RNA–Protein interactions for RNA: ENST00000477132.1

PRKD3-209, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-209ENST00000477132 USHBP1Q8N6Y0 703 aa16.86■□□□□ 0.29
PRKD3-209ENST00000477132 POLKQ9UBT6 870 aa16.86■□□□□ 0.29
PRKD3-209ENST00000477132 NUP188Q5SRE5 1749 aa16.86■□□□□ 0.29
PRKD3-209ENST00000477132 PPM1GO15355 546 aaPredicted RBP16.85■□□□□ 0.29
PRKD3-209ENST00000477132 RGPD3A6NKT7 1758 aaPredicted RBP16.84■□□□□ 0.29
PRKD3-209ENST00000477132 RGPD4Q7Z3J3 1758 aa16.84■□□□□ 0.29
PRKD3-209ENST00000477132 PER1O15534 1290 aaPredicted RBP16.84■□□□□ 0.29
PRKD3-209ENST00000477132 KNSTRNQ9Y448 316 aa16.84■□□□□ 0.29
PRKD3-209ENST00000477132 NCAPD2Q15021 1401 aa16.84■□□□□ 0.29
PRKD3-209ENST00000477132 EZH2Q15910 746 aaKnown RBP16.83■□□□□ 0.28
PRKD3-209ENST00000477132 DOT1LQ8TEK3 1739 aa16.83■□□□□ 0.28
PRKD3-209ENST00000477132 PKD1L3Q7Z443 1732 aa16.82■□□□□ 0.28
PRKD3-209ENST00000477132 APBA3O96018 575 aa16.82■□□□□ 0.28
PRKD3-209ENST00000477132 CAMKK2Q96RR4 588 aa16.82■□□□□ 0.28
PRKD3-209ENST00000477132 BTAF1O14981 1849 aa16.81■□□□□ 0.28
PRKD3-209ENST00000477132 MORC1Q86VD1 984 aa16.8■□□□□ 0.28
PRKD3-209ENST00000477132 KAT6BQ8WYB5 2073 aa16.78■□□□□ 0.28
PRKD3-209ENST00000477132 KCNQ2O43526 872 aa16.78■□□□□ 0.28
PRKD3-209ENST00000477132 EIF4A2Q14240 407 aaKnown RBP16.78■□□□□ 0.28
PRKD3-209ENST00000477132 BCL11BQ9C0K0 894 aaPredicted RBP16.78■□□□□ 0.28
PRKD3-209ENST00000477132 PARD3Q8TEW0 1356 aa16.77■□□□□ 0.28
PRKD3-209ENST00000477132 CC2D1BQ5T0F9 858 aaKnown RBP16.77■□□□□ 0.28
PRKD3-209ENST00000477132 DDX54Q8TDD1 881 aaKnown RBP16.77■□□□□ 0.28
PRKD3-209ENST00000477132 ACSBG1Q96GR2 724 aa16.77■□□□□ 0.28
PRKD3-209ENST00000477132 EYA1Q99502 592 aa16.77■□□□□ 0.28
PRKD3-209ENST00000477132 TOGARAM1Q9Y4F4 1720 aa16.76■□□□□ 0.27
PRKD3-209ENST00000477132 ZCRB1Q8TBF4 217 aaKnown RBP16.75■□□□□ 0.27
PRKD3-209ENST00000477132 RAPGEF4Q8WZA2 1011 aa16.75■□□□□ 0.27
PRKD3-209ENST00000477132 NPC1L1Q9UHC9 1359 aa16.75■□□□□ 0.27
PRKD3-209ENST00000477132 TATP17735 454 aaPredicted RBP16.74■□□□□ 0.27
PRKD3-209ENST00000477132 IGSF1Q8N6C5 1336 aa16.73■□□□□ 0.27
PRKD3-209ENST00000477132 PSDA5PKW4 1024 aaPredicted RBP16.73■□□□□ 0.27
PRKD3-209ENST00000477132 PLSCR1O15162 318 aa16.73■□□□□ 0.27
PRKD3-209ENST00000477132 CNGB1Q14028 1251 aaPredicted RBP16.73■□□□□ 0.27
PRKD3-209ENST00000477132 ITGB4P16144 1822 aa16.73■□□□□ 0.27
PRKD3-209ENST00000477132 PROM2Q8N271 834 aa16.71■□□□□ 0.27
PRKD3-209ENST00000477132 PAPPAQ13219 1627 aa16.7■□□□□ 0.26
PRKD3-209ENST00000477132 LY75O60449 1722 aa16.7■□□□□ 0.26
PRKD3-209ENST00000477132 COL3A1P02461 1466 aaPredicted RBP16.7■□□□□ 0.26
PRKD3-209ENST00000477132 CYP27B1O15528 508 aa16.7■□□□□ 0.26
PRKD3-209ENST00000477132 MTHFSP49914 203 aa16.7■□□□□ 0.26
PRKD3-209ENST00000477132 PCDH11XQ9BZA7 1347 aa16.7■□□□□ 0.26
PRKD3-209ENST00000477132 PCDH11YQ9BZA8 1340 aa16.7■□□□□ 0.26
PRKD3-209ENST00000477132 IL13P35225 146 aa16.69■□□□□ 0.26
PRKD3-209ENST00000477132 R3HDM1Q15032 1099 aaKnown RBP16.69■□□□□ 0.26
PRKD3-209ENST00000477132 AEBP1Q8IUX7 1158 aa16.68■□□□□ 0.26
PRKD3-209ENST00000477132 PRIM1P49642 420 aaKnown RBP16.67■□□□□ 0.26
PRKD3-209ENST00000477132 TXNRD1Q16881 649 aa16.67■□□□□ 0.26
PRKD3-209ENST00000477132 ANO8Q9HCE9 1232 aaPredicted RBP16.67■□□□□ 0.26
PRKD3-209ENST00000477132 LRP5O75197 1615 aa16.67■□□□□ 0.26
PRKD3-209ENST00000477132 SYTL4Q96C24 671 aaPredicted RBP16.66■□□□□ 0.26
PRKD3-209ENST00000477132 CASZ1Q86V15 1759 aa16.66■□□□□ 0.26
PRKD3-209ENST00000477132 KDRP35968 1356 aa16.65■□□□□ 0.26
PRKD3-209ENST00000477132 KCNA4P22459 653 aa16.64■□□□□ 0.25
PRKD3-209ENST00000477132 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.64■□□□□ 0.257e-7■■■□□ 14.8
PRKD3-209ENST00000477132 SPG7Q9UQ90 795 aa16.64■□□□□ 0.25
PRKD3-209ENST00000477132 PLEKHG2Q9H7P9 1386 aa16.64■□□□□ 0.25
PRKD3-209ENST00000477132 VIRMAQ69YN4 1812 aaKnown RBP16.63■□□□□ 0.25
PRKD3-209ENST00000477132 TUBGCP6Q96RT7 1819 aa16.63■□□□□ 0.25
PRKD3-209ENST00000477132 SULT6B1Q6IMI4 303 aa16.63■□□□□ 0.25
PRKD3-209ENST00000477132 PHKG2P15735 406 aa16.62■□□□□ 0.25
PRKD3-209ENST00000477132 NKX1-1Q15270 411 aaPredicted RBP16.62■□□□□ 0.25
PRKD3-209ENST00000477132 LRRC4BQ9NT99 713 aa16.62■□□□□ 0.25
PRKD3-209ENST00000477132 NBPF14Q5TI25 921 aa16.61■□□□□ 0.25
PRKD3-209ENST00000477132 TAF1LQ8IZX4 1826 aa16.61■□□□□ 0.25
PRKD3-209ENST00000477132 DIAPH1O60610 1272 aaKnown RBP16.6■□□□□ 0.25
PRKD3-209ENST00000477132 KCNQ4P56696 695 aa16.6■□□□□ 0.25
PRKD3-209ENST00000477132 KDM6AO15550 1401 aaPredicted RBP16.6■□□□□ 0.25
PRKD3-209ENST00000477132 C5P01031 1676 aa16.59■□□□□ 0.25
PRKD3-209ENST00000477132 SCN11AQ9UI33 1791 aa16.59■□□□□ 0.25
PRKD3-209ENST00000477132 SRCAPQ6ZRS2 3230 aa16.59■□□□□ 0.25
PRKD3-209ENST00000477132 HMOX1P09601 288 aa16.59■□□□□ 0.25
PRKD3-209ENST00000477132 PPP2R1AP30153 589 aa16.59■□□□□ 0.25
PRKD3-209ENST00000477132 IFNL2Q8IZJ0 200 aa16.59■□□□□ 0.25
PRKD3-209ENST00000477132 PDGFDQ9GZP0 370 aaPredicted RBP16.59■□□□□ 0.25
PRKD3-209ENST00000477132 QSER1Q2KHR3 1735 aa16.59■□□□□ 0.25
PRKD3-209ENST00000477132 MPRIPQ6WCQ1 1025 aa16.58■□□□□ 0.24
PRKD3-209ENST00000477132 U3KPZ7 1027 aaPredicted RBP16.58■□□□□ 0.24
PRKD3-209ENST00000477132 ZNF827Q17R98 1081 aa16.57■□□□□ 0.24
PRKD3-209ENST00000477132 PLEKHO1Q53GL0 409 aaPredicted RBP16.57■□□□□ 0.24
PRKD3-209ENST00000477132 ZNF530Q6P9A1 599 aaPredicted RBP16.57■□□□□ 0.24
PRKD3-209ENST00000477132 PALLDQ8WX93 1383 aa16.56■□□□□ 0.24
PRKD3-209ENST00000477132 SLC15A2Q16348 729 aa16.56■□□□□ 0.24
PRKD3-209ENST00000477132 PIGBQ92521 554 aa16.56■□□□□ 0.24
PRKD3-209ENST00000477132 DDX10Q13206 875 aaKnown RBP16.55■□□□□ 0.24
PRKD3-209ENST00000477132 AMOTQ4VCS5 1084 aa16.55■□□□□ 0.24
PRKD3-209ENST00000477132 SLC27A3Q5K4L6 730 aa16.55■□□□□ 0.24
PRKD3-209ENST00000477132 STK32BQ9NY57 414 aa16.55■□□□□ 0.24
PRKD3-209ENST00000477132 ADAMTS7Q9UKP4 1686 aa16.55■□□□□ 0.24
PRKD3-209ENST00000477132 U2SURPO15042 1029 aaKnown RBP16.53■□□□□ 0.24
PRKD3-209ENST00000477132 ZEB1P37275 1124 aaPredicted RBP16.53■□□□□ 0.24
PRKD3-209ENST00000477132 AKT1S1Q96B36 256 aa16.53■□□□□ 0.24
PRKD3-209ENST00000477132 CCNL1Q9UK58 526 aaPredicted RBP16.53■□□□□ 0.24
PRKD3-209ENST00000477132 DCAF5Q96JK2 942 aa16.52■□□□□ 0.24
PRKD3-209ENST00000477132 TMOD3Q9NYL9 352 aa16.52■□□□□ 0.24
PRKD3-209ENST00000477132 C4BP0C0L5 1744 aa16.52■□□□□ 0.24
PRKD3-209ENST00000477132 MTHFSDQ2M296 383 aaKnown RBP16.51■□□□□ 0.23
PRKD3-209ENST00000477132 CFAP53Q96M91 514 aa16.51■□□□□ 0.23
PRKD3-209ENST00000477132 ASAP1Q9ULH1 1129 aa16.51■□□□□ 0.23
PRKD3-209ENST00000477132 MRC1P22897 1456 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms