RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 ADGRL3Q9HAR2 1447 aa8.75□□□□□ -1.01
LDB3-206ENST00000477489 EMP3P54852 163 aa8.75□□□□□ -1.01
LDB3-206ENST00000477489 TRMT2AQ8IZ69 625 aaKnown RBP8.75□□□□□ -1.01
LDB3-206ENST00000477489 HS6ST3Q8IZP7 471 aa8.75□□□□□ -1.01
LDB3-206ENST00000477489 COG3Q96JB2 828 aa8.75□□□□□ -1.01
LDB3-206ENST00000477489 PPP4R2Q9NY27 417 aa8.75□□□□□ -1.01
LDB3-206ENST00000477489 RCAN3Q9UKA8 241 aa8.75□□□□□ -1.01
LDB3-206ENST00000477489 DIAPH1O60610 1272 aaKnown RBP8.74□□□□□ -1.01
LDB3-206ENST00000477489 KCNA6P17658 529 aa8.74□□□□□ -1.01
LDB3-206ENST00000477489 SLFN5Q08AF3 891 aa8.74□□□□□ -1.01
LDB3-206ENST00000477489 DOK7Q18PE1 504 aa8.74□□□□□ -1.01
LDB3-206ENST00000477489 WDR63Q8IWG1 891 aa8.74□□□□□ -1.01
LDB3-206ENST00000477489 GGNBP2Q9H3C7 697 aa8.74□□□□□ -1.01
LDB3-206ENST00000477489 TTC21BQ7Z4L5 1316 aa8.74□□□□□ -1.01
LDB3-206ENST00000477489 FCHSD2O94868 740 aa8.73□□□□□ -1.01
LDB3-206ENST00000477489 ACEP12821 1306 aa8.73□□□□□ -1.01
LDB3-206ENST00000477489 IL16Q14005 1332 aa8.73□□□□□ -1.01
LDB3-206ENST00000477489 DCCP43146 1447 aa8.72□□□□□ -1.01
LDB3-206ENST00000477489 KIF1AQ12756 1690 aa8.72□□□□□ -1.01
LDB3-206ENST00000477489 APAF1O14727 1248 aa8.72□□□□□ -1.01
LDB3-206ENST00000477489 CT47B1P0C2W7 299 aaPredicted RBP8.72□□□□□ -1.01
LDB3-206ENST00000477489 DUSP27Q5VZP5 1158 aa8.72□□□□□ -1.01
LDB3-206ENST00000477489 ZNF710Q8N1W2 664 aa8.72□□□□□ -1.01
LDB3-206ENST00000477489 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.72□□□□□ -1.01
LDB3-206ENST00000477489 POLKQ9UBT6 870 aa8.72□□□□□ -1.01
LDB3-206ENST00000477489 RGPD8O14715 1765 aaPredicted RBP8.71□□□□□ -1.01
LDB3-206ENST00000477489 NEFMP07197 916 aa8.71□□□□□ -1.02
LDB3-206ENST00000477489 U2AF1L5P0DN76 240 aaPredicted RBP8.71□□□□□ -1.02
LDB3-206ENST00000477489 RRP1P56182 461 aaKnown RBP8.71□□□□□ -1.02
LDB3-206ENST00000477489 U2AF1Q01081 240 aaKnown RBP eCLIP8.71□□□□□ -1.02
LDB3-206ENST00000477489 WWC1Q8IX03 1113 aa8.71□□□□□ -1.02
LDB3-206ENST00000477489 MAPK8IP3Q9UPT6 1336 aa8.71□□□□□ -1.02
LDB3-206ENST00000477489 HOXB1P14653 301 aaPredicted RBP8.7□□□□□ -1.02
LDB3-206ENST00000477489 TNNT2P45379 298 aaPredicted RBP8.7□□□□□ -1.02
LDB3-206ENST00000477489 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.7□□□□□ -1.02
LDB3-206ENST00000477489 TCP11L2Q8N4U5 519 aa8.7□□□□□ -1.02
LDB3-206ENST00000477489 PLEKHF1Q96S99 279 aa8.7□□□□□ -1.02
LDB3-206ENST00000477489 XIRP1Q702N8 1843 aaKnown RBP8.7□□□□□ -1.02
LDB3-206ENST00000477489 PHRF1Q9P1Y6 1649 aaKnown RBP8.69□□□□□ -1.02
LDB3-206ENST00000477489 PIK3C2AO00443 1686 aa8.69□□□□□ -1.02
LDB3-206ENST00000477489 RIMBP2O15034 1052 aa8.69□□□□□ -1.02
LDB3-206ENST00000477489 CALD1Q05682 793 aaKnown RBP8.69□□□□□ -1.02
LDB3-206ENST00000477489 NME9Q86XW9 330 aa8.69□□□□□ -1.02
LDB3-206ENST00000477489 MYH16Q9H6N6 1097 aa8.69□□□□□ -1.02
LDB3-206ENST00000477489 MST1RQ04912 1400 aa8.69□□□□□ -1.02
LDB3-206ENST00000477489 RGPD1P0DJD0 1748 aa8.68□□□□□ -1.02
LDB3-206ENST00000477489 FAM205CA6NFA0 338 aa8.68□□□□□ -1.02
LDB3-206ENST00000477489 LMOD3Q0VAK6 560 aa8.68□□□□□ -1.02
LDB3-206ENST00000477489 AAMPQ13685 434 aa8.68□□□□□ -1.02
LDB3-206ENST00000477489 CCDC146Q8IYE0 955 aa8.68□□□□□ -1.02
LDB3-206ENST00000477489 NGDNQ8NEJ9 315 aaKnown RBP8.68□□□□□ -1.02
LDB3-206ENST00000477489 CDCA7LQ96GN5 454 aa8.68□□□□□ -1.02
LDB3-206ENST00000477489 HS3ST6Q96QI5 342 aa8.68□□□□□ -1.02
LDB3-206ENST00000477489 SBNO1A3KN83 1393 aa8.68□□□□□ -1.02
LDB3-206ENST00000477489 RTL1A6NKG5 1358 aa8.68□□□□□ -1.02
LDB3-206ENST00000477489 POTEB3A0JP26 581 aa8.67□□□□□ -1.02
LDB3-206ENST00000477489 PPP1R37O75864 691 aa8.67□□□□□ -1.02
LDB3-206ENST00000477489 IL13P35225 146 aa8.67□□□□□ -1.02
LDB3-206ENST00000477489 FLT4P35916 1363 aa8.67□□□□□ -1.02
LDB3-206ENST00000477489 POTEBQ6S5H4 581 aa8.67□□□□□ -1.02
LDB3-206ENST00000477489 ZNF428Q96B54 188 aa8.67□□□□□ -1.02
LDB3-206ENST00000477489 ZSWIM6Q9HCJ5 1215 aa8.67□□□□□ -1.02
LDB3-206ENST00000477489 MARF1Q9Y4F3 1742 aaKnown RBP8.67□□□□□ -1.02
LDB3-206ENST00000477489 ARHGEF10O15013 1369 aa8.66□□□□□ -1.02
LDB3-206ENST00000477489 KIF3CO14782 793 aa8.66□□□□□ -1.02
LDB3-206ENST00000477489 U2SURPO15042 1029 aaKnown RBP8.66□□□□□ -1.02
LDB3-206ENST00000477489 TMPOP42166 694 aaKnown RBP8.66□□□□□ -1.02
LDB3-206ENST00000477489 RSPH6AQ9H0K4 717 aa8.66□□□□□ -1.02
LDB3-206ENST00000477489 SALL2Q9Y467 1007 aaPredicted RBP8.66□□□□□ -1.02
LDB3-206ENST00000477489 ROBO1Q9Y6N7 1651 aa8.65□□□□□ -1.02
LDB3-206ENST00000477489 C2orf72A6NCS6 295 aa8.65□□□□□ -1.02
LDB3-206ENST00000477489 C19orf44Q9H6X5 657 aa8.65□□□□□ -1.02
LDB3-206ENST00000477489 KDRP35968 1356 aa8.64□□□□□ -1.03
LDB3-206ENST00000477489 PEAK1Q9H792 1746 aa8.64□□□□□ -1.03
LDB3-206ENST00000477489 MS4A1P11836 297 aa8.64□□□□□ -1.03
LDB3-206ENST00000477489 PDE3AQ14432 1141 aa8.64□□□□□ -1.03
LDB3-206ENST00000477489 KCNH5Q8NCM2 988 aa8.64□□□□□ -1.03
LDB3-206ENST00000477489 EMILIN1Q9Y6C2 1016 aa8.64□□□□□ -1.03
LDB3-206ENST00000477489 ABCC6O95255 1503 aa8.64□□□□□ -1.03
LDB3-206ENST00000477489 PLEKHG2Q9H7P9 1386 aa8.63□□□□□ -1.03
LDB3-206ENST00000477489 HAP1P54257 671 aaPredicted RBP8.63□□□□□ -1.03
LDB3-206ENST00000477489 NFE2L2Q16236 605 aa8.63□□□□□ -1.03
LDB3-206ENST00000477489 GPR153Q6NV75 609 aa8.63□□□□□ -1.03
LDB3-206ENST00000477489 SLIT3O75094 1523 aa8.63□□□□□ -1.03
LDB3-206ENST00000477489 SRCAPQ6ZRS2 3230 aa8.63□□□□□ -1.03
LDB3-206ENST00000477489 TRPM3Q9HCF6 1732 aaPredicted RBP8.63□□□□□ -1.03
LDB3-206ENST00000477489 PRKAR2BP31323 418 aa8.62□□□□□ -1.03
LDB3-206ENST00000477489 RIPK4P57078 832 aa8.62□□□□□ -1.03
LDB3-206ENST00000477489 PROSER2Q86WR7 435 aaPredicted RBP8.62□□□□□ -1.03
LDB3-206ENST00000477489 PMFBP1Q8TBY8 1022 aa8.62□□□□□ -1.03
LDB3-206ENST00000477489 CCDC136Q96JN2 1154 aa8.62□□□□□ -1.03
LDB3-206ENST00000477489 PHLPP1O60346 1717 aa8.62□□□□□ -1.03
LDB3-206ENST00000477489 C1orf167Q5SNV9 1468 aa8.62□□□□□ -1.03
LDB3-206ENST00000477489 DLG5Q8TDM6 1919 aa8.62□□□□□ -1.03
LDB3-206ENST00000477489 LTN1O94822 1766 aa8.61□□□□□ -1.03
LDB3-206ENST00000477489 ERBB3P21860 1342 aa8.61□□□□□ -1.03
LDB3-206ENST00000477489 MAP3K19Q56UN5 1328 aa8.61□□□□□ -1.03
LDB3-206ENST00000477489 NFAT5O94916 1531 aa8.61□□□□□ -1.03
LDB3-206ENST00000477489 PPM1GO15355 546 aaPredicted RBP8.61□□□□□ -1.03
LDB3-206ENST00000477489 BRPF1P55201 1214 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms