RNA–Protein interactions for RNA: ENST00000478503.6

SH3D19-207, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 4,038 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-207ENST00000478503 DDX19BQ9UMR2 479 aa7.56□□□□□ -1.2
SH3D19-207ENST00000478503 ALKQ9UM73 1620 aa7.56□□□□□ -1.2
SH3D19-207ENST00000478503 TWISTNBQ3B726 338 aaPredicted RBP7.56□□□□□ -1.2
SH3D19-207ENST00000478503 RBM26Q5T8P6 1007 aaKnown RBP7.56□□□□□ -1.2
SH3D19-207ENST00000478503 ARHGEF28Q8N1W1 1705 aaKnown RBP7.56□□□□□ -1.2
SH3D19-207ENST00000478503 ACEP12821 1306 aa7.56□□□□□ -1.2
SH3D19-207ENST00000478503 A2ML1A8K2U0 1454 aa7.56□□□□□ -1.2
SH3D19-207ENST00000478503 VAMP4O75379 141 aa7.55□□□□□ -1.2
SH3D19-207ENST00000478503 NGDNQ8NEJ9 315 aaKnown RBP7.55□□□□□ -1.2
SH3D19-207ENST00000478503 CFAP74Q9C0B2 1584 aa7.55□□□□□ -1.2
SH3D19-207ENST00000478503 RGL2O15211 777 aa7.55□□□□□ -1.2
SH3D19-207ENST00000478503 MYO3AQ8NEV4 1616 aa7.55□□□□□ -1.2
SH3D19-207ENST00000478503 IPO8O15397 1037 aaKnown RBP7.55□□□□□ -1.2
SH3D19-207ENST00000478503 SLC4A10Q6U841 1118 aa7.55□□□□□ -1.2
SH3D19-207ENST00000478503 ZBTB40Q9NUA8 1239 aa7.55□□□□□ -1.2
SH3D19-207ENST00000478503 RBM27Q9P2N5 1060 aaKnown RBP7.55□□□□□ -1.2
SH3D19-207ENST00000478503 ARHGEF40Q8TER5 1519 aa7.55□□□□□ -1.2
SH3D19-207ENST00000478503 ZC3H13Q5T200 1668 aaKnown RBP7.55□□□□□ -1.2
SH3D19-207ENST00000478503 ROBO2Q9HCK4 1378 aa7.55□□□□□ -1.2
SH3D19-207ENST00000478503 EIF4A2Q14240 407 aaKnown RBP7.55□□□□□ -1.2
SH3D19-207ENST00000478503 TMEM131LA2VDJ0 1609 aa7.54□□□□□ -1.2
SH3D19-207ENST00000478503 MKRN3Q13064 507 aaKnown RBP7.54□□□□□ -1.2
SH3D19-207ENST00000478503 NEURL4Q96JN8 1562 aa7.54□□□□□ -1.2
SH3D19-207ENST00000478503 RICTORQ6R327 1708 aa7.54□□□□□ -1.2
SH3D19-207ENST00000478503 TBC1D2Q9BYX2 928 aa7.54□□□□□ -1.2
SH3D19-207ENST00000478503 PNNQ9H307 717 aaKnown RBP7.54□□□□□ -1.2
SH3D19-207ENST00000478503 AMOTL2Q9Y2J4 779 aa7.54□□□□□ -1.2
SH3D19-207ENST00000478503 NLRP1Q9C000 1473 aa7.54□□□□□ -1.2
SH3D19-207ENST00000478503 GORABQ5T7V8 394 aa7.54□□□□□ -1.2
SH3D19-207ENST00000478503 USHBP1Q8N6Y0 703 aa7.54□□□□□ -1.2
SH3D19-207ENST00000478503 ZFYVE9O95405 1425 aa7.53□□□□□ -1.2
SH3D19-207ENST00000478503 MAPK8IP2Q13387 824 aaPredicted RBP7.53□□□□□ -1.2
SH3D19-207ENST00000478503 C16orf71Q8IYS4 520 aaPredicted RBP7.53□□□□□ -1.2
SH3D19-207ENST00000478503 PREX1Q8TCU6 1659 aa7.53□□□□□ -1.2
SH3D19-207ENST00000478503 F6X3S4 739 aa7.53□□□□□ -1.2
SH3D19-207ENST00000478503 GNAI1P63096 354 aa7.53□□□□□ -1.2
SH3D19-207ENST00000478503 MRPL50Q8N5N7 158 aaKnown RBP7.53□□□□□ -1.2
SH3D19-207ENST00000478503 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.53□□□□□ -1.2
SH3D19-207ENST00000478503 C22orf23Q9BZE7 217 aa7.53□□□□□ -1.2
SH3D19-207ENST00000478503 KIF16BQ96L93 1317 aa7.53□□□□□ -1.2
SH3D19-207ENST00000478503 XPCQ01831 940 aaPredicted RBP7.53□□□□□ -1.2
SH3D19-207ENST00000478503 TMTC2Q8N394 836 aa7.53□□□□□ -1.2
SH3D19-207ENST00000478503 LOC102724159A0A0B4J2E5 919 aa7.52□□□□□ -1.21
SH3D19-207ENST00000478503 AMPHP49418 695 aa7.52□□□□□ -1.21
SH3D19-207ENST00000478503 BECN1Q14457 450 aa7.52□□□□□ -1.21
SH3D19-207ENST00000478503 PWP2Q15269 919 aaKnown RBP7.52□□□□□ -1.21
SH3D19-207ENST00000478503 TTC21BQ7Z4L5 1316 aa7.52□□□□□ -1.21
SH3D19-207ENST00000478503 COL3A1P02461 1466 aaPredicted RBP7.52□□□□□ -1.21
SH3D19-207ENST00000478503 MARCH6O60337 910 aa7.52□□□□□ -1.21
SH3D19-207ENST00000478503 NLRP6P59044 892 aa7.52□□□□□ -1.21
SH3D19-207ENST00000478503 GSE1Q14687 1217 aa7.52□□□□□ -1.21
SH3D19-207ENST00000478503 SIRT2Q8IXJ6 389 aa7.52□□□□□ -1.21
SH3D19-207ENST00000478503 TNRQ92752 1358 aa7.52□□□□□ -1.21
SH3D19-207ENST00000478503 NINLQ9Y2I6 1382 aa7.52□□□□□ -1.21
SH3D19-207ENST00000478503 CPS1P31327 1500 aa7.52□□□□□ -1.21
SH3D19-207ENST00000478503 ZBTB7BO15156 539 aaPredicted RBP7.52□□□□□ -1.21
SH3D19-207ENST00000478503 HDGFP51858 240 aaKnown RBP7.52□□□□□ -1.21
SH3D19-207ENST00000478503 CHD1LQ86WJ1 897 aa7.52□□□□□ -1.21
SH3D19-207ENST00000478503 EXOC8Q8IYI6 725 aa7.52□□□□□ -1.21
SH3D19-207ENST00000478503 OTUD7AQ8TE49 926 aaPredicted RBP7.52□□□□□ -1.21
SH3D19-207ENST00000478503 TBC1D32Q96NH3 1257 aa7.52□□□□□ -1.21
SH3D19-207ENST00000478503 RBM42Q9BTD8 480 aaKnown RBP7.52□□□□□ -1.21
SH3D19-207ENST00000478503 CLTCQ00610 1675 aaKnown RBP7.52□□□□□ -1.21
SH3D19-207ENST00000478503 PNPLA6Q8IY17 1366 aa7.51□□□□□ -1.21
SH3D19-207ENST00000478503 CLGNO14967 610 aa7.51□□□□□ -1.21
SH3D19-207ENST00000478503 EID1Q9Y6B2 187 aa7.51□□□□□ -1.21
SH3D19-207ENST00000478503 STK24Q9Y6E0 443 aa7.51□□□□□ -1.21
SH3D19-207ENST00000478503 LRRC7Q96NW7 1537 aa7.51□□□□□ -1.21
SH3D19-207ENST00000478503 SLC4A2P04920 1241 aa7.51□□□□□ -1.21
SH3D19-207ENST00000478503 TSHZ3Q63HK5 1081 aa7.51□□□□□ -1.21
SH3D19-207ENST00000478503 G2E3Q7L622 706 aa7.5□□□□□ -1.21
SH3D19-207ENST00000478503 RETREG2Q8NC44 543 aa7.5□□□□□ -1.21
SH3D19-207ENST00000478503 ANKRD62A6NC57 917 aa7.5□□□□□ -1.21
SH3D19-207ENST00000478503 HDAC1Q13547 482 aaPredicted RBP7.5□□□□□ -1.21
SH3D19-207ENST00000478503 SMC5Q8IY18 1101 aa7.5□□□□□ -1.21
SH3D19-207ENST00000478503 IL16Q14005 1332 aa7.5□□□□□ -1.21
SH3D19-207ENST00000478503 MAP3K19Q56UN5 1328 aa7.5□□□□□ -1.21
SH3D19-207ENST00000478503 CT47B1P0C2W7 299 aaPredicted RBP7.5□□□□□ -1.21
SH3D19-207ENST00000478503 MTHFSDQ2M296 383 aaKnown RBP7.5□□□□□ -1.21
SH3D19-207ENST00000478503 IFT57Q9NWB7 429 aa7.5□□□□□ -1.21
SH3D19-207ENST00000478503 TMEM2Q9UHN6 1383 aa7.49□□□□□ -1.21
SH3D19-207ENST00000478503 KCNA6P17658 529 aa7.49□□□□□ -1.21
SH3D19-207ENST00000478503 NUCB1Q02818 461 aa7.49□□□□□ -1.21
SH3D19-207ENST00000478503 ALDH1L2Q3SY69 923 aa7.49□□□□□ -1.21
SH3D19-207ENST00000478503 MEIS3Q99687 375 aa7.49□□□□□ -1.21
SH3D19-207ENST00000478503 TSPYL4Q9UJ04 414 aa7.49□□□□□ -1.21
SH3D19-207ENST00000478503 FAM135BQ49AJ0 1406 aa7.49□□□□□ -1.21
SH3D19-207ENST00000478503 GRIPAP1Q4V328 841 aa7.49□□□□□ -1.21
SH3D19-207ENST00000478503 RTF1Q92541 710 aaKnown RBP7.49□□□□□ -1.21
SH3D19-207ENST00000478503 EDC4Q6P2E9 1401 aaKnown RBP7.49□□□□□ -1.21
SH3D19-207ENST00000478503 DIP2BQ9P265 1576 aa7.49□□□□□ -1.21
SH3D19-207ENST00000478503 HSP90AA1P07900 732 aaKnown RBP7.49□□□□□ -1.21
SH3D19-207ENST00000478503 ABTB2Q8N961 1025 aa7.49□□□□□ -1.21
SH3D19-207ENST00000478503 RNF216Q9NWF9 866 aaPredicted RBP7.49□□□□□ -1.21
SH3D19-207ENST00000478503 ARMCX6Q7L4S7 300 aa7.48□□□□□ -1.21
SH3D19-207ENST00000478503 ZNF853P0CG23 659 aa7.48□□□□□ -1.21
SH3D19-207ENST00000478503 CALD1Q05682 793 aaKnown RBP7.48□□□□□ -1.21
SH3D19-207ENST00000478503 APBB1IPQ7Z5R6 666 aaPredicted RBP7.48□□□□□ -1.21
SH3D19-207ENST00000478503 EYA1Q99502 592 aa7.48□□□□□ -1.21
SH3D19-207ENST00000478503 CPSF1Q10570 1443 aaKnown RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms