RNA–Protein interactions for RNA: ENST00000478327.1

NECTIN3-204, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 4

Gene NECTIN3, Length 549 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-204ENST00000478327 CDCA7Q9BWT1 371 aaPredicted RBP7.83□□□□□ -1.16
NECTIN3-204ENST00000478327 FAM187AA6NFU0 413 aa7.82□□□□□ -1.16
NECTIN3-204ENST00000478327 AVPP01185 164 aa7.82□□□□□ -1.16
NECTIN3-204ENST00000478327 SMPD1P17405 629 aa7.82□□□□□ -1.16
NECTIN3-204ENST00000478327 LARP1Q6PKG0 1096 aaKnown RBP7.82□□□□□ -1.16
NECTIN3-204ENST00000478327 CRIPAKQ8N1N5 446 aa7.82□□□□□ -1.16
NECTIN3-204ENST00000478327 LARGE2Q8N3Y3 721 aa7.82□□□□□ -1.16
NECTIN3-204ENST00000478327 ESF1Q9H501 851 aaKnown RBP7.82□□□□□ -1.16
NECTIN3-204ENST00000478327 J3QL48 77 aa7.81□□□□□ -1.16
NECTIN3-204ENST00000478327 GTF2IP78347 998 aa7.81□□□□□ -1.16
NECTIN3-204ENST00000478327 ZNF784Q8NCA9 323 aaPredicted RBP7.81□□□□□ -1.16
NECTIN3-204ENST00000478327 USTQ9Y2C2 406 aa7.81□□□□□ -1.16
NECTIN3-204ENST00000478327 USP17L15C9J2P7 530 aa7.8□□□□□ -1.16
NECTIN3-204ENST00000478327 USP17L10C9JJH3 530 aa7.8□□□□□ -1.16
NECTIN3-204ENST00000478327 USP17L13C9JLJ4 530 aa7.8□□□□□ -1.16
NECTIN3-204ENST00000478327 USP17L12C9JPN9 530 aa7.8□□□□□ -1.16
NECTIN3-204ENST00000478327 USP17L11C9JVI0 530 aa7.8□□□□□ -1.16
NECTIN3-204ENST00000478327 USP17L21D6R901 530 aa7.8□□□□□ -1.16
NECTIN3-204ENST00000478327 USP17L18D6R9N7 530 aa7.8□□□□□ -1.16
NECTIN3-204ENST00000478327 USP17L22D6RA61 530 aa7.8□□□□□ -1.16
NECTIN3-204ENST00000478327 USP17L17D6RBQ6 530 aa7.8□□□□□ -1.16
NECTIN3-204ENST00000478327 USP17L19D6RCP7 530 aa7.8□□□□□ -1.16
NECTIN3-204ENST00000478327 USP17L20D6RJB6 530 aa7.8□□□□□ -1.16
NECTIN3-204ENST00000478327 LILRA1O75019 489 aa7.8□□□□□ -1.16
NECTIN3-204ENST00000478327 RASA1P20936 1047 aa7.8□□□□□ -1.16
NECTIN3-204ENST00000478327 USP17L24Q0WX57 530 aa7.8□□□□□ -1.16
NECTIN3-204ENST00000478327 SIX5Q8N196 739 aa7.8□□□□□ -1.16
NECTIN3-204ENST00000478327 OGFOD1Q8N543 542 aa7.8□□□□□ -1.16
NECTIN3-204ENST00000478327 KLF16Q9BXK1 252 aaPredicted RBP7.8□□□□□ -1.16
NECTIN3-204ENST00000478327 TMPRSS4Q9NRS4 437 aa7.8□□□□□ -1.16
NECTIN3-204ENST00000478327 DNAAF2Q9NVR5 837 aaKnown RBP7.8□□□□□ -1.16
NECTIN3-204ENST00000478327 PODXL2Q9NZ53 605 aa7.8□□□□□ -1.16
NECTIN3-204ENST00000478327 CSB-PGBD3P0DP91 1061 aa7.79□□□□□ -1.16
NECTIN3-204ENST00000478327 SCTRP47872 440 aa7.79□□□□□ -1.16
NECTIN3-204ENST00000478327 PTK7Q13308 1070 aa7.79□□□□□ -1.16
NECTIN3-204ENST00000478327 CTC1Q2NKJ3 1217 aa7.79□□□□□ -1.16
NECTIN3-204ENST00000478327 CYP2U1Q7Z449 544 aa7.79□□□□□ -1.16
NECTIN3-204ENST00000478327 OSBPL3Q9H4L5 887 aa7.79□□□□□ -1.16
NECTIN3-204ENST00000478327 CYLDQ9NQC7 956 aa7.79□□□□□ -1.16
NECTIN3-204ENST00000478327 PCDHGA11Q9Y5H2 935 aa7.79□□□□□ -1.16
NECTIN3-204ENST00000478327 WASLO00401 505 aaPredicted RBP7.78□□□□□ -1.16
NECTIN3-204ENST00000478327 SMCPP49901 116 aaPredicted RBP7.78□□□□□ -1.16
NECTIN3-204ENST00000478327 CLDN10P78369 228 aa7.78□□□□□ -1.16
NECTIN3-204ENST00000478327 CRTC2Q53ET0 693 aaPredicted RBP7.78□□□□□ -1.16
NECTIN3-204ENST00000478327 ZBTB7BO15156 539 aaPredicted RBP7.77□□□□□ -1.17
NECTIN3-204ENST00000478327 ZIC2O95409 532 aaPredicted RBP7.77□□□□□ -1.17
NECTIN3-204ENST00000478327 TIMP2P16035 220 aa7.77□□□□□ -1.17
NECTIN3-204ENST00000478327 WDR4P57081 412 aaKnown RBP7.77□□□□□ -1.17
NECTIN3-204ENST00000478327 CDCA8Q53HL2 280 aa7.77□□□□□ -1.17
NECTIN3-204ENST00000478327 Q6ZVU0 165 aa7.77□□□□□ -1.17
NECTIN3-204ENST00000478327 ANKMY2Q8IV38 441 aa7.77□□□□□ -1.17
NECTIN3-204ENST00000478327 NOVA2Q9UNW9 492 aaKnown RBP7.77□□□□□ -1.17
NECTIN3-204ENST00000478327 M0R2N6 131 aa7.76□□□□□ -1.17
NECTIN3-204ENST00000478327 GNRH1P01148 92 aa7.76□□□□□ -1.17
NECTIN3-204ENST00000478327 ADH1AP07327 375 aa7.76□□□□□ -1.17
NECTIN3-204ENST00000478327 RETREG2Q8NC44 543 aa7.76□□□□□ -1.17
NECTIN3-204ENST00000478327 ITPKCQ96DU7 683 aa7.76□□□□□ -1.17
NECTIN3-204ENST00000478327 RBM19Q9Y4C8 960 aaKnown RBP7.76□□□□□ -1.17
NECTIN3-204ENST00000478327 DKK1O94907 266 aa7.75□□□□□ -1.17
NECTIN3-204ENST00000478327 PSME1Q06323 249 aa7.75□□□□□ -1.17
NECTIN3-204ENST00000478327 CCDC102BQ68D86 513 aa7.75□□□□□ -1.17
NECTIN3-204ENST00000478327 FAM200AQ8TCP9 573 aa7.75□□□□□ -1.17
NECTIN3-204ENST00000478327 AAASQ9NRG9 546 aa7.75□□□□□ -1.17
NECTIN3-204ENST00000478327 ZMIZ1Q9ULJ6 1067 aa7.75□□□□□ -1.17
NECTIN3-204ENST00000478327 ADD1P35611 737 aaKnown RBP7.74□□□□□ -1.17
NECTIN3-204ENST00000478327 DPYDQ12882 1025 aa7.74□□□□□ -1.17
NECTIN3-204ENST00000478327 ESCO1Q5FWF5 840 aa7.74□□□□□ -1.17
NECTIN3-204ENST00000478327 MEIOBQ8N635 442 aa7.74□□□□□ -1.17
NECTIN3-204ENST00000478327 TPCN2Q8NHX9 752 aa7.74□□□□□ -1.17
NECTIN3-204ENST00000478327 HPS1Q92902 700 aa7.74□□□□□ -1.17
NECTIN3-204ENST00000478327 ZNF594Q96JF6 807 aaPredicted RBP7.74□□□□□ -1.17
NECTIN3-204ENST00000478327 TRAIPQ9BWF2 469 aa7.74□□□□□ -1.17
NECTIN3-204ENST00000478327 KIAA1024Q9UPX6 916 aa7.74□□□□□ -1.17
NECTIN3-204ENST00000478327 SEC13P55735 322 aa7.73□□□□□ -1.17
NECTIN3-204ENST00000478327 SWI5Q1ZZU3 235 aa7.73□□□□□ -1.17
NECTIN3-204ENST00000478327 ZFAND3Q9H8U3 227 aa7.73□□□□□ -1.17
NECTIN3-204ENST00000478327 TMEM88BA6NKF7 163 aa7.72□□□□□ -1.17
NECTIN3-204ENST00000478327 BACH1O14867 736 aa7.72□□□□□ -1.17
NECTIN3-204ENST00000478327 SCNN1DP51172 638 aa7.72□□□□□ -1.17
NECTIN3-204ENST00000478327 TMEM229AB2RXF0 380 aa7.71□□□□□ -1.18
NECTIN3-204ENST00000478327 AXIN1O15169 862 aa7.71□□□□□ -1.18
NECTIN3-204ENST00000478327 CAPN5O15484 640 aaPredicted RBP7.71□□□□□ -1.18
NECTIN3-204ENST00000478327 INHAP05111 366 aa7.71□□□□□ -1.18
NECTIN3-204ENST00000478327 PDIA4P13667 645 aaKnown RBP7.71□□□□□ -1.18
NECTIN3-204ENST00000478327 PTGIRP43119 386 aa7.71□□□□□ -1.18
NECTIN3-204ENST00000478327 GDF10P55107 478 aa7.71□□□□□ -1.18
NECTIN3-204ENST00000478327 CBLBQ13191 982 aa7.71□□□□□ -1.18
NECTIN3-204ENST00000478327 TMEM164Q5U3C3 297 aa7.71□□□□□ -1.18
NECTIN3-204ENST00000478327 STK32AQ8WU08 396 aa7.71□□□□□ -1.18
NECTIN3-204ENST00000478327 SLC4A9Q96Q91 983 aa7.71□□□□□ -1.18
NECTIN3-204ENST00000478327 TSEN34Q9BSV6 310 aaKnown RBP7.71□□□□□ -1.18
NECTIN3-204ENST00000478327 ST8SIA5O15466 376 aa7.7□□□□□ -1.18
NECTIN3-204ENST00000478327 CLN3Q13286 438 aa7.7□□□□□ -1.18
NECTIN3-204ENST00000478327 B4GALNT3Q6L9W6 998 aa7.7□□□□□ -1.18
NECTIN3-204ENST00000478327 KDF1Q8NAX2 398 aaPredicted RBP7.7□□□□□ -1.18
NECTIN3-204ENST00000478327 CLP1Q92989 425 aaKnown RBP7.7□□□□□ -1.18
NECTIN3-204ENST00000478327 XAGE2Q96GT9 111 aa7.7□□□□□ -1.18
NECTIN3-204ENST00000478327 ETNK1Q9HBU6 452 aa7.7□□□□□ -1.18
NECTIN3-204ENST00000478327 ZNF358Q9NW07 568 aa7.7□□□□□ -1.18
NECTIN3-204ENST00000478327 FAM69CQ0P6D2 419 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms