737 CNGB1Q14028 1251 aaPredicted RBP13.46□□□□□ -0.25
SCAMP3-206ENST00000478737 DIAPH1O60610 1272 aaKnown RBP13.45□□□□□ -0.26
SCAMP3-206ENST00000478737 AMOTQ4VCS5 1084 aa13.45□□□□□ -0.26
SCAMP3-206ENST00000478737 SULT6B1Q6IMI4 303 aa13.45□□□□□ -0.26
SCAMP3-206ENST00000478737 AEBP1Q8IUX7 1158 aa13.45□□□□□ -0.26
SCAMP3-206ENST00000478737 PHKG2P15735 406 aa13.44□□□□□ -0.26
SCAMP3-206ENST00000478737 PPP2R1AP30153 589 aa13.44□□□□□ -0.26
SCAMP3-206ENST00000478737 TXNRD1Q16881 649 aa13.44□□□□□ -0.26
SCAMP3-206ENST00000478737 PLEKHO1Q53GL0 409 aaPredicted RBP13.44□□□□□ -0.26
SCAMP3-206ENST00000478737 IFNL2Q8IZJ0 200 aa13.44□□□□□ -0.26
SCAMP3-206ENST00000478737 SBF2Q86WG5 1849 aa13.43□□□□□ -0.26
SCAMP3-206ENST00000478737 NBPF14Q5TI25 921 aa13.43□□□□□ -0.26
SCAMP3-206ENST00000478737 CENPBP07199 599 aaPredicted RBP13.41□□□□□ -0.26
SCAMP3-206ENST00000478737 R3HDM1Q15032 1099 aaKnown RBP13.41□□□□□ -0.26
SCAMP3-206ENST00000478737 SLC27A3Q5K4L6 730 aa13.41□□□□□ -0.26
SCAMP3-206ENST00000478737 SYTL4Q96C24 671 aaPredicted RBP13.41□□□□□ -0.26
SCAMP3-206ENST00000478737 COL3A1P02461 1466 aaPredicted RBP13.41□□□□□ -0.26
SCAMP3-206ENST00000478737 SRCAPQ6ZRS2 3230 aa13.4□□□□□ -0.26
SCAMP3-206ENST00000478737 HSP90AB1P08238 724 aaKnown RBP13.4□□□□□ -0.26
SCAMP3-206ENST00000478737 DCAF5Q96JK2 942 aa13.4□□□□□ -0.26
SCAMP3-206ENST00000478737 CFAP53Q96M91 514 aa13.4□□□□□ -0.26
SCAMP3-206ENST00000478737 LRRC4BQ9NT99 713 aa13.4□□□□□ -0.26
SCAMP3-206ENST00000478737 NHSQ6T4R5 1651 aa13.4□□□□□ -0.26
SCAMP3-206ENST00000478737 SHANK3Q9BYB0 1731 aa13.39□□□□□ -0.27
SCAMP3-206ENST00000478737 PSDA5PKW4 1024 aaPredicted RBP13.39□□□□□ -0.27
SCAMP3-206ENST00000478737 ERVV-2B6SEH9 535 aa13.39□□□□□ -0.27
SCAMP3-206ENST00000478737 RALBP1Q15311 655 aa13.39□□□□□ -0.27
SCAMP3-206ENST00000478737 PIGBQ92521 554 aa13.39□□□□□ -0.27
SCAMP3-206ENST00000478737 RGPD3A6NKT7 1758 aaPredicted RBP13.39□□□□□ -0.27
SCAMP3-206ENST00000478737 RGPD4Q7Z3J3 1758 aa13.39□□□□□ -0.27
SCAMP3-206ENST00000478737 VIRMAQ69YN4 1812 aaKnown RBP13.39□□□□□ -0.27
SCAMP3-206ENST00000478737 HMOX1P09601 288 aa13.38□□□□□ -0.27
SCAMP3-206ENST00000478737 ZNF530Q6P9A1 599 aaPredicted RBP13.38□□□□□ -0.27
SCAMP3-206ENST00000478737 MPRIPQ6WCQ1 1025 aa13.38□□□□□ -0.27
SCAMP3-206ENST00000478737 ANO8Q9HCE9 1232 aaPredicted RBP13.38□□□□□ -0.27
SCAMP3-206ENST00000478737 PKD1L3Q7Z443 1732 aa13.38□□□□□ -0.27
SCAMP3-206ENST00000478737 SLC15A2Q16348 729 aa13.37□□□□□ -0.27
SCAMP3-206ENST00000478737 SMARCC1Q92922 1105 aaPredicted RBP13.37□□□□□ -0.27
SCAMP3-206ENST00000478737 NUDCQ9Y266 331 aa13.37□□□□□ -0.27
SCAMP3-206ENST00000478737 U2SURPO15042 1029 aaKnown RBP13.36□□□□□ -0.27
SCAMP3-206ENST00000478737 HMGB2P26583 209 aaKnown RBP13.36□□□□□ -0.27
SCAMP3-206ENST00000478737 RREB1Q92766 1687 aa13.36□□□□□ -0.27
SCAMP3-206ENST00000478737 FCHSD2O94868 740 aa13.35□□□□□ -0.27
SCAMP3-206ENST00000478737 MTHFSDQ2M296 383 aaKnown RBP13.35□□□□□ -0.27
SCAMP3-206ENST00000478737 AKAP4Q5JQC9 854 aa13.35□□□□□ -0.27
SCAMP3-206ENST00000478737 C1orf141Q5JVX7 400 aa13.35□□□□□ -0.27
SCAMP3-206ENST00000478737 AKT1S1Q96B36 256 aa13.35□□□□□ -0.27
SCAMP3-206ENST00000478737 STK32BQ9NY57 414 aa13.35□□□□□ -0.27
SCAMP3-206ENST00000478737 TMOD3Q9NYL9 352 aa13.35□□□□□ -0.27
SCAMP3-206ENST00000478737 RSPH6AQ9H0K4 717 aa13.34□□□□□ -0.27
SCAMP3-206ENST00000478737 CCNL1Q9UK58 526 aaPredicted RBP13.34□□□□□ -0.27
SCAMP3-206ENST00000478737 NUP188Q5SRE5 1749 aa13.33□□□□□ -0.27
SCAMP3-206ENST00000478737 KAT6BQ8WYB5 2073 aa13.33□□□□□ -0.27
SCAMP3-206ENST00000478737 KDM6AO15550 1401 aaPredicted RBP13.33□□□□□ -0.28
SCAMP3-206ENST00000478737 ATG3Q9NT62 314 aa13.33□□□□□ -0.28
SCAMP3-206ENST00000478737 ASAP1Q9ULH1 1129 aa13.33□□□□□ -0.28
SCAMP3-206ENST00000478737 BTAF1O14981 1849 aa13.33□□□□□ -0.28
SCAMP3-206ENST00000478737 PALLDQ8WX93 1383 aa13.32□□□□□ -0.28
SCAMP3-206ENST00000478737 U2AF1L5P0DN76 240 aaPredicted RBP13.32□□□□□ -0.28
SCAMP3-206ENST00000478737 KCNQ4P56696 695 aa13.32□□□□□ -0.28
SCAMP3-206ENST00000478737 U2AF1Q01081 240 aaKnown RBP eCLIP13.32□□□□□ -0.28
SCAMP3-206ENST00000478737 PHACTR3Q96KR7 559 aa13.32□□□□□ -0.28
SCAMP3-206ENST00000478737 MYBBP1AQ9BQG0 1328 aaKnown RBP13.32□□□□□ -0.28
SCAMP3-206ENST00000478737 LOC102724428A0A0B4J2F2 783 aa13.31□□□□□ -0.28
SCAMP3-206ENST00000478737 SIK1P57059 783 aa13.31□□□□□ -0.28
SCAMP3-206ENST00000478737 CABP4P57796 275 aa13.31□□□□□ -0.28
SCAMP3-206ENST00000478737 ZNF827Q17R98 1081 aa13.31□□□□□ -0.28
SCAMP3-206ENST00000478737 NFATC2IPQ8NCF5 419 aa13.31□□□□□ -0.28
SCAMP3-206ENST00000478737 GAS2L2Q8NHY3 880 aa13.31□□□□□ -0.28
SCAMP3-206ENST00000478737 PDGFDQ9GZP0 370 aaPredicted RBP13.31□□□□□ -0.28
SCAMP3-206ENST00000478737 LGR6Q9HBX8 967 aa13.31□□□□□ -0.28
SCAMP3-206ENST00000478737 DOT1LQ8TEK3 1739 aa13.3□□□□□ -0.28
SCAMP3-206ENST00000478737 RNMTO43148 476 aaKnown RBP13.3□□□□□ -0.28
SCAMP3-206ENST00000478737 PRKAR2BP31323 418 aa13.3□□□□□ -0.28
SCAMP3-206ENST00000478737 PRKRIP1Q9H875 184 aaPredicted RBP13.3□□□□□ -0.28
SCAMP3-206ENST00000478737 ANP32CO43423 234 aa13.29□□□□□ -0.28
SCAMP3-206ENST00000478737 IL17REQ8NFR9 667 aa13.29□□□□□ -0.28
SCAMP3-206ENST00000478737 SLC52A2Q9HAB3 445 aa13.29□□□□□ -0.28
SCAMP3-206ENST00000478737 DLG5Q8TDM6 1919 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms