RNA–Protein interactions for RNA: ENST00000476978.1

TCEA3-205, Transcript of transcription elongation factor A3, humanhuman

TSL 3

Gene TCEA3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-205ENST00000476978 SHANK3Q9BYB0 1731 aa9.97□□□□□ -0.81
TCEA3-205ENST00000476978 NBPF6Q5VWK0 638 aa9.97□□□□□ -0.81
TCEA3-205ENST00000476978 ZCRB1Q8TBF4 217 aaKnown RBP9.97□□□□□ -0.81
TCEA3-205ENST00000476978 NBPF4Q96M43 638 aa9.97□□□□□ -0.81
TCEA3-205ENST00000476978 RTL1A6NKG5 1358 aa9.97□□□□□ -0.81
TCEA3-205ENST00000476978 KAT6BQ8WYB5 2073 aa9.97□□□□□ -0.81
TCEA3-205ENST00000476978 NHSQ6T4R5 1651 aa9.96□□□□□ -0.81
TCEA3-205ENST00000476978 FAM208AQ9UK61 1670 aaKnown RBP9.96□□□□□ -0.81
TCEA3-205ENST00000476978 GPR162Q16538 588 aa9.96□□□□□ -0.82
TCEA3-205ENST00000476978 HSP90AB2PQ58FF8 381 aa9.96□□□□□ -0.82
TCEA3-205ENST00000476978 CEP350Q5VT06 3117 aa9.96□□□□□ -0.82
TCEA3-205ENST00000476978 PAPPAQ13219 1627 aa9.96□□□□□ -0.82
TCEA3-205ENST00000476978 PRIM1P49642 420 aaKnown RBP9.95□□□□□ -0.82
TCEA3-205ENST00000476978 SYTL4Q96C24 671 aaPredicted RBP9.95□□□□□ -0.82
TCEA3-205ENST00000476978 CGNL1Q0VF96 1302 aa9.95□□□□□ -0.82
TCEA3-205ENST00000476978 SMG6Q86US8 1419 aaKnown RBP9.94□□□□□ -0.82
TCEA3-205ENST00000476978 NSD3Q9BZ95 1437 aa9.94□□□□□ -0.82
TCEA3-205ENST00000476978 INSRP06213 1382 aa9.94□□□□□ -0.82
TCEA3-205ENST00000476978 KIF24Q5T7B8 1368 aa9.94□□□□□ -0.82
TCEA3-205ENST00000476978 SLC27A3Q5K4L6 730 aa9.94□□□□□ -0.82
TCEA3-205ENST00000476978 USHBP1Q8N6Y0 703 aa9.94□□□□□ -0.82
TCEA3-205ENST00000476978 CCER1Q8TC90 406 aaPredicted RBP9.94□□□□□ -0.82
TCEA3-205ENST00000476978 RAPGEF4Q8WZA2 1011 aa9.94□□□□□ -0.82
TCEA3-205ENST00000476978 LRRC4BQ9NT99 713 aa9.94□□□□□ -0.82
TCEA3-205ENST00000476978 BTAF1O14981 1849 aa9.93□□□□□ -0.82
TCEA3-205ENST00000476978 RGPD2P0DJD1 1756 aa9.93□□□□□ -0.82
TCEA3-205ENST00000476978 COL24A1Q17RW2 1714 aa9.93□□□□□ -0.82
TCEA3-205ENST00000476978 MEGF6O75095 1541 aa9.93□□□□□ -0.82
TCEA3-205ENST00000476978 FLT4P35916 1363 aa9.93□□□□□ -0.82
TCEA3-205ENST00000476978 TATP17735 454 aaPredicted RBP9.93□□□□□ -0.82
TCEA3-205ENST00000476978 EIF4G2P78344 907 aaKnown RBP eCLIP9.93□□□□□ -0.82
TCEA3-205ENST00000476978 POLR3GLQ9BT43 218 aa9.93□□□□□ -0.82
TCEA3-205ENST00000476978 KIF20BQ96Q89 1820 aa9.92□□□□□ -0.82
TCEA3-205ENST00000476978 PPM1GO15355 546 aaPredicted RBP9.92□□□□□ -0.82
TCEA3-205ENST00000476978 ZNF827Q17R98 1081 aa9.92□□□□□ -0.82
TCEA3-205ENST00000476978 EMILIN1Q9Y6C2 1016 aa9.92□□□□□ -0.82
TCEA3-205ENST00000476978 QSER1Q2KHR3 1735 aa9.91□□□□□ -0.82
TCEA3-205ENST00000476978 HSPA5P11021 654 aaKnown RBP9.91□□□□□ -0.82
TCEA3-205ENST00000476978 AKT1S1Q96B36 256 aa9.91□□□□□ -0.82
TCEA3-205ENST00000476978 WASHC2AQ641Q2 1341 aa9.9□□□□□ -0.82
TCEA3-205ENST00000476978 PCDH11XQ9BZA7 1347 aa9.9□□□□□ -0.82
TCEA3-205ENST00000476978 PCDH11YQ9BZA8 1340 aa9.9□□□□□ -0.82
TCEA3-205ENST00000476978 KCNQ4P56696 695 aa9.9□□□□□ -0.82
TCEA3-205ENST00000476978 PELP1Q8IZL8 1130 aaKnown RBP9.9□□□□□ -0.82
TCEA3-205ENST00000476978 KLHL34Q8N239 644 aa9.9□□□□□ -0.82
TCEA3-205ENST00000476978 POLKQ9UBT6 870 aa9.9□□□□□ -0.82
TCEA3-205ENST00000476978 NSD2O96028 1365 aa9.89□□□□□ -0.83
TCEA3-205ENST00000476978 TFCP2L1Q9NZI6 479 aa9.89□□□□□ -0.83
TCEA3-205ENST00000476978 CYP27B1O15528 508 aa9.88□□□□□ -0.83
TCEA3-205ENST00000476978 POLD1P28340 1107 aa9.88□□□□□ -0.83
TCEA3-205ENST00000476978 TNNT2P45379 298 aaPredicted RBP9.88□□□□□ -0.83
TCEA3-205ENST00000476978 NLGN2Q8NFZ4 835 aa9.88□□□□□ -0.83
TCEA3-205ENST00000476978 SLC16A10Q8TF71 515 aa9.88□□□□□ -0.83
TCEA3-205ENST00000476978 EYA1Q99502 592 aa9.88□□□□□ -0.83
TCEA3-205ENST00000476978 PANK3Q9H999 370 aa9.88□□□□□ -0.83
TCEA3-205ENST00000476978 CCNL1Q9UK58 526 aaPredicted RBP9.88□□□□□ -0.83
TCEA3-205ENST00000476978 DOT1LQ8TEK3 1739 aa9.87□□□□□ -0.83
TCEA3-205ENST00000476978 GOLGB1Q14789 3259 aaKnown RBP9.87□□□□□ -0.83
TCEA3-205ENST00000476978 PNPLA7Q6ZV29 1317 aa9.87□□□□□ -0.83
TCEA3-205ENST00000476978 TUBGCP6Q96RT7 1819 aa9.87□□□□□ -0.83
TCEA3-205ENST00000476978 MPRIPQ6WCQ1 1025 aa9.87□□□□□ -0.83
TCEA3-205ENST00000476978 SPG7Q9UQ90 795 aa9.87□□□□□ -0.83
TCEA3-205ENST00000476978 ATP10DQ9P241 1426 aa9.87□□□□□ -0.83
TCEA3-205ENST00000476978 MAP2P11137 1827 aaKnown RBP9.86□□□□□ -0.83
TCEA3-205ENST00000476978 GRIN3BO60391 1043 aa9.86□□□□□ -0.83
TCEA3-205ENST00000476978 YBX3P16989 372 aaKnown RBP eCLIP9.86□□□□□ -0.83
TCEA3-205ENST00000476978 HSPA6P17066 643 aa9.86□□□□□ -0.83
TCEA3-205ENST00000476978 HMGB2P26583 209 aaKnown RBP9.86□□□□□ -0.83
TCEA3-205ENST00000476978 NKX1-1Q15270 411 aaPredicted RBP9.86□□□□□ -0.83
TCEA3-205ENST00000476978 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.86□□□□□ -0.833e-7■□□□□ 9.3
TCEA3-205ENST00000476978 LY75O60449 1722 aa9.85□□□□□ -0.83
TCEA3-205ENST00000476978 NCAPD2Q15021 1401 aa9.85□□□□□ -0.83
TCEA3-205ENST00000476978 EIF4A2Q14240 407 aaKnown RBP9.85□□□□□ -0.83
TCEA3-205ENST00000476978 ANKRD26Q9UPS8 1709 aa9.85□□□□□ -0.83
TCEA3-205ENST00000476978 MSH5O43196 834 aa9.84□□□□□ -0.83
TCEA3-205ENST00000476978 PIGBQ92521 554 aa9.84□□□□□ -0.83
TCEA3-205ENST00000476978 SMARCC1Q92922 1105 aaPredicted RBP9.84□□□□□ -0.83
TCEA3-205ENST00000476978 GPBP1L1Q9HC44 474 aaPredicted RBP9.84□□□□□ -0.83
TCEA3-205ENST00000476978 PALLDQ8WX93 1383 aa9.84□□□□□ -0.83
TCEA3-205ENST00000476978 MORC1Q86VD1 984 aa9.83□□□□□ -0.84
TCEA3-205ENST00000476978 COL23A1Q86Y22 540 aaPredicted RBP9.83□□□□□ -0.84
TCEA3-205ENST00000476978 IFNL2Q8IZJ0 200 aa9.83□□□□□ -0.84
TCEA3-205ENST00000476978 KNSTRNQ9Y448 316 aa9.83□□□□□ -0.84
TCEA3-205ENST00000476978 PKD1L3Q7Z443 1732 aa9.82□□□□□ -0.84
TCEA3-205ENST00000476978 PHKG2P15735 406 aa9.82□□□□□ -0.84
TCEA3-205ENST00000476978 FLAD1Q8NFF5 587 aa9.82□□□□□ -0.84
TCEA3-205ENST00000476978 TMOD3Q9NYL9 352 aa9.82□□□□□ -0.84
TCEA3-205ENST00000476978 ADCY9O60503 1353 aa9.82□□□□□ -0.84
TCEA3-205ENST00000476978 IGSF1Q8N6C5 1336 aa9.82□□□□□ -0.84
TCEA3-205ENST00000476978 ITGB4P16144 1822 aa9.8□□□□□ -0.84
TCEA3-205ENST00000476978 PLEKHG2Q9H7P9 1386 aa9.8□□□□□ -0.84
TCEA3-205ENST00000476978 LOC102724428A0A0B4J2F2 783 aa9.8□□□□□ -0.84
TCEA3-205ENST00000476978 SIK1P57059 783 aa9.8□□□□□ -0.84
TCEA3-205ENST00000476978 PLEKHO1Q53GL0 409 aaPredicted RBP9.8□□□□□ -0.84
TCEA3-205ENST00000476978 ZNF526Q8TF50 670 aaPredicted RBP9.8□□□□□ -0.84
TCEA3-205ENST00000476978 AK7Q96M32 723 aa9.8□□□□□ -0.84
TCEA3-205ENST00000476978 ASAP1Q9ULH1 1129 aa9.8□□□□□ -0.84
TCEA3-205ENST00000476978 TOGARAM1Q9Y4F4 1720 aa9.79□□□□□ -0.84
TCEA3-205ENST00000476978 ERVV-2B6SEH9 535 aa9.79□□□□□ -0.84
TCEA3-205ENST00000476978 HSP90AB1P08238 724 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms