RNA–Protein interactions for RNA: ENST00000478085.5

SGSM3-209, Transcript of small G protein signaling modulator 3, humanhuman

TSL 2

Gene SGSM3, Length 4,218 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-209ENST00000478085 CCDC27Q2M243 656 aa14.45□□□□□ -0.1
SGSM3-209ENST00000478085 DNAJC2Q99543 621 aaKnown RBP14.45□□□□□ -0.1
SGSM3-209ENST00000478085 KDM5DQ9BY66 1539 aa14.45□□□□□ -0.1
SGSM3-209ENST00000478085 PI4KAP2A4QPH2 592 aa14.45□□□□□ -0.1
SGSM3-209ENST00000478085 TOM1O60784 492 aa14.45□□□□□ -0.1
SGSM3-209ENST00000478085 STARD3NLO95772 234 aa14.45□□□□□ -0.1
SGSM3-209ENST00000478085 PI4KAP1Q8N8J0 262 aa14.45□□□□□ -0.1
SGSM3-209ENST00000478085 FSD1Q9BTV5 496 aa14.45□□□□□ -0.1
SGSM3-209ENST00000478085 SMARCA5O60264 1052 aaPredicted RBP14.45□□□□□ -0.1
SGSM3-209ENST00000478085 WASHC4Q2M389 1173 aa14.45□□□□□ -0.1
SGSM3-209ENST00000478085 NPC1L1Q9UHC9 1359 aa14.44□□□□□ -0.1
SGSM3-209ENST00000478085 IP6K1Q92551 441 aa14.44□□□□□ -0.1
SGSM3-209ENST00000478085 BICDL1Q6ZP65 573 aa14.44□□□□□ -0.1
SGSM3-209ENST00000478085 FMNL2Q96PY5 1086 aa14.44□□□□□ -0.1
SGSM3-209ENST00000478085 MYD88Q99836 296 aa14.44□□□□□ -0.1
SGSM3-209ENST00000478085 TRPM2O94759 1503 aa14.44□□□□□ -0.1
SGSM3-209ENST00000478085 LRRFIP1Q32MZ4 808 aaKnown RBP14.44□□□□□ -0.1
SGSM3-209ENST00000478085 DNAAF4Q8WXU2 420 aa14.44□□□□□ -0.1
SGSM3-209ENST00000478085 CNNM1Q9NRU3 951 aa14.43□□□□□ -0.1
SGSM3-209ENST00000478085 GLIPR1L2Q4G1C9 344 aa14.43□□□□□ -0.1
SGSM3-209ENST00000478085 IGHDP01880 384 aa14.43□□□□□ -0.1
SGSM3-209ENST00000478085 LARP1Q6PKG0 1096 aaKnown RBP14.43□□□□□ -0.1
SGSM3-209ENST00000478085 PHF23Q9BUL5 403 aaPredicted RBP14.43□□□□□ -0.1
SGSM3-209ENST00000478085 ZBTB3Q9H5J0 574 aa14.43□□□□□ -0.1
SGSM3-209ENST00000478085 EDC4Q6P2E9 1401 aaKnown RBP14.43□□□□□ -0.1
SGSM3-209ENST00000478085 PIP4K2AP48426 406 aaPredicted RBP14.42□□□□□ -0.1
SGSM3-209ENST00000478085 NFATC2IPQ8NCF5 419 aa14.42□□□□□ -0.1
SGSM3-209ENST00000478085 ZCRB1Q8TBF4 217 aaKnown RBP14.42□□□□□ -0.1
SGSM3-209ENST00000478085 DNAJC5Q9H3Z4 198 aa14.42□□□□□ -0.1
SGSM3-209ENST00000478085 CDC42BPBQ9Y5S2 1711 aa14.42□□□□□ -0.1
SGSM3-209ENST00000478085 CNTROBQ8N137 903 aa14.42□□□□□ -0.1
SGSM3-209ENST00000478085 SIRT1Q96EB6 747 aa14.42□□□□□ -0.1
SGSM3-209ENST00000478085 LRRFIP2Q9Y608 721 aaKnown RBP14.42□□□□□ -0.1
SGSM3-209ENST00000478085 CCDC57Q2TAC2 916 aa14.42□□□□□ -0.1
SGSM3-209ENST00000478085 JARID2Q92833 1246 aaPredicted RBP14.42□□□□□ -0.1
SGSM3-209ENST00000478085 ERVK-7P63135 1459 aa14.42□□□□□ -0.1
SGSM3-209ENST00000478085 ATP5J2-PTCD1G3V325 749 aa14.42□□□□□ -0.1
SGSM3-209ENST00000478085 VAMP4O75379 141 aa14.42□□□□□ -0.1
SGSM3-209ENST00000478085 SBNO2Q9Y2G9 1366 aa14.41□□□□□ -0.1
SGSM3-209ENST00000478085 SLAIN2Q9P270 581 aa14.41□□□□□ -0.1
SGSM3-209ENST00000478085 ABCC3O15438 1527 aa14.41□□□□□ -0.1
SGSM3-209ENST00000478085 NUTM1Q86Y26 1132 aa14.41□□□□□ -0.1
SGSM3-209ENST00000478085 PCDHB15Q9Y5E8 787 aa14.41□□□□□ -0.1
SGSM3-209ENST00000478085 ARAP3Q8WWN8 1544 aa14.41□□□□□ -0.1
SGSM3-209ENST00000478085 ROBO2Q9HCK4 1378 aa14.41□□□□□ -0.1
SGSM3-209ENST00000478085 RLBP1P12271 317 aa14.41□□□□□ -0.1
SGSM3-209ENST00000478085 FBXW7Q969H0 707 aa14.41□□□□□ -0.1
SGSM3-209ENST00000478085 EFCAB6Q5THR3 1501 aa14.41□□□□□ -0.1
SGSM3-209ENST00000478085 AACSQ86V21 672 aa14.4□□□□□ -0.1
SGSM3-209ENST00000478085 AKAP4Q5JQC9 854 aa14.4□□□□□ -0.1
SGSM3-209ENST00000478085 ERC1Q8IUD2 1116 aa14.4□□□□□ -0.1
SGSM3-209ENST00000478085 KLHL34Q8N239 644 aa14.4□□□□□ -0.1
SGSM3-209ENST00000478085 CHPF2Q9P2E5 772 aa14.4□□□□□ -0.1
SGSM3-209ENST00000478085 LRRIQ1Q96JM4 1722 aa14.4□□□□□ -0.1
SGSM3-209ENST00000478085 MAP3K2Q9Y2U5 619 aa14.39□□□□□ -0.11
SGSM3-209ENST00000478085 RNF20Q5VTR2 975 aa14.39□□□□□ -0.11
SGSM3-209ENST00000478085 HYPKQ9NX55 129 aa14.39□□□□□ -0.11
SGSM3-209ENST00000478085 TRIM35Q9UPQ4 493 aa14.39□□□□□ -0.11
SGSM3-209ENST00000478085 A0A087WZG4 1122 aa14.39□□□□□ -0.11
SGSM3-209ENST00000478085 GPTP24298 496 aa14.39□□□□□ -0.11
SGSM3-209ENST00000478085 NBPF6Q5VWK0 638 aa14.39□□□□□ -0.11
SGSM3-209ENST00000478085 NBPF4Q96M43 638 aa14.39□□□□□ -0.11
SGSM3-209ENST00000478085 C8orf37Q96NL8 207 aa14.39□□□□□ -0.11
SGSM3-209ENST00000478085 MEIS3Q99687 375 aa14.39□□□□□ -0.11
SGSM3-209ENST00000478085 MPHOSPH8Q99549 860 aa14.38□□□□□ -0.11
SGSM3-209ENST00000478085 CEP126Q9P2H0 1117 aa14.38□□□□□ -0.11
SGSM3-209ENST00000478085 PTPRCP08575 1304 aa14.38□□□□□ -0.11
SGSM3-209ENST00000478085 PRR36Q9H6K5 1346 aa14.38□□□□□ -0.11
SGSM3-209ENST00000478085 SNRPA1P09661 255 aaKnown RBP14.38□□□□□ -0.11
SGSM3-209ENST00000478085 NEK4P51957 841 aa14.38□□□□□ -0.11
SGSM3-209ENST00000478085 ACSBG1Q96GR2 724 aa14.38□□□□□ -0.11
SGSM3-209ENST00000478085 ZFYVE9O95405 1425 aa14.38□□□□□ -0.11
SGSM3-209ENST00000478085 PLXNC1O60486 1568 aa14.37□□□□□ -0.11
SGSM3-209ENST00000478085 FAM184AQ8NB25 1140 aa14.37□□□□□ -0.11
SGSM3-209ENST00000478085 BTG4Q9NY30 223 aa14.37□□□□□ -0.11
SGSM3-209ENST00000478085 LMTK3Q96Q04 1460 aa14.37□□□□□ -0.11
SGSM3-209ENST00000478085 PLEKHG1Q9ULL1 1385 aa14.37□□□□□ -0.11
SGSM3-209ENST00000478085 COPS6Q7L5N1 327 aa14.36□□□□□ -0.11
SGSM3-209ENST00000478085 MRPL50Q8N5N7 158 aaKnown RBP14.36□□□□□ -0.11
SGSM3-209ENST00000478085 LGR6Q9HBX8 967 aa14.36□□□□□ -0.11
SGSM3-209ENST00000478085 FKBP4Q02790 459 aaKnown RBP eCLIP14.36□□□□□ -0.11
SGSM3-209ENST00000478085 TRDNQ13061 729 aa14.36□□□□□ -0.11
SGSM3-209ENST00000478085 IL2RBP14784 551 aa14.35□□□□□ -0.11
SGSM3-209ENST00000478085 ANKRD13DQ6ZTN6 518 aa14.35□□□□□ -0.11
SGSM3-209ENST00000478085 UBE3BQ7Z3V4 1068 aa14.35□□□□□ -0.11
SGSM3-209ENST00000478085 MYOM2P54296 1465 aa14.35□□□□□ -0.11
SGSM3-209ENST00000478085 H3BQV1 296 aa14.35□□□□□ -0.11
SGSM3-209ENST00000478085 CCDC158Q5M9N0 1113 aa14.35□□□□□ -0.11
SGSM3-209ENST00000478085 IFFO2Q5TF58 517 aa14.35□□□□□ -0.11
SGSM3-209ENST00000478085 XAGE3Q8WTP9 111 aa14.35□□□□□ -0.11
SGSM3-209ENST00000478085 KIF1BPQ96EK5 621 aa14.35□□□□□ -0.11
SGSM3-209ENST00000478085 ABCA9Q8IUA7 1624 aa14.35□□□□□ -0.11
SGSM3-209ENST00000478085 ARHGAP31Q2M1Z3 1444 aa14.35□□□□□ -0.11
SGSM3-209ENST00000478085 SBNO1A3KN83 1393 aa14.34□□□□□ -0.11
SGSM3-209ENST00000478085 HTATSF1O43719 755 aaKnown RBP14.34□□□□□ -0.11
SGSM3-209ENST00000478085 TMEM94Q12767 1356 aa14.34□□□□□ -0.11
SGSM3-209ENST00000478085 MCTP1Q6DN14 999 aa14.34□□□□□ -0.11
SGSM3-209ENST00000478085 ARHGAP45Q92619 1136 aa14.34□□□□□ -0.11
SGSM3-209ENST00000478085 KDM5CP41229 1560 aa14.34□□□□□ -0.11
SGSM3-209ENST00000478085 NOL10Q9BSC4 688 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms