RNA–Protein interactions for RNA: ENST00000477817.1

PKP1-205, Transcript of plakophilin 1, humanhuman

TSL 1 (best)

Gene PKP1, Length 631 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP1-205ENST00000477817 C16orf71Q8IYS4 520 aaPredicted RBP16.49■□□□□ 0.23
PKP1-205ENST00000477817 USP47Q96K76 1375 aa16.49■□□□□ 0.23
PKP1-205ENST00000477817 IGSF1Q8N6C5 1336 aa16.48■□□□□ 0.23
PKP1-205ENST00000477817 TOMM70O94826 608 aa16.48■□□□□ 0.23
PKP1-205ENST00000477817 HMGB2P26583 209 aaKnown RBP16.48■□□□□ 0.23
PKP1-205ENST00000477817 COL13A1Q5TAT6 717 aaPredicted RBP16.48■□□□□ 0.23
PKP1-205ENST00000477817 FLAD1Q8NFF5 587 aa16.48■□□□□ 0.23
PKP1-205ENST00000477817 LTN1O94822 1766 aa16.48■□□□□ 0.23
PKP1-205ENST00000477817 ANKRD36BQ8N2N9 1353 aa16.47■□□□□ 0.23
PKP1-205ENST00000477817 DOT1LQ8TEK3 1739 aa16.47■□□□□ 0.23
PKP1-205ENST00000477817 LY75O60449 1722 aa16.45■□□□□ 0.22
PKP1-205ENST00000477817 GOLGB1Q14789 3259 aaKnown RBP16.45■□□□□ 0.22
PKP1-205ENST00000477817 DNAJC5GQ8N7S2 189 aa16.44■□□□□ 0.22
PKP1-205ENST00000477817 AK7Q96M32 723 aa16.43■□□□□ 0.22
PKP1-205ENST00000477817 PHF14O94880 888 aa16.42■□□□□ 0.22
PKP1-205ENST00000477817 PRELPP51888 382 aa16.42■□□□□ 0.22
PKP1-205ENST00000477817 NME9Q86XW9 330 aa16.42■□□□□ 0.22
PKP1-205ENST00000477817 ZCRB1Q8TBF4 217 aaKnown RBP16.42■□□□□ 0.22
PKP1-205ENST00000477817 TMC1Q8TDI8 760 aa16.41■□□□□ 0.22
PKP1-205ENST00000477817 KLRG1Q96E93 195 aa16.41■□□□□ 0.22
PKP1-205ENST00000477817 WDR90Q96KV7 1748 aa16.41■□□□□ 0.22
PKP1-205ENST00000477817 HDGFL2Q7Z4V5 671 aaPredicted RBP16.4■□□□□ 0.22
PKP1-205ENST00000477817 C5P01031 1676 aa16.4■□□□□ 0.22
PKP1-205ENST00000477817 HTRA3P83110 453 aa16.39■□□□□ 0.21
PKP1-205ENST00000477817 ARHGAP27Q6ZUM4 889 aa16.38■□□□□ 0.21
PKP1-205ENST00000477817 NMRK2Q9NPI5 230 aa16.38■□□□□ 0.21
PKP1-205ENST00000477817 BCS1LQ9Y276 419 aa16.38■□□□□ 0.21
PKP1-205ENST00000477817 NSD2O96028 1365 aa16.38■□□□□ 0.21
PKP1-205ENST00000477817 USP31Q70CQ4 1352 aa16.38■□□□□ 0.21
PKP1-205ENST00000477817 FAM208AQ9UK61 1670 aaKnown RBP16.37■□□□□ 0.21
PKP1-205ENST00000477817 IP6K1Q92551 441 aa16.37■□□□□ 0.21
PKP1-205ENST00000477817 AMPHP49418 695 aa16.36■□□□□ 0.21
PKP1-205ENST00000477817 RBM46Q8TBY0 533 aaKnown RBP16.36■□□□□ 0.21
PKP1-205ENST00000477817 MON2Q7Z3U7 1717 aa16.36■□□□□ 0.21
PKP1-205ENST00000477817 MPRIPQ6WCQ1 1025 aa16.35■□□□□ 0.21
PKP1-205ENST00000477817 JMYQ8N9B5 988 aa16.34■□□□□ 0.21
PKP1-205ENST00000477817 RAPGEF4Q8WZA2 1011 aa16.34■□□□□ 0.21
PKP1-205ENST00000477817 PALLDQ8WX93 1383 aa16.34■□□□□ 0.21
PKP1-205ENST00000477817 NSD3Q9BZ95 1437 aa16.34■□□□□ 0.21
PKP1-205ENST00000477817 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.33■□□□□ 0.2
PKP1-205ENST00000477817 FSTL1Q12841 308 aa16.32■□□□□ 0.2
PKP1-205ENST00000477817 SMARCC1Q92922 1105 aaPredicted RBP16.32■□□□□ 0.2
PKP1-205ENST00000477817 TAF1LQ8IZX4 1826 aa16.31■□□□□ 0.2
PKP1-205ENST00000477817 TATP17735 454 aaPredicted RBP16.31■□□□□ 0.2
PKP1-205ENST00000477817 SMIM5Q71RC9 77 aa16.31■□□□□ 0.2
PKP1-205ENST00000477817 TERF2IPQ9NYB0 399 aa16.31■□□□□ 0.2
PKP1-205ENST00000477817 C4BP0C0L5 1744 aa16.31■□□□□ 0.2
PKP1-205ENST00000477817 USP54Q70EL1 1684 aa16.3■□□□□ 0.2
PKP1-205ENST00000477817 ROCK2O75116 1388 aaKnown RBP16.3■□□□□ 0.2
PKP1-205ENST00000477817 KDM2BQ8NHM5 1336 aa16.3■□□□□ 0.2
PKP1-205ENST00000477817 FCHSD2O94868 740 aa16.3■□□□□ 0.2
PKP1-205ENST00000477817 A0A0G2JLW4 131 aa16.29■□□□□ 0.2
PKP1-205ENST00000477817 SSFA2P28290 1259 aa16.29■□□□□ 0.2
PKP1-205ENST00000477817 USHBP1Q8N6Y0 703 aa16.29■□□□□ 0.2
PKP1-205ENST00000477817 RGPD2P0DJD1 1756 aa16.28■□□□□ 0.2
PKP1-205ENST00000477817 SBNO2Q9Y2G9 1366 aa16.28■□□□□ 0.2
PKP1-205ENST00000477817 MMP10P09238 476 aa16.28■□□□□ 0.2
PKP1-205ENST00000477817 HOXC9P31274 260 aa16.28■□□□□ 0.2
PKP1-205ENST00000477817 C9orf131Q5VYM1 1079 aa16.28■□□□□ 0.2
PKP1-205ENST00000477817 COG3Q96JB2 828 aa16.28■□□□□ 0.2
PKP1-205ENST00000477817 MEGF6O75095 1541 aa16.28■□□□□ 0.2
PKP1-205ENST00000477817 N4BP2Q86UW6 1770 aaPredicted RBP16.28■□□□□ 0.2
PKP1-205ENST00000477817 EDC4Q6P2E9 1401 aaKnown RBP16.28■□□□□ 0.2
PKP1-205ENST00000477817 CICQ96RK0 1608 aaPredicted RBP16.27■□□□□ 0.2
PKP1-205ENST00000477817 CGNL1Q0VF96 1302 aa16.27■□□□□ 0.2
PKP1-205ENST00000477817 PCDH11XQ9BZA7 1347 aa16.27■□□□□ 0.2
PKP1-205ENST00000477817 PCDH11YQ9BZA8 1340 aa16.27■□□□□ 0.2
PKP1-205ENST00000477817 GNPATO15228 680 aa16.27■□□□□ 0.2
PKP1-205ENST00000477817 HSPA1AP0DMV8 641 aaKnown RBP16.27■□□□□ 0.2
PKP1-205ENST00000477817 HSPA1BP0DMV9 641 aaKnown RBP16.27■□□□□ 0.2
PKP1-205ENST00000477817 TGFB2P61812 414 aa16.27■□□□□ 0.2
PKP1-205ENST00000477817 RRAGCQ9HB90 399 aa16.27■□□□□ 0.2
PKP1-205ENST00000477817 SMG6Q86US8 1419 aaKnown RBP16.27■□□□□ 0.19
PKP1-205ENST00000477817 PLEKHG2Q9H7P9 1386 aa16.26■□□□□ 0.19
PKP1-205ENST00000477817 SMC1BQ8NDV3 1235 aa16.26■□□□□ 0.19
PKP1-205ENST00000477817 SLC12A5Q9H2X9 1139 aa16.26■□□□□ 0.19
PKP1-205ENST00000477817 MAP3K19Q56UN5 1328 aa16.25■□□□□ 0.19
PKP1-205ENST00000477817 UBR3Q6ZT12 1888 aa16.25■□□□□ 0.19
PKP1-205ENST00000477817 PXDNLA1KZ92 1463 aa16.24■□□□□ 0.19
PKP1-205ENST00000477817 AMIGO3Q86WK7 504 aa16.24■□□□□ 0.19
PKP1-205ENST00000477817 CCDC87Q9NVE4 849 aa16.24■□□□□ 0.19
PKP1-205ENST00000477817 RNF181Q9P0P0 153 aa16.24■□□□□ 0.19
PKP1-205ENST00000477817 KCPQ6ZWJ8 1503 aa16.24■□□□□ 0.19
PKP1-205ENST00000477817 NBPF6Q5VWK0 638 aa16.23■□□□□ 0.19
PKP1-205ENST00000477817 NBPF4Q96M43 638 aa16.23■□□□□ 0.19
PKP1-205ENST00000477817 DPEP1P16444 411 aa16.22■□□□□ 0.19
PKP1-205ENST00000477817 FBLN1P23142 703 aa16.22■□□□□ 0.19
PKP1-205ENST00000477817 ATP6V1AP38606 617 aa16.22■□□□□ 0.19
PKP1-205ENST00000477817 L3MBTL2Q969R5 705 aa16.22■□□□□ 0.19
PKP1-205ENST00000477817 PARP3Q9Y6F1 533 aa16.22■□□□□ 0.19
PKP1-205ENST00000477817 LOC102724428A0A0B4J2F2 783 aa16.21■□□□□ 0.19
PKP1-205ENST00000477817 SIK1P57059 783 aa16.21■□□□□ 0.19
PKP1-205ENST00000477817 TMF1P82094 1093 aa16.21■□□□□ 0.19
PKP1-205ENST00000477817 NLGN1Q8N2Q7 840 aa16.21■□□□□ 0.19
PKP1-205ENST00000477817 LINC00116Q8NCU8 138 aa16.21■□□□□ 0.19
PKP1-205ENST00000477817 TOGARAM1Q9Y4F4 1720 aa16.21■□□□□ 0.19
PKP1-205ENST00000477817 A0A1W2PP64 1363 aa16.21■□□□□ 0.19
PKP1-205ENST00000477817 CD163L1Q9NR16 1453 aa16.21■□□□□ 0.19
PKP1-205ENST00000477817 ITGB4P16144 1822 aa16.2■□□□□ 0.18
PKP1-205ENST00000477817 TRAPPC3LQ5T215 181 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms