RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 PKD1L3Q7Z443 1732 aa25.88■■□□□ 1.73
SREBF1-212ENST00000478616 PER1O15534 1290 aaPredicted RBP25.88■■□□□ 1.73
SREBF1-212ENST00000478616 AMER1Q5JTC6 1135 aaPredicted RBP25.88■■□□□ 1.73
SREBF1-212ENST00000478616 PLSCR1O15162 318 aa25.87■■□□□ 1.73
SREBF1-212ENST00000478616 NSD2O96028 1365 aa25.86■■□□□ 1.73
SREBF1-212ENST00000478616 ACSBG1Q96GR2 724 aa25.86■■□□□ 1.73
SREBF1-212ENST00000478616 LRP5O75197 1615 aa25.85■■□□□ 1.73
SREBF1-212ENST00000478616 TNNT2P45379 298 aaPredicted RBP25.85■■□□□ 1.73
SREBF1-212ENST00000478616 R3HDM1Q15032 1099 aaKnown RBP25.84■■□□□ 1.73
SREBF1-212ENST00000478616 TOGARAM1Q9Y4F4 1720 aa25.84■■□□□ 1.73
SREBF1-212ENST00000478616 PPM1GO15355 546 aaPredicted RBP25.82■■□□□ 1.72
SREBF1-212ENST00000478616 DDX54Q8TDD1 881 aaKnown RBP25.82■■□□□ 1.72
SREBF1-212ENST00000478616 PAPPAQ13219 1627 aa25.81■■□□□ 1.72
SREBF1-212ENST00000478616 ZCRB1Q8TBF4 217 aaKnown RBP25.81■■□□□ 1.72
SREBF1-212ENST00000478616 EYA1Q99502 592 aa25.81■■□□□ 1.72
SREBF1-212ENST00000478616 ANO8Q9HCE9 1232 aaPredicted RBP25.81■■□□□ 1.72
SREBF1-212ENST00000478616 EIF4A2Q14240 407 aaKnown RBP25.8■■□□□ 1.72
SREBF1-212ENST00000478616 CASZ1Q86V15 1759 aa25.79■■□□□ 1.72
SREBF1-212ENST00000478616 LY75O60449 1722 aa25.77■■□□□ 1.72
SREBF1-212ENST00000478616 KNSTRNQ9Y448 316 aa25.77■■□□□ 1.72
SREBF1-212ENST00000478616 ITGB4P16144 1822 aa25.77■■□□□ 1.72
SREBF1-212ENST00000478616 CYP27B1O15528 508 aa25.75■■□□□ 1.71
SREBF1-212ENST00000478616 TXNRD1Q16881 649 aa25.75■■□□□ 1.71
SREBF1-212ENST00000478616 MORC1Q86VD1 984 aa25.75■■□□□ 1.71
SREBF1-212ENST00000478616 TATP17735 454 aaPredicted RBP25.73■■□□□ 1.71
SREBF1-212ENST00000478616 RAPGEF4Q8WZA2 1011 aa25.73■■□□□ 1.71
SREBF1-212ENST00000478616 IGSF1Q8N6C5 1336 aa25.72■■□□□ 1.71
SREBF1-212ENST00000478616 PRIM1P49642 420 aaKnown RBP25.71■■□□□ 1.71
SREBF1-212ENST00000478616 PDGFDQ9GZP0 370 aaPredicted RBP25.7■■□□□ 1.7
SREBF1-212ENST00000478616 LRRC4BQ9NT99 713 aa25.7■■□□□ 1.7
SREBF1-212ENST00000478616 TUBGCP6Q96RT7 1819 aa25.69■■□□□ 1.7
SREBF1-212ENST00000478616 NPC1L1Q9UHC9 1359 aa25.69■■□□□ 1.7
SREBF1-212ENST00000478616 PCDH11XQ9BZA7 1347 aa25.67■■□□□ 1.7
SREBF1-212ENST00000478616 PCDH11YQ9BZA8 1340 aa25.67■■□□□ 1.7
SREBF1-212ENST00000478616 CC2D1BQ5T0F9 858 aaKnown RBP25.66■■□□□ 1.7
SREBF1-212ENST00000478616 IL13P35225 146 aa25.65■■□□□ 1.7
SREBF1-212ENST00000478616 NBPF14Q5TI25 921 aa25.65■■□□□ 1.7
SREBF1-212ENST00000478616 AEBP1Q8IUX7 1158 aa25.65■■□□□ 1.7
SREBF1-212ENST00000478616 COL3A1P02461 1466 aaPredicted RBP25.65■■□□□ 1.7
SREBF1-212ENST00000478616 NKX1-1Q15270 411 aaPredicted RBP25.64■■□□□ 1.7
SREBF1-212ENST00000478616 QSER1Q2KHR3 1735 aa25.63■■□□□ 1.69
SREBF1-212ENST00000478616 KDRP35968 1356 aa25.62■■□□□ 1.69
SREBF1-212ENST00000478616 MTHFSP49914 203 aa25.62■■□□□ 1.69
SREBF1-212ENST00000478616 KCNQ4P56696 695 aa25.62■■□□□ 1.69
SREBF1-212ENST00000478616 ZNF827Q17R98 1081 aa25.62■■□□□ 1.69
SREBF1-212ENST00000478616 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.62■■□□□ 1.69
SREBF1-212ENST00000478616 TAF1LQ8IZX4 1826 aa25.62■■□□□ 1.69
SREBF1-212ENST00000478616 SYTL4Q96C24 671 aaPredicted RBP25.61■■□□□ 1.69
SREBF1-212ENST00000478616 PLEKHG2Q9H7P9 1386 aa25.6■■□□□ 1.69
SREBF1-212ENST00000478616 SLC15A2Q16348 729 aa25.6■■□□□ 1.69
SREBF1-212ENST00000478616 PHKG2P15735 406 aa25.58■■□□□ 1.69
SREBF1-212ENST00000478616 AKT1S1Q96B36 256 aa25.57■■□□□ 1.68
SREBF1-212ENST00000478616 SPG7Q9UQ90 795 aa25.57■■□□□ 1.68
SREBF1-212ENST00000478616 C5P01031 1676 aa25.57■■□□□ 1.68
SREBF1-212ENST00000478616 VIRMAQ69YN4 1812 aaKnown RBP25.56■■□□□ 1.68
SREBF1-212ENST00000478616 KDM6AO15550 1401 aaPredicted RBP25.55■■□□□ 1.68
SREBF1-212ENST00000478616 COL24A1Q17RW2 1714 aa25.54■■□□□ 1.68
SREBF1-212ENST00000478616 PIGBQ92521 554 aa25.54■■□□□ 1.68
SREBF1-212ENST00000478616 STK32BQ9NY57 414 aa25.54■■□□□ 1.68
SREBF1-212ENST00000478616 CNGB1Q14028 1251 aaPredicted RBP25.53■■□□□ 1.68
SREBF1-212ENST00000478616 SLC27A3Q5K4L6 730 aa25.53■■□□□ 1.68
SREBF1-212ENST00000478616 SULT6B1Q6IMI4 303 aa25.53■■□□□ 1.68
SREBF1-212ENST00000478616 MPRIPQ6WCQ1 1025 aa25.53■■□□□ 1.68
SREBF1-212ENST00000478616 IFNL2Q8IZJ0 200 aa25.52■■□□□ 1.68
SREBF1-212ENST00000478616 SCN11AQ9UI33 1791 aa25.51■■□□□ 1.67
SREBF1-212ENST00000478616 PTGER2P43116 358 aa25.5■■□□□ 1.67
SREBF1-212ENST00000478616 PALLDQ8WX93 1383 aa25.5■■□□□ 1.67
SREBF1-212ENST00000478616 ZBTB7AO95365 584 aa25.48■■□□□ 1.67
SREBF1-212ENST00000478616 SGIP1Q9BQI5 828 aa25.48■■□□□ 1.67
SREBF1-212ENST00000478616 ADAMTS7Q9UKP4 1686 aa25.48■■□□□ 1.67
SREBF1-212ENST00000478616 PNPLA7Q6ZV29 1317 aa25.47■■□□□ 1.67
SREBF1-212ENST00000478616 CCNL1Q9UK58 526 aaPredicted RBP25.47■■□□□ 1.67
SREBF1-212ENST00000478616 C4BP0C0L5 1744 aa25.46■■□□□ 1.67
SREBF1-212ENST00000478616 SPON1Q9HCB6 807 aa25.46■■□□□ 1.67
SREBF1-212ENST00000478616 UBR3Q6ZT12 1888 aa25.46■■□□□ 1.67
SREBF1-212ENST00000478616 HMOX1P09601 288 aa25.45■■□□□ 1.66
SREBF1-212ENST00000478616 PLEKHO1Q53GL0 409 aaPredicted RBP25.45■■□□□ 1.66
SREBF1-212ENST00000478616 ZNF530Q6P9A1 599 aaPredicted RBP25.45■■□□□ 1.66
SREBF1-212ENST00000478616 ASAP1Q9ULH1 1129 aa25.45■■□□□ 1.66
SREBF1-212ENST00000478616 DIAPH1O60610 1272 aaKnown RBP25.44■■□□□ 1.66
SREBF1-212ENST00000478616 AMOTQ4VCS5 1084 aa25.43■■□□□ 1.66
SREBF1-212ENST00000478616 AMIGO3Q86WK7 504 aa25.43■■□□□ 1.66
SREBF1-212ENST00000478616 ATG3Q9NT62 314 aa25.43■■□□□ 1.66
SREBF1-212ENST00000478616 ATF5Q9Y2D1 282 aaPredicted RBP25.43■■□□□ 1.66
SREBF1-212ENST00000478616 ZNF831Q5JPB2 1677 aa25.42■■□□□ 1.66
SREBF1-212ENST00000478616 PPP2R1AP30153 589 aa25.42■■□□□ 1.66
SREBF1-212ENST00000478616 SLC4A9Q96Q91 983 aa25.41■■□□□ 1.66
SREBF1-212ENST00000478616 COL5A3P25940 1745 aaPredicted RBP25.4■■□□□ 1.66
SREBF1-212ENST00000478616 DCAF5Q96JK2 942 aa25.4■■□□□ 1.66
SREBF1-212ENST00000478616 TMOD3Q9NYL9 352 aa25.4■■□□□ 1.66
SREBF1-212ENST00000478616 ERVV-2B6SEH9 535 aa25.39■■□□□ 1.66
SREBF1-212ENST00000478616 ITPK1Q13572 414 aa25.39■■□□□ 1.66
SREBF1-212ENST00000478616 SMARCC1Q92922 1105 aaPredicted RBP25.38■■□□□ 1.65
SREBF1-212ENST00000478616 MTFR1LQ9H019 292 aa25.38■■□□□ 1.65
SREBF1-212ENST00000478616 MRC1P22897 1456 aa25.38■■□□□ 1.65
SREBF1-212ENST00000478616 MYH14Q7Z406 1995 aaKnown RBP25.37■■□□□ 1.65
SREBF1-212ENST00000478616 MTHFSDQ2M296 383 aaKnown RBP25.37■■□□□ 1.65
SREBF1-212ENST00000478616 LINC00116Q8NCU8 138 aa25.37■■□□□ 1.65
SREBF1-212ENST00000478616 LOC102724428A0A0B4J2F2 783 aa25.36■■□□□ 1.65
SREBF1-212ENST00000478616 SIK1P57059 783 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms