RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 NHSQ6T4R5 1651 aa18.98■□□□□ 0.63
SOX2-OT-208ENST00000477928 TXNRD1Q16881 649 aa18.97■□□□□ 0.63
SOX2-OT-208ENST00000477928 ZCRB1Q8TBF4 217 aaKnown RBP18.97■□□□□ 0.63
SOX2-OT-208ENST00000477928 SHANK3Q9BYB0 1731 aa18.95■□□□□ 0.62
SOX2-OT-208ENST00000477928 ANKRD26Q9UPS8 1709 aa18.95■□□□□ 0.62
SOX2-OT-208ENST00000477928 WASHC2AQ641Q2 1341 aa18.95■□□□□ 0.62
SOX2-OT-208ENST00000477928 LRP5O75197 1615 aa18.94■□□□□ 0.62
SOX2-OT-208ENST00000477928 KCNQ4P56696 695 aa18.94■□□□□ 0.62
SOX2-OT-208ENST00000477928 NBPF14Q5TI25 921 aa18.94■□□□□ 0.62
SOX2-OT-208ENST00000477928 RAPGEF4Q8WZA2 1011 aa18.94■□□□□ 0.62
SOX2-OT-208ENST00000477928 PRIM1P49642 420 aaKnown RBP18.93■□□□□ 0.62
SOX2-OT-208ENST00000477928 EIF4A2Q14240 407 aaKnown RBP18.93■□□□□ 0.62
SOX2-OT-208ENST00000477928 SYTL4Q96C24 671 aaPredicted RBP18.93■□□□□ 0.62
SOX2-OT-208ENST00000477928 EYA1Q99502 592 aa18.93■□□□□ 0.62
SOX2-OT-208ENST00000477928 RGPD3A6NKT7 1758 aaPredicted RBP18.92■□□□□ 0.62
SOX2-OT-208ENST00000477928 RGPD4Q7Z3J3 1758 aa18.92■□□□□ 0.62
SOX2-OT-208ENST00000477928 TATP17735 454 aaPredicted RBP18.92■□□□□ 0.62
SOX2-OT-208ENST00000477928 LRRC4BQ9NT99 713 aa18.92■□□□□ 0.62
SOX2-OT-208ENST00000477928 NCAPD2Q15021 1401 aa18.91■□□□□ 0.62
SOX2-OT-208ENST00000477928 CYP27B1O15528 508 aa18.91■□□□□ 0.62
SOX2-OT-208ENST00000477928 AMER1Q5JTC6 1135 aaPredicted RBP18.9■□□□□ 0.62
SOX2-OT-208ENST00000477928 MORC1Q86VD1 984 aa18.9■□□□□ 0.62
SOX2-OT-208ENST00000477928 PIAS4Q8N2W9 510 aaPredicted RBP18.9■□□□□ 0.62
SOX2-OT-208ENST00000477928 KNSTRNQ9Y448 316 aa18.9■□□□□ 0.62
SOX2-OT-208ENST00000477928 MAP2P11137 1827 aaKnown RBP18.9■□□□□ 0.62
SOX2-OT-208ENST00000477928 DOT1LQ8TEK3 1739 aa18.89■□□□□ 0.61
SOX2-OT-208ENST00000477928 BTAF1O14981 1849 aa18.89■□□□□ 0.61
SOX2-OT-208ENST00000477928 ZNF827Q17R98 1081 aa18.89■□□□□ 0.61
SOX2-OT-208ENST00000477928 CNGB1Q14028 1251 aaPredicted RBP18.87■□□□□ 0.61
SOX2-OT-208ENST00000477928 PAPPAQ13219 1627 aa18.86■□□□□ 0.61
SOX2-OT-208ENST00000477928 PCDH11XQ9BZA7 1347 aa18.86■□□□□ 0.61
SOX2-OT-208ENST00000477928 PCDH11YQ9BZA8 1340 aa18.86■□□□□ 0.61
SOX2-OT-208ENST00000477928 SLC15A2Q16348 729 aa18.86■□□□□ 0.61
SOX2-OT-208ENST00000477928 PER1O15534 1290 aaPredicted RBP18.85■□□□□ 0.61
SOX2-OT-208ENST00000477928 ZBTB7AO95365 584 aa18.85■□□□□ 0.61
SOX2-OT-208ENST00000477928 STK32BQ9NY57 414 aa18.85■□□□□ 0.61
SOX2-OT-208ENST00000477928 NPC1L1Q9UHC9 1359 aa18.84■□□□□ 0.61
SOX2-OT-208ENST00000477928 CC2D1BQ5T0F9 858 aaKnown RBP18.84■□□□□ 0.61
SOX2-OT-208ENST00000477928 AEBP1Q8IUX7 1158 aa18.84■□□□□ 0.61
SOX2-OT-208ENST00000477928 PLEKHG2Q9H7P9 1386 aa18.83■□□□□ 0.61
SOX2-OT-208ENST00000477928 IGSF1Q8N6C5 1336 aa18.83■□□□□ 0.61
SOX2-OT-208ENST00000477928 CASZ1Q86V15 1759 aa18.83■□□□□ 0.6
SOX2-OT-208ENST00000477928 TOGARAM1Q9Y4F4 1720 aa18.83■□□□□ 0.6
SOX2-OT-208ENST00000477928 PKD1L3Q7Z443 1732 aa18.81■□□□□ 0.6
SOX2-OT-208ENST00000477928 ATF5Q9Y2D1 282 aaPredicted RBP18.81■□□□□ 0.6
SOX2-OT-208ENST00000477928 MPRIPQ6WCQ1 1025 aa18.8■□□□□ 0.6
SOX2-OT-208ENST00000477928 AKT1S1Q96B36 256 aa18.8■□□□□ 0.6
SOX2-OT-208ENST00000477928 SPON1Q9HCB6 807 aa18.8■□□□□ 0.6
SOX2-OT-208ENST00000477928 PHKG2P15735 406 aa18.78■□□□□ 0.6
SOX2-OT-208ENST00000477928 PTGER2P43116 358 aa18.78■□□□□ 0.6
SOX2-OT-208ENST00000477928 PIGBQ92521 554 aa18.78■□□□□ 0.6
SOX2-OT-208ENST00000477928 SPG7Q9UQ90 795 aa18.78■□□□□ 0.6
SOX2-OT-208ENST00000477928 IL13P35225 146 aa18.77■□□□□ 0.6
SOX2-OT-208ENST00000477928 MTHFSP49914 203 aa18.77■□□□□ 0.6
SOX2-OT-208ENST00000477928 NKX1-1Q15270 411 aaPredicted RBP18.77■□□□□ 0.6
SOX2-OT-208ENST00000477928 CCNL1Q9UK58 526 aaPredicted RBP18.77■□□□□ 0.6
SOX2-OT-208ENST00000477928 SLC27A3Q5K4L6 730 aa18.76■□□□□ 0.59
SOX2-OT-208ENST00000477928 PALLDQ8WX93 1383 aa18.76■□□□□ 0.59
SOX2-OT-208ENST00000477928 PNPLA7Q6ZV29 1317 aa18.75■□□□□ 0.59
SOX2-OT-208ENST00000477928 SULT6B1Q6IMI4 303 aa18.74■□□□□ 0.59
SOX2-OT-208ENST00000477928 SMIM5Q71RC9 77 aa18.74■□□□□ 0.59
SOX2-OT-208ENST00000477928 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.74■□□□□ 0.59
SOX2-OT-208ENST00000477928 PPP1R1BQ9UD71 204 aaPredicted RBP18.74■□□□□ 0.59
SOX2-OT-208ENST00000477928 AMIGO3Q86WK7 504 aa18.73■□□□□ 0.59
SOX2-OT-208ENST00000477928 KAT6BQ8WYB5 2073 aa18.73■□□□□ 0.59
SOX2-OT-208ENST00000477928 LY75O60449 1722 aa18.72■□□□□ 0.59
SOX2-OT-208ENST00000477928 ZNF530Q6P9A1 599 aaPredicted RBP18.72■□□□□ 0.59
SOX2-OT-208ENST00000477928 IFNL2Q8IZJ0 200 aa18.72■□□□□ 0.59
SOX2-OT-208ENST00000477928 SGIP1Q9BQI5 828 aa18.72■□□□□ 0.59
SOX2-OT-208ENST00000477928 ASAP1Q9ULH1 1129 aa18.72■□□□□ 0.59
SOX2-OT-208ENST00000477928 KDM6AO15550 1401 aaPredicted RBP18.72■□□□□ 0.59
SOX2-OT-208ENST00000477928 HMOX1P09601 288 aa18.71■□□□□ 0.59
SOX2-OT-208ENST00000477928 ZEB1P37275 1124 aaPredicted RBP18.71■□□□□ 0.59
SOX2-OT-208ENST00000477928 MTFR1LQ9H019 292 aa18.71■□□□□ 0.59
SOX2-OT-208ENST00000477928 TFCP2L1Q9NZI6 479 aa18.71■□□□□ 0.59
SOX2-OT-208ENST00000477928 KDRP35968 1356 aa18.7■□□□□ 0.58
SOX2-OT-208ENST00000477928 TMOD3Q9NYL9 352 aa18.7■□□□□ 0.58
SOX2-OT-208ENST00000477928 COL3A1P02461 1466 aaPredicted RBP18.7■□□□□ 0.58
SOX2-OT-208ENST00000477928 HMGB2P26583 209 aaKnown RBP18.68■□□□□ 0.58
SOX2-OT-208ENST00000477928 PLEKHO1Q53GL0 409 aaPredicted RBP18.68■□□□□ 0.58
SOX2-OT-208ENST00000477928 ITPK1Q13572 414 aa18.67■□□□□ 0.58
SOX2-OT-208ENST00000477928 COL23A1Q86Y22 540 aaPredicted RBP18.67■□□□□ 0.58
SOX2-OT-208ENST00000477928 LINC00116Q8NCU8 138 aa18.67■□□□□ 0.58
SOX2-OT-208ENST00000477928 ATG3Q9NT62 314 aa18.67■□□□□ 0.58
SOX2-OT-208ENST00000477928 TUBGCP6Q96RT7 1819 aa18.67■□□□□ 0.58
SOX2-OT-208ENST00000477928 ITGB4P16144 1822 aa18.66■□□□□ 0.58
SOX2-OT-208ENST00000477928 MSL1Q68DK7 614 aa18.66■□□□□ 0.58
SOX2-OT-208ENST00000477928 SLC4A9Q96Q91 983 aa18.66■□□□□ 0.58
SOX2-OT-208ENST00000477928 FHDC1Q9C0D6 1143 aaPredicted RBP18.66■□□□□ 0.58
SOX2-OT-208ENST00000477928 LOC102724428A0A0B4J2F2 783 aa18.65■□□□□ 0.58
SOX2-OT-208ENST00000477928 SIK1P57059 783 aa18.65■□□□□ 0.58
SOX2-OT-208ENST00000477928 SMARCC1Q92922 1105 aaPredicted RBP18.65■□□□□ 0.58
SOX2-OT-208ENST00000477928 DIAPH1O60610 1272 aaKnown RBP18.64■□□□□ 0.57
SOX2-OT-208ENST00000477928 AMOTQ4VCS5 1084 aa18.64■□□□□ 0.57
SOX2-OT-208ENST00000477928 DCAF5Q96JK2 942 aa18.64■□□□□ 0.57
SOX2-OT-208ENST00000477928 C5P01031 1676 aa18.63■□□□□ 0.57
SOX2-OT-208ENST00000477928 PHF14O94880 888 aa18.62■□□□□ 0.57
SOX2-OT-208ENST00000477928 C1orf141Q5JVX7 400 aa18.62■□□□□ 0.57
SOX2-OT-208ENST00000477928 ARXQ96QS3 562 aa18.62■□□□□ 0.57
SOX2-OT-208ENST00000477928 LGR6Q9HBX8 967 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms