RNA–Protein interactions for RNA: ENST00000478365.1

DDX39B-218, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-218ENST00000478365 ZCRB1Q8TBF4 217 aaKnown RBP10.74□□□□□ -0.69
DDX39B-218ENST00000478365 BCL11BQ9C0K0 894 aaPredicted RBP10.74□□□□□ -0.69
DDX39B-218ENST00000478365 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.74□□□□□ -0.69
DDX39B-218ENST00000478365 PCDH11XQ9BZA7 1347 aa10.74□□□□□ -0.69
DDX39B-218ENST00000478365 PCDH11YQ9BZA8 1340 aa10.74□□□□□ -0.69
DDX39B-218ENST00000478365 MARCH10Q8NA82 808 aaPredicted RBP10.73□□□□□ -0.69
DDX39B-218ENST00000478365 NHSQ6T4R5 1651 aa10.73□□□□□ -0.69
DDX39B-218ENST00000478365 APBA3O96018 575 aa10.72□□□□□ -0.69
DDX39B-218ENST00000478365 EIF4A2Q14240 407 aaKnown RBP10.72□□□□□ -0.69
DDX39B-218ENST00000478365 SPG7Q9UQ90 795 aa10.72□□□□□ -0.69
DDX39B-218ENST00000478365 IGSF1Q8N6C5 1336 aa10.72□□□□□ -0.69
DDX39B-218ENST00000478365 MEGF6O75095 1541 aa10.72□□□□□ -0.69
DDX39B-218ENST00000478365 PKD1L3Q7Z443 1732 aa10.72□□□□□ -0.69
DDX39B-218ENST00000478365 PLSCR1O15162 318 aa10.71□□□□□ -0.69
DDX39B-218ENST00000478365 CC2D1BQ5T0F9 858 aaKnown RBP10.71□□□□□ -0.69
DDX39B-218ENST00000478365 FAM182BQ5T319 152 aa10.71□□□□□ -0.69
DDX39B-218ENST00000478365 CFAP53Q96M91 514 aa10.71□□□□□ -0.69
DDX39B-218ENST00000478365 EYA1Q99502 592 aa10.71□□□□□ -0.69
DDX39B-218ENST00000478365 PRKCSHP14314 528 aaPredicted RBP10.7□□□□□ -0.7
DDX39B-218ENST00000478365 HSP90AB1P08238 724 aaKnown RBP10.69□□□□□ -0.7
DDX39B-218ENST00000478365 MTHFSP49914 203 aa10.69□□□□□ -0.7
DDX39B-218ENST00000478365 AMOTQ4VCS5 1084 aa10.69□□□□□ -0.7
DDX39B-218ENST00000478365 DEFB132Q7Z7B7 95 aa10.69□□□□□ -0.7
DDX39B-218ENST00000478365 USHBP1Q8N6Y0 703 aa10.69□□□□□ -0.7
DDX39B-218ENST00000478365 DDX54Q8TDD1 881 aaKnown RBP10.69□□□□□ -0.7
DDX39B-218ENST00000478365 CAMKK2Q96RR4 588 aa10.69□□□□□ -0.7
DDX39B-218ENST00000478365 SHANK3Q9BYB0 1731 aa10.69□□□□□ -0.7
DDX39B-218ENST00000478365 RREB1Q92766 1687 aa10.69□□□□□ -0.7
DDX39B-218ENST00000478365 KDRP35968 1356 aa10.68□□□□□ -0.7
DDX39B-218ENST00000478365 HOXD11P31277 338 aaPredicted RBP10.68□□□□□ -0.7
DDX39B-218ENST00000478365 EN1Q05925 392 aaPredicted RBP10.68□□□□□ -0.7
DDX39B-218ENST00000478365 PLEKHO1Q53GL0 409 aaPredicted RBP10.68□□□□□ -0.7
DDX39B-218ENST00000478365 NBPF14Q5TI25 921 aa10.68□□□□□ -0.7
DDX39B-218ENST00000478365 DCAF8L1A6NGE4 600 aa10.67□□□□□ -0.7
DDX39B-218ENST00000478365 DIAPH1O60610 1272 aaKnown RBP10.67□□□□□ -0.7
DDX39B-218ENST00000478365 IL13P35225 146 aa10.67□□□□□ -0.7
DDX39B-218ENST00000478365 NUDCQ9Y266 331 aa10.67□□□□□ -0.7
DDX39B-218ENST00000478365 BTAF1O14981 1849 aa10.66□□□□□ -0.7
DDX39B-218ENST00000478365 NKX1-1Q15270 411 aaPredicted RBP10.66□□□□□ -0.7
DDX39B-218ENST00000478365 RALBP1Q15311 655 aa10.66□□□□□ -0.7
DDX39B-218ENST00000478365 IFNL2Q8IZJ0 200 aa10.66□□□□□ -0.7
DDX39B-218ENST00000478365 DOT1LQ8TEK3 1739 aa10.66□□□□□ -0.7
DDX39B-218ENST00000478365 EZH2Q15910 746 aaKnown RBP10.65□□□□□ -0.7
DDX39B-218ENST00000478365 SLC27A3Q5K4L6 730 aa10.65□□□□□ -0.7
DDX39B-218ENST00000478365 NUP188Q5SRE5 1749 aa10.64□□□□□ -0.71
DDX39B-218ENST00000478365 COL3A1P02461 1466 aaPredicted RBP10.64□□□□□ -0.71
DDX39B-218ENST00000478365 CYP27B1O15528 508 aa10.64□□□□□ -0.71
DDX39B-218ENST00000478365 C1orf141Q5JVX7 400 aa10.64□□□□□ -0.71
DDX39B-218ENST00000478365 SULT6B1Q6IMI4 303 aa10.64□□□□□ -0.71
DDX39B-218ENST00000478365 CNKSR2Q8WXI2 1034 aa10.64□□□□□ -0.71
DDX39B-218ENST00000478365 SMARCC1Q92922 1105 aaPredicted RBP10.64□□□□□ -0.71
DDX39B-218ENST00000478365 PHKG2P15735 406 aa10.63□□□□□ -0.71
DDX39B-218ENST00000478365 PPP2R1AP30153 589 aa10.63□□□□□ -0.71
DDX39B-218ENST00000478365 SYTL4Q96C24 671 aaPredicted RBP10.63□□□□□ -0.71
DDX39B-218ENST00000478365 ACSBG1Q96GR2 724 aa10.63□□□□□ -0.71
DDX39B-218ENST00000478365 DCAF5Q96JK2 942 aa10.63□□□□□ -0.71
DDX39B-218ENST00000478365 ERVV-2B6SEH9 535 aa10.62□□□□□ -0.71
DDX39B-218ENST00000478365 KCNQ2O43526 872 aa10.62□□□□□ -0.71
DDX39B-218ENST00000478365 PRIM1P49642 420 aaKnown RBP10.62□□□□□ -0.71
DDX39B-218ENST00000478365 TXNRD1Q16881 649 aa10.62□□□□□ -0.71
DDX39B-218ENST00000478365 ZNF530Q6P9A1 599 aaPredicted RBP10.62□□□□□ -0.71
DDX39B-218ENST00000478365 ITGB4P16144 1822 aa10.61□□□□□ -0.71
DDX39B-218ENST00000478365 NEFMP07197 916 aa10.61□□□□□ -0.71
DDX39B-218ENST00000478365 DDX10Q13206 875 aaKnown RBP10.61□□□□□ -0.71
DDX39B-218ENST00000478365 GAS2L2Q8NHY3 880 aa10.61□□□□□ -0.71
DDX39B-218ENST00000478365 PNNQ9H307 717 aaKnown RBP10.61□□□□□ -0.71
DDX39B-218ENST00000478365 TMOD3Q9NYL9 352 aa10.61□□□□□ -0.71
DDX39B-218ENST00000478365 U2SURPO15042 1029 aaKnown RBP10.6□□□□□ -0.71
DDX39B-218ENST00000478365 AKAP4Q5JQC9 854 aa10.6□□□□□ -0.71
DDX39B-218ENST00000478365 AEBP1Q8IUX7 1158 aa10.6□□□□□ -0.71
DDX39B-218ENST00000478365 STK32BQ9NY57 414 aa10.6□□□□□ -0.71
DDX39B-218ENST00000478365 LY75O60449 1722 aa10.6□□□□□ -0.71
DDX39B-218ENST00000478365 FCHSD2O94868 740 aa10.59□□□□□ -0.71
DDX39B-218ENST00000478365 CNGB1Q14028 1251 aaPredicted RBP10.59□□□□□ -0.71
DDX39B-218ENST00000478365 MYBBP1AQ9BQG0 1328 aaKnown RBP10.58□□□□□ -0.71
DDX39B-218ENST00000478365 LRP5O75197 1615 aa10.58□□□□□ -0.72
DDX39B-218ENST00000478365 TOGARAM1Q9Y4F4 1720 aa10.58□□□□□ -0.72
DDX39B-218ENST00000478365 PALLDQ8WX93 1383 aa10.58□□□□□ -0.72
DDX39B-218ENST00000478365 ZNF316A6NFI3 1004 aaPredicted RBP10.58□□□□□ -0.72
DDX39B-218ENST00000478365 CENPBP07199 599 aaPredicted RBP10.58□□□□□ -0.72
DDX39B-218ENST00000478365 MPRIPQ6WCQ1 1025 aa10.58□□□□□ -0.72
DDX39B-218ENST00000478365 PTF1AQ7RTS3 328 aa10.58□□□□□ -0.72
DDX39B-218ENST00000478365 BCL11AQ9H165 835 aa10.58□□□□□ -0.72
DDX39B-218ENST00000478365 SCN11AQ9UI33 1791 aa10.57□□□□□ -0.72
DDX39B-218ENST00000478365 HMOX1P09601 288 aa10.57□□□□□ -0.72
DDX39B-218ENST00000478365 U2AF1L5P0DN76 240 aaPredicted RBP10.57□□□□□ -0.72
DDX39B-218ENST00000478365 CABP4P57796 275 aa10.57□□□□□ -0.72
DDX39B-218ENST00000478365 U2AF1Q01081 240 aaKnown RBP eCLIP10.57□□□□□ -0.723e-17■■■□□ 17.7
DDX39B-218ENST00000478365 CACNB1Q02641 598 aaPredicted RBP10.57□□□□□ -0.72
DDX39B-218ENST00000478365 R3HDM1Q15032 1099 aaKnown RBP10.57□□□□□ -0.72
DDX39B-218ENST00000478365 PROM2Q8N271 834 aa10.57□□□□□ -0.72
DDX39B-218ENST00000478365 RNF216Q9NWF9 866 aaPredicted RBP10.57□□□□□ -0.72
DDX39B-218ENST00000478365 CCNL1Q9UK58 526 aaPredicted RBP10.57□□□□□ -0.72
DDX39B-218ENST00000478365 QSER1Q2KHR3 1735 aa10.57□□□□□ -0.72
DDX39B-218ENST00000478365 PAPPAQ13219 1627 aa10.57□□□□□ -0.72
DDX39B-218ENST00000478365 SLC15A2Q16348 729 aa10.56□□□□□ -0.72
DDX39B-218ENST00000478365 FLAD1Q8NFF5 587 aa10.56□□□□□ -0.72
DDX39B-218ENST00000478365 PIGBQ92521 554 aa10.56□□□□□ -0.72
DDX39B-218ENST00000478365 ZNF831Q5JPB2 1677 aa10.56□□□□□ -0.72
DDX39B-218ENST00000478365 MRC1P22897 1456 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms