RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 SHANK3Q9BYB0 1731 aa17■□□□□ 0.31
APTX-220ENST00000476858 TRIM37O94972 964 aa16.99■□□□□ 0.31
APTX-220ENST00000476858 EYA1Q99502 592 aa16.99■□□□□ 0.31
APTX-220ENST00000476858 NCAPD2Q15021 1401 aa16.97■□□□□ 0.31
APTX-220ENST00000476858 ZEB1P37275 1124 aaPredicted RBP16.97■□□□□ 0.31
APTX-220ENST00000476858 DDX10Q13206 875 aaKnown RBP16.97■□□□□ 0.31
APTX-220ENST00000476858 NPC1L1Q9UHC9 1359 aa16.97■□□□□ 0.31
APTX-220ENST00000476858 EXOC5O00471 708 aa16.96■□□□□ 0.31
APTX-220ENST00000476858 MTHFSP49914 203 aa16.96■□□□□ 0.31
APTX-220ENST00000476858 FAM196AQ6ZSG2 479 aa16.96■□□□□ 0.31
APTX-220ENST00000476858 SBF2Q86WG5 1849 aa16.96■□□□□ 0.3
APTX-220ENST00000476858 OVOS2A0A0G2JMS6 1433 aa16.96■□□□□ 0.3
APTX-220ENST00000476858 AEBP1Q8IUX7 1158 aa16.95■□□□□ 0.3
APTX-220ENST00000476858 CDCA7Q9BWT1 371 aaPredicted RBP16.95■□□□□ 0.3
APTX-220ENST00000476858 RGPD1P0DJD0 1748 aa16.94■□□□□ 0.3
APTX-220ENST00000476858 KCNQ2O43526 872 aa16.94■□□□□ 0.3
APTX-220ENST00000476858 EN1Q05925 392 aaPredicted RBP16.94■□□□□ 0.3
APTX-220ENST00000476858 DDX54Q8TDD1 881 aaKnown RBP16.94■□□□□ 0.3
APTX-220ENST00000476858 COL3A1P02461 1466 aaPredicted RBP16.93■□□□□ 0.3
APTX-220ENST00000476858 ACSBG1Q96GR2 724 aa16.93■□□□□ 0.3
APTX-220ENST00000476858 IL13P35225 146 aa16.92■□□□□ 0.3
APTX-220ENST00000476858 IGSF1Q8N6C5 1336 aa16.92■□□□□ 0.3
APTX-220ENST00000476858 ZCRB1Q8TBF4 217 aaKnown RBP16.91■□□□□ 0.3
APTX-220ENST00000476858 EZH2Q15910 746 aaKnown RBP16.9■□□□□ 0.3
APTX-220ENST00000476858 CCDC125Q86Z20 511 aa16.9■□□□□ 0.3
APTX-220ENST00000476858 CYP27B1O15528 508 aa16.89■□□□□ 0.29
APTX-220ENST00000476858 APBA3O96018 575 aa16.89■□□□□ 0.29
APTX-220ENST00000476858 TATP17735 454 aaPredicted RBP16.89■□□□□ 0.29
APTX-220ENST00000476858 PPP2R1AP30153 589 aa16.89■□□□□ 0.29
APTX-220ENST00000476858 RAPGEF4Q8WZA2 1011 aa16.89■□□□□ 0.29
APTX-220ENST00000476858 PKD1L3Q7Z443 1732 aa16.89■□□□□ 0.29
APTX-220ENST00000476858 BCL9O00512 1426 aa16.88■□□□□ 0.29
APTX-220ENST00000476858 CAMKK2Q96RR4 588 aa16.88■□□□□ 0.29
APTX-220ENST00000476858 NHSQ6T4R5 1651 aa16.88■□□□□ 0.29
APTX-220ENST00000476858 DOT1LQ8TEK3 1739 aa16.87■□□□□ 0.29
APTX-220ENST00000476858 PARD3Q8TEW0 1356 aa16.87■□□□□ 0.29
APTX-220ENST00000476858 TOGARAM1Q9Y4F4 1720 aa16.87■□□□□ 0.29
APTX-220ENST00000476858 SF3B2Q13435 895 aaKnown RBP16.86■□□□□ 0.29
APTX-220ENST00000476858 HMOX1P09601 288 aa16.85■□□□□ 0.29
APTX-220ENST00000476858 BAG6P46379 1132 aa16.85■□□□□ 0.29
APTX-220ENST00000476858 SULT6B1Q6IMI4 303 aa16.85■□□□□ 0.29
APTX-220ENST00000476858 POTEHQ6S545 545 aa16.85■□□□□ 0.29
APTX-220ENST00000476858 BCL11BQ9C0K0 894 aaPredicted RBP16.85■□□□□ 0.29
APTX-220ENST00000476858 PROM2Q8N271 834 aa16.84■□□□□ 0.29
APTX-220ENST00000476858 RREB1Q92766 1687 aa16.84■□□□□ 0.29
APTX-220ENST00000476858 BTAF1O14981 1849 aa16.83■□□□□ 0.28
APTX-220ENST00000476858 ABCB7O75027 752 aa16.83■□□□□ 0.28
APTX-220ENST00000476858 PRIM1P49642 420 aaKnown RBP16.83■□□□□ 0.28
APTX-220ENST00000476858 NUP188Q5SRE5 1749 aa16.82■□□□□ 0.28
APTX-220ENST00000476858 KDRP35968 1356 aa16.82■□□□□ 0.28
APTX-220ENST00000476858 DIAPH1O60610 1272 aaKnown RBP16.82■□□□□ 0.28
APTX-220ENST00000476858 PCDH11XQ9BZA7 1347 aa16.81■□□□□ 0.28
APTX-220ENST00000476858 PCDH11YQ9BZA8 1340 aa16.81■□□□□ 0.28
APTX-220ENST00000476858 ZNF316A6NFI3 1004 aaPredicted RBP16.81■□□□□ 0.28
APTX-220ENST00000476858 SYTL4Q96C24 671 aaPredicted RBP16.8■□□□□ 0.28
APTX-220ENST00000476858 PSDA5PKW4 1024 aaPredicted RBP16.79■□□□□ 0.28
APTX-220ENST00000476858 U2SURPO15042 1029 aaKnown RBP16.79■□□□□ 0.28
APTX-220ENST00000476858 PHKG2P15735 406 aa16.79■□□□□ 0.28
APTX-220ENST00000476858 KCNQ4P56696 695 aa16.79■□□□□ 0.28
APTX-220ENST00000476858 SPG7Q9UQ90 795 aa16.78■□□□□ 0.28
APTX-220ENST00000476858 KDM6AO15550 1401 aaPredicted RBP16.78■□□□□ 0.28
APTX-220ENST00000476858 NKX1-1Q15270 411 aaPredicted RBP16.77■□□□□ 0.28
APTX-220ENST00000476858 ANO8Q9HCE9 1232 aaPredicted RBP16.77■□□□□ 0.28
APTX-220ENST00000476858 ITGB4P16144 1822 aa16.76■□□□□ 0.27
APTX-220ENST00000476858 PLSCR1O15162 318 aa16.76■□□□□ 0.27
APTX-220ENST00000476858 ZNF530Q6P9A1 599 aaPredicted RBP16.76■□□□□ 0.27
APTX-220ENST00000476858 LRRC4BQ9NT99 713 aa16.76■□□□□ 0.27
APTX-220ENST00000476858 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.76■□□□□ 0.271e-6■□□□□ 10.8
APTX-220ENST00000476858 RGPD3A6NKT7 1758 aaPredicted RBP16.75■□□□□ 0.27
APTX-220ENST00000476858 RGPD4Q7Z3J3 1758 aa16.75■□□□□ 0.27
APTX-220ENST00000476858 KAT6BQ8WYB5 2073 aa16.75■□□□□ 0.27
APTX-220ENST00000476858 TXNRD1Q16881 649 aa16.75■□□□□ 0.27
APTX-220ENST00000476858 PHACTR3Q96KR7 559 aa16.75■□□□□ 0.27
APTX-220ENST00000476858 ZNF219Q9P2Y4 722 aaPredicted RBP16.75■□□□□ 0.27
APTX-220ENST00000476858 R3HDM1Q15032 1099 aaKnown RBP16.74■□□□□ 0.27
APTX-220ENST00000476858 MTHFSDQ2M296 383 aaKnown RBP16.74■□□□□ 0.27
APTX-220ENST00000476858 PLEKHO1Q53GL0 409 aaPredicted RBP16.74■□□□□ 0.27
APTX-220ENST00000476858 MPRIPQ6WCQ1 1025 aa16.74■□□□□ 0.27
APTX-220ENST00000476858 IFNL2Q8IZJ0 200 aa16.74■□□□□ 0.27
APTX-220ENST00000476858 PIGBQ92521 554 aa16.74■□□□□ 0.27
APTX-220ENST00000476858 RSPH6AQ9H0K4 717 aa16.74■□□□□ 0.27
APTX-220ENST00000476858 CFAP53Q96M91 514 aa16.72■□□□□ 0.27
APTX-220ENST00000476858 PDGFDQ9GZP0 370 aaPredicted RBP16.72■□□□□ 0.27
APTX-220ENST00000476858 PRKRIP1Q9H875 184 aaPredicted RBP16.72■□□□□ 0.27
APTX-220ENST00000476858 LGR6Q9HBX8 967 aa16.72■□□□□ 0.27
APTX-220ENST00000476858 PAPPAQ13219 1627 aa16.71■□□□□ 0.27
APTX-220ENST00000476858 U2AF1L5P0DN76 240 aaPredicted RBP16.71■□□□□ 0.27
APTX-220ENST00000476858 PRKAR2BP31323 418 aa16.71■□□□□ 0.27
APTX-220ENST00000476858 U2AF1Q01081 240 aaKnown RBP eCLIP16.71■□□□□ 0.272e-8■■■■■ 37
APTX-220ENST00000476858 RALBP1Q15311 655 aa16.71■□□□□ 0.27
APTX-220ENST00000476858 LY75O60449 1722 aa16.7■□□□□ 0.26
APTX-220ENST00000476858 AMOTQ4VCS5 1084 aa16.7■□□□□ 0.26
APTX-220ENST00000476858 CCDC184Q52MB2 194 aa16.7■□□□□ 0.26
APTX-220ENST00000476858 PLEKHG2Q9H7P9 1386 aa16.69■□□□□ 0.26
APTX-220ENST00000476858 ZNF827Q17R98 1081 aa16.69■□□□□ 0.26
APTX-220ENST00000476858 ASAP1Q9ULH1 1129 aa16.69■□□□□ 0.26
APTX-220ENST00000476858 MYBBP1AQ9BQG0 1328 aaKnown RBP16.69■□□□□ 0.26
APTX-220ENST00000476858 PALLDQ8WX93 1383 aa16.67■□□□□ 0.26
APTX-220ENST00000476858 SCN11AQ9UI33 1791 aa16.67■□□□□ 0.26
APTX-220ENST00000476858 DCAF5Q96JK2 942 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms