RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, human

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-208	ENST00000476594	NHS	Q6T4R5	1651 aa		13.92	□□□□□ -0.18
CCM2-208	ENST00000476594	PSD	A5PKW4	1024 aa	Predicted RBP	13.92	□□□□□ -0.18
CCM2-208	ENST00000476594	R3HDM1	Q15032	1099 aa	Known RBP	13.92	□□□□□ -0.18
CCM2-208	ENST00000476594	POLK	Q9UBT6	870 aa		13.92	□□□□□ -0.18
CCM2-208	ENST00000476594	MAP2	P11137	1827 aa	Known RBP	13.92	□□□□□ -0.18
CCM2-208	ENST00000476594	MEGF6	O75095	1541 aa		13.91	□□□□□ -0.18
CCM2-208	ENST00000476594	HMGB2	P26583	209 aa	Known RBP	13.91	□□□□□ -0.18
CCM2-208	ENST00000476594	USHBP1	Q8N6Y0	703 aa		13.91	□□□□□ -0.18
CCM2-208	ENST00000476594	ACSBG1	Q96GR2	724 aa		13.91	□□□□□ -0.18
CCM2-208	ENST00000476594	NUP188	Q5SRE5	1749 aa		13.9	□□□□□ -0.18
CCM2-208	ENST00000476594	SPG7	Q9UQ90	795 aa		13.9	□□□□□ -0.18
CCM2-208	ENST00000476594	PLEKHG2	Q9H7P9	1386 aa		13.9	□□□□□ -0.18
CCM2-208	ENST00000476594	KAT6B	Q8WYB5	2073 aa		13.89	□□□□□ -0.19
CCM2-208	ENST00000476594	RGPD2	P0DJD1	1756 aa		13.89	□□□□□ -0.19
CCM2-208	ENST00000476594	SYTL4	Q96C24	671 aa	Predicted RBP	13.89	□□□□□ -0.19
CCM2-208	ENST00000476594	KCNQ2	O43526	872 aa		13.88	□□□□□ -0.19
CCM2-208	ENST00000476594	TXNRD1	Q16881	649 aa		13.88	□□□□□ -0.19
CCM2-208	ENST00000476594	STK32B	Q9NY57	414 aa		13.88	□□□□□ -0.19
CCM2-208	ENST00000476594	LRP5	O75197	1615 aa		13.87	□□□□□ -0.19
CCM2-208	ENST00000476594	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.87	□□□□□ -0.19
CCM2-208	ENST00000476594	NCAPD2	Q15021	1401 aa		13.87	□□□□□ -0.19
CCM2-208	ENST00000476594	EIF4A2	Q14240	407 aa	Known RBP	13.86	□□□□□ -0.19
CCM2-208	ENST00000476594	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.86	□□□□□ -0.19
CCM2-208	ENST00000476594	EYA1	Q99502	592 aa		13.86	□□□□□ -0.19
CCM2-208	ENST00000476594	SRCAP	Q6ZRS2	3230 aa		13.86	□□□□□ -0.19
CCM2-208	ENST00000476594	NPC1L1	Q9UHC9	1359 aa		13.85	□□□□□ -0.19
CCM2-208	ENST00000476594	SLC27A3	Q5K4L6	730 aa		13.85	□□□□□ -0.19
CCM2-208	ENST00000476594	PTF1A	Q7RTS3	328 aa		13.85	□□□□□ -0.19
CCM2-208	ENST00000476594	BTAF1	O14981	1849 aa		13.85	□□□□□ -0.19
CCM2-208	ENST00000476594	PRIM1	P49642	420 aa	Known RBP	13.84	□□□□□ -0.19
CCM2-208	ENST00000476594	IGSF1	Q8N6C5	1336 aa		13.84	□□□□□ -0.19
CCM2-208	ENST00000476594	DOT1L	Q8TEK3	1739 aa		13.84	□□□□□ -0.19
CCM2-208	ENST00000476594	IFNL2	Q8IZJ0	200 aa		13.83	□□□□□ -0.2
CCM2-208	ENST00000476594	PKD1L3	Q7Z443	1732 aa		13.83	□□□□□ -0.2
CCM2-208	ENST00000476594	SHANK3	Q9BYB0	1731 aa		13.83	□□□□□ -0.2
CCM2-208	ENST00000476594	HSP90AB1	P08238	724 aa	Known RBP	13.82	□□□□□ -0.2
CCM2-208	ENST00000476594	SLC15A2	Q16348	729 aa		13.82	□□□□□ -0.2
CCM2-208	ENST00000476594	AMOT	Q4VCS5	1084 aa		13.82	□□□□□ -0.2
CCM2-208	ENST00000476594	CC2D1B	Q5T0F9	858 aa	Known RBP	13.82	□□□□□ -0.2
CCM2-208	ENST00000476594	SPON1	Q9HCB6	807 aa		13.82	□□□□□ -0.2
CCM2-208	ENST00000476594	PER1	O15534	1290 aa	Predicted RBP	13.81	□□□□□ -0.2
CCM2-208	ENST00000476594	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.81	□□□□□ -0.2
CCM2-208	ENST00000476594	PROM2	Q8N271	834 aa		13.81	□□□□□ -0.2
CCM2-208	ENST00000476594	SMARCC1	Q92922	1105 aa	Predicted RBP	13.81	□□□□□ -0.2
CCM2-208	ENST00000476594	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.81	□□□□□ -0.2
CCM2-208	ENST00000476594	CYP27B1	O15528	508 aa		13.8	□□□□□ -0.2
CCM2-208	ENST00000476594	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.8	□□□□□ -0.2
CCM2-208	ENST00000476594	MTHFS	P49914	203 aa		13.79	□□□□□ -0.2
CCM2-208	ENST00000476594	NKX1-1	Q15270	411 aa	Predicted RBP	13.79	□□□□□ -0.2
CCM2-208	ENST00000476594	MPRIP	Q6WCQ1	1025 aa		13.79	□□□□□ -0.2
CCM2-208	ENST00000476594	PHKG2	P15735	406 aa		13.78	□□□□□ -0.2
CCM2-208	ENST00000476594	C1orf141	Q5JVX7	400 aa		13.78	□□□□□ -0.2
CCM2-208	ENST00000476594	CFAP53	Q96M91	514 aa		13.78	□□□□□ -0.2
CCM2-208	ENST00000476594	TMOD3	Q9NYL9	352 aa		13.78	□□□□□ -0.2
CCM2-208	ENST00000476594	CCNL1	Q9UK58	526 aa	Predicted RBP	13.78	□□□□□ -0.2
CCM2-208	ENST00000476594	DIAPH1	O60610	1272 aa	Known RBP	13.77	□□□□□ -0.21
CCM2-208	ENST00000476594	SULT6B1	Q6IMI4	303 aa		13.77	□□□□□ -0.21
CCM2-208	ENST00000476594	PALLD	Q8WX93	1383 aa		13.76	□□□□□ -0.21
CCM2-208	ENST00000476594	IL13	P35225	146 aa		13.76	□□□□□ -0.21
CCM2-208	ENST00000476594	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.76	□□□□□ -0.21
CCM2-208	ENST00000476594	DCAF5	Q96JK2	942 aa		13.76	□□□□□ -0.21
CCM2-208	ENST00000476594	PAPPA	Q13219	1627 aa		13.75	□□□□□ -0.21
CCM2-208	ENST00000476594	KDR	P35968	1356 aa		13.75	□□□□□ -0.21
CCM2-208	ENST00000476594	CNGB1	Q14028	1251 aa	Predicted RBP	13.75	□□□□□ -0.21
CCM2-208	ENST00000476594	MTFR1L	Q9H019	292 aa		13.75	□□□□□ -0.21
CCM2-208	ENST00000476594	TFCP2L1	Q9NZI6	479 aa		13.75	□□□□□ -0.21
CCM2-208	ENST00000476594	LY75	O60449	1722 aa		13.75	□□□□□ -0.21
CCM2-208	ENST00000476594	DCAF8L1	A6NGE4	600 aa		13.74	□□□□□ -0.21
CCM2-208	ENST00000476594	ERVV-2	B6SEH9	535 aa		13.74	□□□□□ -0.21
CCM2-208	ENST00000476594	SLC16A10	Q8TF71	515 aa		13.74	□□□□□ -0.21
CCM2-208	ENST00000476594	LRRC4B	Q9NT99	713 aa		13.74	□□□□□ -0.21
CCM2-208	ENST00000476594	CASZ1	Q86V15	1759 aa		13.73	□□□□□ -0.21
CCM2-208	ENST00000476594	FLAD1	Q8NFF5	587 aa		13.73	□□□□□ -0.21
CCM2-208	ENST00000476594	NUDC	Q9Y266	331 aa		13.73	□□□□□ -0.21
CCM2-208	ENST00000476594	ZBTB7A	O95365	584 aa		13.72	□□□□□ -0.21
CCM2-208	ENST00000476594	AEBP1	Q8IUX7	1158 aa		13.72	□□□□□ -0.21
CCM2-208	ENST00000476594	PIGB	Q92521	554 aa		13.72	□□□□□ -0.21
CCM2-208	ENST00000476594	AKT1S1	Q96B36	256 aa		13.72	□□□□□ -0.21
CCM2-208	ENST00000476594	ITGB4	P16144	1822 aa		13.71	□□□□□ -0.21
CCM2-208	ENST00000476594	TOGARAM1	Q9Y4F4	1720 aa		13.71	□□□□□ -0.21
CCM2-208	ENST00000476594	U2SURP	O15042	1029 aa	Known RBP	13.71	□□□□□ -0.21
CCM2-208	ENST00000476594	POLD1	P28340	1107 aa		13.71	□□□□□ -0.21
CCM2-208	ENST00000476594	CABP4	P57796	275 aa		13.71	□□□□□ -0.21
CCM2-208	ENST00000476594	ZNF827	Q17R98	1081 aa		13.71	□□□□□ -0.21
CCM2-208	ENST00000476594	AKAP4	Q5JQC9	854 aa		13.71	□□□□□ -0.21
CCM2-208	ENST00000476594	AK7	Q96M32	723 aa		13.71	□□□□□ -0.21
CCM2-208	ENST00000476594	QSER1	Q2KHR3	1735 aa		13.7	□□□□□ -0.22
CCM2-208	ENST00000476594	ZEB1	P37275	1124 aa	Predicted RBP	13.7	□□□□□ -0.22
CCM2-208	ENST00000476594	LOC102724428	A0A0B4J2F2	783 aa		13.69	□□□□□ -0.22
CCM2-208	ENST00000476594	HMOX1	P09601	288 aa		13.69	□□□□□ -0.22
CCM2-208	ENST00000476594	SIK1	P57059	783 aa		13.69	□□□□□ -0.22
CCM2-208	ENST00000476594	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.69	□□□□□ -0.22
CCM2-208	ENST00000476594	C5	P01031	1676 aa		13.69	□□□□□ -0.22
CCM2-208	ENST00000476594	KCNQ4	P56696	695 aa		13.68	□□□□□ -0.22
CCM2-208	ENST00000476594	GAS2L2	Q8NHY3	880 aa		13.68	□□□□□ -0.22
CCM2-208	ENST00000476594	PNPLA7	Q6ZV29	1317 aa		13.67	□□□□□ -0.22
CCM2-208	ENST00000476594	NEFM	P07197	916 aa		13.67	□□□□□ -0.22
CCM2-208	ENST00000476594	ATP6V1A	P38606	617 aa		13.67	□□□□□ -0.22
CCM2-208	ENST00000476594	COL3A1	P02461	1466 aa	Predicted RBP	13.67	□□□□□ -0.22
CCM2-208	ENST00000476594	PPP2R1A	P30153	589 aa		13.66	□□□□□ -0.22

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