RNA–Protein interactions for RNA: ENST00000477546.5

TRAIP-206, Transcript of TRAF interacting protein, humanhuman

TSL 2

Gene TRAIP, Length 1,175 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-206ENST00000477546 NSD2O96028 1365 aa15.17■□□□□ 0.02
TRAIP-206ENST00000477546 SOX12O15370 315 aa15.17■□□□□ 0.02
TRAIP-206ENST00000477546 SYTL4Q96C24 671 aaPredicted RBP15.17■□□□□ 0.02
TRAIP-206ENST00000477546 NFAT5O94916 1531 aa15.17■□□□□ 0.02
TRAIP-206ENST00000477546 PRIM1P49642 420 aaKnown RBP15.16■□□□□ 0.02
TRAIP-206ENST00000477546 STAC3Q96MF2 364 aa15.16■□□□□ 0.02
TRAIP-206ENST00000477546 KDM2AQ9Y2K7 1162 aa15.16■□□□□ 0.02
TRAIP-206ENST00000477546 C10orf71Q711Q0 1435 aa15.16■□□□□ 0.02
TRAIP-206ENST00000477546 PLEKHG2Q9H7P9 1386 aa15.14■□□□□ 0.01
TRAIP-206ENST00000477546 DDX54Q8TDD1 881 aaKnown RBP15.14■□□□□ 0.01
TRAIP-206ENST00000477546 DCAF11Q8TEB1 546 aa15.14■□□□□ 0.01
TRAIP-206ENST00000477546 CABP1Q9NZU7 370 aa15.14■□□□□ 0.01
TRAIP-206ENST00000477546 QRICH2Q9H0J4 1663 aa15.13■□□□□ 0.01
TRAIP-206ENST00000477546 HMGB2P26583 209 aaKnown RBP15.13■□□□□ 0.01
TRAIP-206ENST00000477546 FAM161AQ3B820 660 aa15.13■□□□□ 0.01
TRAIP-206ENST00000477546 SMC1BQ8NDV3 1235 aa15.13■□□□□ 0.01
TRAIP-206ENST00000477546 CABP2Q9NPB3 220 aa15.13■□□□□ 0.01
TRAIP-206ENST00000477546 RAB3GAP2Q9H2M9 1393 aa15.12■□□□□ 0.01
TRAIP-206ENST00000477546 KDM2BQ8NHM5 1336 aa15.12■□□□□ 0.01
TRAIP-206ENST00000477546 USP47Q96K76 1375 aa15.11■□□□□ 0.01
TRAIP-206ENST00000477546 TTC21BQ7Z4L5 1316 aa15.11■□□□□ 0.01
TRAIP-206ENST00000477546 BCS1LQ9Y276 419 aa15.1■□□□□ 0.01
TRAIP-206ENST00000477546 TTC21AQ8NDW8 1320 aa15.1■□□□□ 0.01
TRAIP-206ENST00000477546 PXDNLA1KZ92 1463 aa15.09■□□□□ 0.01
TRAIP-206ENST00000477546 ARHGAP27Q6ZUM4 889 aa15.09■□□□□ 0.01
TRAIP-206ENST00000477546 DOT1LQ8TEK3 1739 aa15.09■□□□□ 0.01
TRAIP-206ENST00000477546 KCPQ6ZWJ8 1503 aa15.08■□□□□ 0.01
TRAIP-206ENST00000477546 C9orf131Q5VYM1 1079 aa15.08■□□□□ 0
TRAIP-206ENST00000477546 ANKRD24Q8TF21 1146 aa15.08■□□□□ 0
TRAIP-206ENST00000477546 USP54Q70EL1 1684 aa15.08■□□□□ 0
TRAIP-206ENST00000477546 C5P01031 1676 aa15.07■□□□□ 0
TRAIP-206ENST00000477546 PRDM10Q9NQV6 1147 aa15.07■□□□□ 0
TRAIP-206ENST00000477546 TGFB2P61812 414 aa15.06■□□□□ 0
TRAIP-206ENST00000477546 ZNF692Q9BU19 519 aaPredicted RBP15.06■□□□□ 0
TRAIP-206ENST00000477546 RRAGCQ9HB90 399 aa15.06■□□□□ 0
TRAIP-206ENST00000477546 NSD3Q9BZ95 1437 aa15.06■□□□□ 0
TRAIP-206ENST00000477546 TNRC6CQ9HCJ0 1690 aaKnown RBP15.04■□□□□ -0
TRAIP-206ENST00000477546 CENPJQ9HC77 1338 aaPredicted RBP15.04■□□□□ -0
TRAIP-206ENST00000477546 AMIGO3Q86WK7 504 aa15.04■□□□□ -0
TRAIP-206ENST00000477546 AK7Q96M32 723 aa15.04■□□□□ -0
TRAIP-206ENST00000477546 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.03■□□□□ -0
TRAIP-206ENST00000477546 FOXN1O15353 648 aa15.02■□□□□ -0
TRAIP-206ENST00000477546 FCHSD2O94868 740 aa15.02■□□□□ -0
TRAIP-206ENST00000477546 PHF14O94880 888 aa15.02■□□□□ -0
TRAIP-206ENST00000477546 TOGARAM1Q9Y4F4 1720 aa15.02□□□□□ -0.01
TRAIP-206ENST00000477546 PALLDQ8WX93 1383 aa15.01□□□□□ -0.01
TRAIP-206ENST00000477546 C4BP0C0L5 1744 aa15.01□□□□□ -0.01
TRAIP-206ENST00000477546 KIAA1551Q9HCM1 1747 aa15.01□□□□□ -0.01
TRAIP-206ENST00000477546 A0A0G2JLW4 131 aa15.01□□□□□ -0.01
TRAIP-206ENST00000477546 SSFA2P28290 1259 aa15.01□□□□□ -0.01
TRAIP-206ENST00000477546 MLLT1Q03111 559 aaPredicted RBP15.01□□□□□ -0.01
TRAIP-206ENST00000477546 PKD1L3Q7Z443 1732 aa15□□□□□ -0.01
TRAIP-206ENST00000477546 USP31Q70CQ4 1352 aa15□□□□□ -0.01
TRAIP-206ENST00000477546 MMP10P09238 476 aa15□□□□□ -0.01
TRAIP-206ENST00000477546 ZCRB1Q8TBF4 217 aaKnown RBP15□□□□□ -0.01
TRAIP-206ENST00000477546 RNF181Q9P0P0 153 aa15□□□□□ -0.01
TRAIP-206ENST00000477546 KIF13BQ9NQT8 1826 aa14.99□□□□□ -0.01
TRAIP-206ENST00000477546 SMIM5Q71RC9 77 aa14.99□□□□□ -0.01
TRAIP-206ENST00000477546 ABHD8Q96I13 439 aa14.99□□□□□ -0.01
TRAIP-206ENST00000477546 TAF1LQ8IZX4 1826 aa14.99□□□□□ -0.01
TRAIP-206ENST00000477546 CTCFP49711 727 aaPredicted RBP14.98□□□□□ -0.01
TRAIP-206ENST00000477546 UBR3Q6ZT12 1888 aa14.97□□□□□ -0.01
TRAIP-206ENST00000477546 DPEP1P16444 411 aa14.97□□□□□ -0.01
TRAIP-206ENST00000477546 N4BP2Q86UW6 1770 aaPredicted RBP14.97□□□□□ -0.01
TRAIP-206ENST00000477546 KTN1Q86UP2 1357 aaKnown RBP14.97□□□□□ -0.01
TRAIP-206ENST00000477546 ZC3H4Q9UPT8 1303 aaKnown RBP14.96□□□□□ -0.01
TRAIP-206ENST00000477546 LTN1O94822 1766 aa14.96□□□□□ -0.01
TRAIP-206ENST00000477546 VEGFAP15692 232 aaPredicted RBP14.96□□□□□ -0.01
TRAIP-206ENST00000477546 RGS19P49795 217 aa14.96□□□□□ -0.01
TRAIP-206ENST00000477546 KIAA1210Q9ULL0 1709 aa14.96□□□□□ -0.01
TRAIP-206ENST00000477546 FAM208AQ9UK61 1670 aaKnown RBP14.96□□□□□ -0.01
TRAIP-206ENST00000477546 EVC2Q86UK5 1308 aa14.95□□□□□ -0.02
TRAIP-206ENST00000477546 NBPF1Q3BBV0 1214 aa14.95□□□□□ -0.02
TRAIP-206ENST00000477546 AIDAQ96BJ3 306 aa14.95□□□□□ -0.02
TRAIP-206ENST00000477546 DCAF5Q96JK2 942 aa14.95□□□□□ -0.02
TRAIP-206ENST00000477546 CREBZFQ9NS37 354 aa14.95□□□□□ -0.02
TRAIP-206ENST00000477546 MEGF6O75095 1541 aa14.95□□□□□ -0.02
TRAIP-206ENST00000477546 IP6K1Q92551 441 aa14.94□□□□□ -0.02
TRAIP-206ENST00000477546 SMARCC1Q92922 1105 aaPredicted RBP14.94□□□□□ -0.02
TRAIP-206ENST00000477546 MKRN1Q9UHC7 482 aaKnown RBP14.94□□□□□ -0.02
TRAIP-206ENST00000477546 KCNA3P22001 575 aa14.93□□□□□ -0.02
TRAIP-206ENST00000477546 CCDC87Q9NVE4 849 aa14.93□□□□□ -0.02
TRAIP-206ENST00000477546 BRCA1P38398 1863 aaKnown RBP14.93□□□□□ -0.02
TRAIP-206ENST00000477546 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.92□□□□□ -0.02
TRAIP-206ENST00000477546 LTV1Q96GA3 475 aaPredicted RBP14.92□□□□□ -0.02
TRAIP-206ENST00000477546 ARFGEF1Q9Y6D6 1849 aa14.92□□□□□ -0.02
TRAIP-206ENST00000477546 CNTNAP1P78357 1384 aa14.91□□□□□ -0.02
TRAIP-206ENST00000477546 GLTPD2A6NH11 291 aa14.91□□□□□ -0.02
TRAIP-206ENST00000477546 LBX1P52954 281 aa14.91□□□□□ -0.02
TRAIP-206ENST00000477546 MPRIPQ6WCQ1 1025 aa14.91□□□□□ -0.02
TRAIP-206ENST00000477546 NME9Q86XW9 330 aa14.91□□□□□ -0.02
TRAIP-206ENST00000477546 PIM2Q9P1W9 311 aa14.91□□□□□ -0.02
TRAIP-206ENST00000477546 CGNL1Q0VF96 1302 aa14.91□□□□□ -0.02
TRAIP-206ENST00000477546 GNPATO15228 680 aa14.9□□□□□ -0.02
TRAIP-206ENST00000477546 DALRD3Q5D0E6 543 aaKnown RBP14.9□□□□□ -0.02
TRAIP-206ENST00000477546 NLGN1Q8N2Q7 840 aa14.9□□□□□ -0.02
TRAIP-206ENST00000477546 LINC00116Q8NCU8 138 aa14.9□□□□□ -0.02
TRAIP-206ENST00000477546 SBNO2Q9Y2G9 1366 aa14.88□□□□□ -0.03
TRAIP-206ENST00000477546 TMF1P82094 1093 aa14.88□□□□□ -0.03
TRAIP-206ENST00000477546 WBP1LQ9NX94 342 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms