RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.95■■□□□ 1.42
SMIM4-202ENST00000476842 TRIM37O94972 964 aa23.94■■□□□ 1.42
SMIM4-202ENST00000476842 SF3B2Q13435 895 aaKnown RBP23.94■■□□□ 1.42
SMIM4-202ENST00000476842 SULT6B1Q6IMI4 303 aa23.94■■□□□ 1.42
SMIM4-202ENST00000476842 AEBP1Q8IUX7 1158 aa23.93■■□□□ 1.42
SMIM4-202ENST00000476842 SPG7Q9UQ90 795 aa23.93■■□□□ 1.42
SMIM4-202ENST00000476842 PLEKHG2Q9H7P9 1386 aa23.92■■□□□ 1.42
SMIM4-202ENST00000476842 COL3A1P02461 1466 aaPredicted RBP23.92■■□□□ 1.42
SMIM4-202ENST00000476842 KDRP35968 1356 aa23.91■■□□□ 1.42
SMIM4-202ENST00000476842 PRKRIP1Q9H875 184 aaPredicted RBP23.91■■□□□ 1.42
SMIM4-202ENST00000476842 BCL11BQ9C0K0 894 aaPredicted RBP23.9■■□□□ 1.42
SMIM4-202ENST00000476842 NUDCQ9Y266 331 aa23.9■■□□□ 1.42
SMIM4-202ENST00000476842 PCDH11XQ9BZA7 1347 aa23.89■■□□□ 1.42
SMIM4-202ENST00000476842 PCDH11YQ9BZA8 1340 aa23.89■■□□□ 1.42
SMIM4-202ENST00000476842 U2SURPO15042 1029 aaKnown RBP23.89■■□□□ 1.41
SMIM4-202ENST00000476842 MYBBP1AQ9BQG0 1328 aaKnown RBP23.88■■□□□ 1.41
SMIM4-202ENST00000476842 CYP27B1O15528 508 aa23.88■■□□□ 1.41
SMIM4-202ENST00000476842 AMOTQ4VCS5 1084 aa23.88■■□□□ 1.41
SMIM4-202ENST00000476842 PLEKHO1Q53GL0 409 aaPredicted RBP23.88■■□□□ 1.41
SMIM4-202ENST00000476842 HMOX1P09601 288 aa23.87■■□□□ 1.41
SMIM4-202ENST00000476842 BAG6P46379 1132 aa23.87■■□□□ 1.41
SMIM4-202ENST00000476842 APBA3O96018 575 aa23.86■■□□□ 1.41
SMIM4-202ENST00000476842 DEFB132Q7Z7B7 95 aa23.86■■□□□ 1.41
SMIM4-202ENST00000476842 RGPD1P0DJD0 1748 aa23.86■■□□□ 1.41
SMIM4-202ENST00000476842 NKX1-1Q15270 411 aaPredicted RBP23.85■■□□□ 1.41
SMIM4-202ENST00000476842 ACSBG1Q96GR2 724 aa23.85■■□□□ 1.41
SMIM4-202ENST00000476842 KCNQ2O43526 872 aa23.84■■□□□ 1.41
SMIM4-202ENST00000476842 PTF1AQ7RTS3 328 aa23.84■■□□□ 1.41
SMIM4-202ENST00000476842 IFNL2Q8IZJ0 200 aa23.84■■□□□ 1.41
SMIM4-202ENST00000476842 PHKG2P15735 406 aa23.83■■□□□ 1.41
SMIM4-202ENST00000476842 EN1Q05925 392 aaPredicted RBP23.82■■□□□ 1.4
SMIM4-202ENST00000476842 U2AF1L5P0DN76 240 aaPredicted RBP23.81■■□□□ 1.4
SMIM4-202ENST00000476842 U2AF1Q01081 240 aaKnown RBP eCLIP23.81■■□□□ 1.4
SMIM4-202ENST00000476842 PLSCR1O15162 318 aa23.8■■□□□ 1.4
SMIM4-202ENST00000476842 PRIM1P49642 420 aaKnown RBP23.8■■□□□ 1.4
SMIM4-202ENST00000476842 CAMKK2Q96RR4 588 aa23.8■■□□□ 1.4
SMIM4-202ENST00000476842 FCHSD2O94868 740 aa23.79■■□□□ 1.4
SMIM4-202ENST00000476842 ZNF530Q6P9A1 599 aaPredicted RBP23.79■■□□□ 1.4
SMIM4-202ENST00000476842 PKD1L3Q7Z443 1732 aa23.79■■□□□ 1.4
SMIM4-202ENST00000476842 RSPH6AQ9H0K4 717 aa23.78■■□□□ 1.4
SMIM4-202ENST00000476842 SHANK3Q9BYB0 1731 aa23.78■■□□□ 1.4
SMIM4-202ENST00000476842 HSP90AB1P08238 724 aaKnown RBP23.77■■□□□ 1.4
SMIM4-202ENST00000476842 ANP32CO43423 234 aa23.76■■□□□ 1.39
SMIM4-202ENST00000476842 EZH2Q15910 746 aaKnown RBP23.76■■□□□ 1.39
SMIM4-202ENST00000476842 C1orf141Q5JVX7 400 aa23.76■■□□□ 1.39
SMIM4-202ENST00000476842 SYTL4Q96C24 671 aaPredicted RBP23.76■■□□□ 1.39
SMIM4-202ENST00000476842 PRKAR2BP31323 418 aa23.75■■□□□ 1.39
SMIM4-202ENST00000476842 MTHFSDQ2M296 383 aaKnown RBP23.75■■□□□ 1.39
SMIM4-202ENST00000476842 DCAF5Q96JK2 942 aa23.75■■□□□ 1.39
SMIM4-202ENST00000476842 TNS1Q9HBL0 1735 aaKnown RBP23.74■■□□□ 1.39
SMIM4-202ENST00000476842 AKAP4Q5JQC9 854 aa23.74■■□□□ 1.39
SMIM4-202ENST00000476842 SBF2Q86WG5 1849 aa23.74■■□□□ 1.39
SMIM4-202ENST00000476842 PHACTR3Q96KR7 559 aa23.72■■□□□ 1.39
SMIM4-202ENST00000476842 NHSQ6T4R5 1651 aa23.71■■□□□ 1.39
SMIM4-202ENST00000476842 ERVV-2B6SEH9 535 aa23.71■■□□□ 1.39
SMIM4-202ENST00000476842 GAS2L2Q8NHY3 880 aa23.71■■□□□ 1.39
SMIM4-202ENST00000476842 MPRIPQ6WCQ1 1025 aa23.7■■□□□ 1.38
SMIM4-202ENST00000476842 PROM2Q8N271 834 aa23.7■■□□□ 1.38
SMIM4-202ENST00000476842 PNNQ9H307 717 aaKnown RBP23.7■■□□□ 1.38
SMIM4-202ENST00000476842 PIGBQ92521 554 aa23.69■■□□□ 1.38
SMIM4-202ENST00000476842 TXNRD1Q16881 649 aa23.67■■□□□ 1.38
SMIM4-202ENST00000476842 PLEKHF1Q96S99 279 aa23.67■■□□□ 1.38
SMIM4-202ENST00000476842 TMOD3Q9NYL9 352 aa23.67■■□□□ 1.38
SMIM4-202ENST00000476842 KDM6AO15550 1401 aaPredicted RBP23.66■■□□□ 1.38
SMIM4-202ENST00000476842 GNAT3A8MTJ3 354 aa23.65■■□□□ 1.38
SMIM4-202ENST00000476842 RNMTO43148 476 aaKnown RBP23.65■■□□□ 1.38
SMIM4-202ENST00000476842 NEFMP07197 916 aa23.65■■□□□ 1.38
SMIM4-202ENST00000476842 CABP4P57796 275 aa23.65■■□□□ 1.38
SMIM4-202ENST00000476842 WDR43Q15061 677 aaKnown RBP eCLIP23.65■■□□□ 1.38
SMIM4-202ENST00000476842 LGR6Q9HBX8 967 aa23.65■■□□□ 1.38
SMIM4-202ENST00000476842 DOT1LQ8TEK3 1739 aa23.64■■□□□ 1.37
SMIM4-202ENST00000476842 SMARCC1Q92922 1105 aaPredicted RBP23.63■■□□□ 1.37
SMIM4-202ENST00000476842 CCDC184Q52MB2 194 aa23.62■■□□□ 1.37
SMIM4-202ENST00000476842 SLC27A3Q5K4L6 730 aa23.62■■□□□ 1.37
SMIM4-202ENST00000476842 NFATC2IPQ8NCF5 419 aa23.62■■□□□ 1.37
SMIM4-202ENST00000476842 ADAMTS8Q9UP79 889 aa23.62■■□□□ 1.37
SMIM4-202ENST00000476842 MAP3K5Q99683 1374 aa23.61■■□□□ 1.37
SMIM4-202ENST00000476842 KAT6BQ8WYB5 2073 aa23.61■■□□□ 1.37
SMIM4-202ENST00000476842 TOGARAM1Q9Y4F4 1720 aa23.6■■□□□ 1.37
SMIM4-202ENST00000476842 NBPF14Q5TI25 921 aa23.6■■□□□ 1.37
SMIM4-202ENST00000476842 IL17REQ8NFR9 667 aa23.6■■□□□ 1.37
SMIM4-202ENST00000476842 SLC52A2Q9HAB3 445 aa23.6■■□□□ 1.37
SMIM4-202ENST00000476842 ASAP1Q9ULH1 1129 aa23.6■■□□□ 1.37
SMIM4-202ENST00000476842 BTAF1O14981 1849 aa23.6■■□□□ 1.37
SMIM4-202ENST00000476842 HTATSF1O43719 755 aaKnown RBP23.59■■□□□ 1.37
SMIM4-202ENST00000476842 ATG3Q9NT62 314 aa23.59■■□□□ 1.37
SMIM4-202ENST00000476842 LRRC4BQ9NT99 713 aa23.59■■□□□ 1.37
SMIM4-202ENST00000476842 MAPK8IP3Q9UPT6 1336 aa23.59■■□□□ 1.37
SMIM4-202ENST00000476842 RGPD3A6NKT7 1758 aaPredicted RBP23.58■■□□□ 1.37
SMIM4-202ENST00000476842 RGPD4Q7Z3J3 1758 aa23.58■■□□□ 1.37
SMIM4-202ENST00000476842 PALLDQ8WX93 1383 aa23.58■■□□□ 1.37
SMIM4-202ENST00000476842 NFE2L2Q16236 605 aa23.57■■□□□ 1.36
SMIM4-202ENST00000476842 RTF1Q92541 710 aaKnown RBP23.56■■□□□ 1.36
SMIM4-202ENST00000476842 RUNDC1Q96C34 613 aa23.56■■□□□ 1.36
SMIM4-202ENST00000476842 MRS2Q9HD23 443 aa23.56■■□□□ 1.36
SMIM4-202ENST00000476842 CCNL1Q9UK58 526 aaPredicted RBP23.56■■□□□ 1.36
SMIM4-202ENST00000476842 PNISRQ8TF01 805 aaKnown RBP23.55■■□□□ 1.36
SMIM4-202ENST00000476842 CEMIPQ8WUJ3 1361 aa23.54■■□□□ 1.36
SMIM4-202ENST00000476842 HMGB2P26583 209 aaKnown RBP23.54■■□□□ 1.36
SMIM4-202ENST00000476842 RREB1Q92766 1687 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms