RNA–Protein interactions for RNA: ENST00000476142.1

CCDC66-216, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-216ENST00000476142 RGPD8O14715 1765 aaPredicted RBP11.23□□□□□ -0.61
CCDC66-216ENST00000476142 HAP1P54257 671 aaPredicted RBP11.22□□□□□ -0.61
CCDC66-216ENST00000476142 TBC1D32Q96NH3 1257 aa11.22□□□□□ -0.61
CCDC66-216ENST00000476142 NALCNQ8IZF0 1738 aa11.22□□□□□ -0.61
CCDC66-216ENST00000476142 HOXC9P31274 260 aa11.22□□□□□ -0.61
CCDC66-216ENST00000476142 NFKBIBQ15653 356 aa11.22□□□□□ -0.61
CCDC66-216ENST00000476142 USP35Q9P2H5 1018 aa11.22□□□□□ -0.61
CCDC66-216ENST00000476142 ANKARQ7Z5J8 1434 aa11.21□□□□□ -0.61
CCDC66-216ENST00000476142 XRN1Q8IZH2 1706 aaKnown RBP11.21□□□□□ -0.61
CCDC66-216ENST00000476142 SIRT2Q8IXJ6 389 aa11.21□□□□□ -0.61
CCDC66-216ENST00000476142 GCC1Q96CN9 775 aa11.21□□□□□ -0.61
CCDC66-216ENST00000476142 PHF8Q9UPP1 1060 aa11.21□□□□□ -0.61
CCDC66-216ENST00000476142 SLC4A2P04920 1241 aa11.21□□□□□ -0.62
CCDC66-216ENST00000476142 GAS2L2Q8NHY3 880 aa11.21□□□□□ -0.62
CCDC66-216ENST00000476142 IGSF1Q8N6C5 1336 aa11.2□□□□□ -0.62
CCDC66-216ENST00000476142 PIK3C2AO00443 1686 aa11.2□□□□□ -0.62
CCDC66-216ENST00000476142 ESCO1Q5FWF5 840 aa11.2□□□□□ -0.62
CCDC66-216ENST00000476142 USHBP1Q8N6Y0 703 aa11.2□□□□□ -0.62
CCDC66-216ENST00000476142 SLKQ9H2G2 1235 aaPredicted RBP11.2□□□□□ -0.62
CCDC66-216ENST00000476142 RIMS1Q86UR5 1692 aaKnown RBP11.2□□□□□ -0.62
CCDC66-216ENST00000476142 CRB1P82279 1406 aa11.2□□□□□ -0.62
CCDC66-216ENST00000476142 C22orf23Q9BZE7 217 aa11.2□□□□□ -0.62
CCDC66-216ENST00000476142 KIAA0232Q92628 1395 aa11.19□□□□□ -0.62
CCDC66-216ENST00000476142 RGPD1P0DJD0 1748 aa11.19□□□□□ -0.62
CCDC66-216ENST00000476142 PSME1Q06323 249 aa11.19□□□□□ -0.62
CCDC66-216ENST00000476142 SLC4A10Q6U841 1118 aa11.19□□□□□ -0.62
CCDC66-216ENST00000476142 NECTIN2Q92692 538 aa11.19□□□□□ -0.62
CCDC66-216ENST00000476142 KDRP35968 1356 aa11.18□□□□□ -0.62
CCDC66-216ENST00000476142 SPRYD3Q8NCJ5 442 aa11.18□□□□□ -0.62
CCDC66-216ENST00000476142 GNAT3A8MTJ3 354 aa11.18□□□□□ -0.62
CCDC66-216ENST00000476142 INTS3Q68E01 1043 aaKnown RBP11.18□□□□□ -0.62
CCDC66-216ENST00000476142 APBB1O00213 710 aa11.17□□□□□ -0.62
CCDC66-216ENST00000476142 FMN2Q9NZ56 1722 aa11.17□□□□□ -0.62
CCDC66-216ENST00000476142 MSH6P52701 1360 aa11.17□□□□□ -0.62
CCDC66-216ENST00000476142 F6X3S4 739 aa11.17□□□□□ -0.62
CCDC66-216ENST00000476142 XPCQ01831 940 aaPredicted RBP11.17□□□□□ -0.62
CCDC66-216ENST00000476142 LMOD2Q6P5Q4 547 aa11.17□□□□□ -0.62
CCDC66-216ENST00000476142 TBC1D2Q9BYX2 928 aa11.17□□□□□ -0.62
CCDC66-216ENST00000476142 PTPRCP08575 1304 aa11.17□□□□□ -0.62
CCDC66-216ENST00000476142 FRAT2O75474 233 aaPredicted RBP11.16□□□□□ -0.62
CCDC66-216ENST00000476142 G2E3Q7L622 706 aa11.16□□□□□ -0.62
CCDC66-216ENST00000476142 MEIS3Q99687 375 aa11.16□□□□□ -0.62
CCDC66-216ENST00000476142 STK31Q9BXU1 1019 aa11.16□□□□□ -0.62
CCDC66-216ENST00000476142 RGS12O14924 1447 aa11.16□□□□□ -0.62
CCDC66-216ENST00000476142 BMP2KLQ5H9B9 411 aa11.16□□□□□ -0.62
CCDC66-216ENST00000476142 KIF24Q5T7B8 1368 aa11.15□□□□□ -0.62
CCDC66-216ENST00000476142 MAP3K5Q99683 1374 aa11.14□□□□□ -0.63
CCDC66-216ENST00000476142 HTATSF1O43719 755 aaKnown RBP11.14□□□□□ -0.63
CCDC66-216ENST00000476142 CEP85Q6P2H3 762 aa11.14□□□□□ -0.63
CCDC66-216ENST00000476142 ANKRD44Q8N8A2 993 aa11.14□□□□□ -0.63
CCDC66-216ENST00000476142 IL17REQ8NFR9 667 aa11.14□□□□□ -0.63
CCDC66-216ENST00000476142 C16orf71Q8IYS4 520 aaPredicted RBP11.13□□□□□ -0.63
CCDC66-216ENST00000476142 ORAI2Q96SN7 254 aa11.13□□□□□ -0.63
CCDC66-216ENST00000476142 DCTPP1Q9H773 170 aa11.13□□□□□ -0.63
CCDC66-216ENST00000476142 FKBP5Q13451 457 aaPredicted RBP11.13□□□□□ -0.63
CCDC66-216ENST00000476142 IP6K1Q92551 441 aa11.13□□□□□ -0.63
CCDC66-216ENST00000476142 ADGRL3Q9HAR2 1447 aa11.12□□□□□ -0.63
CCDC66-216ENST00000476142 RTL1A6NKG5 1358 aa11.12□□□□□ -0.63
CCDC66-216ENST00000476142 SMARCA5O60264 1052 aaPredicted RBP11.12□□□□□ -0.63
CCDC66-216ENST00000476142 CCDC30Q5VVM6 783 aa11.12□□□□□ -0.63
CCDC66-216ENST00000476142 RPAP2Q8IXW5 612 aaPredicted RBP11.12□□□□□ -0.63
CCDC66-216ENST00000476142 TAF7Q15545 349 aaPredicted RBP11.12□□□□□ -0.63
CCDC66-216ENST00000476142 NBPF6Q5VWK0 638 aa11.12□□□□□ -0.63
CCDC66-216ENST00000476142 TBC1D9Q6ZT07 1266 aa11.12□□□□□ -0.63
CCDC66-216ENST00000476142 LRRC59Q96AG4 307 aaKnown RBP11.12□□□□□ -0.63
CCDC66-216ENST00000476142 NBPF4Q96M43 638 aa11.12□□□□□ -0.63
CCDC66-216ENST00000476142 NPHP4O75161 1426 aaPredicted RBP11.12□□□□□ -0.63
CCDC66-216ENST00000476142 ATP10DQ9P241 1426 aa11.12□□□□□ -0.63
CCDC66-216ENST00000476142 CCT4P50991 539 aaKnown RBP11.11□□□□□ -0.63
CCDC66-216ENST00000476142 FLIIQ13045 1269 aa11.11□□□□□ -0.63
CCDC66-216ENST00000476142 HSCBQ8IWL3 235 aa11.11□□□□□ -0.63
CCDC66-216ENST00000476142 PLEKHM2Q8IWE5 1019 aa11.11□□□□□ -0.63
CCDC66-216ENST00000476142 KCNH5Q8NCM2 988 aa11.11□□□□□ -0.63
CCDC66-216ENST00000476142 OTUD7AQ8TE49 926 aaPredicted RBP11.11□□□□□ -0.63
CCDC66-216ENST00000476142 NWD1Q149M9 1564 aa11.11□□□□□ -0.63
CCDC66-216ENST00000476142 CHD2O14647 1828 aaKnown RBP11.1□□□□□ -0.63
CCDC66-216ENST00000476142 MARF1Q9Y4F3 1742 aaKnown RBP11.1□□□□□ -0.63
CCDC66-216ENST00000476142 GSPT1P15170 499 aaKnown RBP11.1□□□□□ -0.63
CCDC66-216ENST00000476142 PROSER2Q86WR7 435 aaPredicted RBP11.1□□□□□ -0.63
CCDC66-216ENST00000476142 HMMRO75330 724 aa11.1□□□□□ -0.63
CCDC66-216ENST00000476142 CDC45O75419 566 aa11.1□□□□□ -0.63
CCDC66-216ENST00000476142 EIF2S2P20042 333 aaKnown RBP11.1□□□□□ -0.63
CCDC66-216ENST00000476142 GSE1Q14687 1217 aa11.09□□□□□ -0.63
CCDC66-216ENST00000476142 HDGFL1Q5TGJ6 251 aa11.09□□□□□ -0.63
CCDC66-216ENST00000476142 ANTXR1Q9H6X2 564 aa11.09□□□□□ -0.63
CCDC66-216ENST00000476142 SOCS7O14512 581 aa11.09□□□□□ -0.63
CCDC66-216ENST00000476142 GCP02774 474 aa11.09□□□□□ -0.63
CCDC66-216ENST00000476142 GNAI2P04899 355 aa11.09□□□□□ -0.63
CCDC66-216ENST00000476142 LGR6Q9HBX8 967 aa11.09□□□□□ -0.63
CCDC66-216ENST00000476142 RBM25P49756 843 aaKnown RBP11.08□□□□□ -0.64
CCDC66-216ENST00000476142 TTC22Q5TAA0 569 aa11.08□□□□□ -0.64
CCDC66-216ENST00000476142 ZNF530Q6P9A1 599 aaPredicted RBP11.08□□□□□ -0.64
CCDC66-216ENST00000476142 ZNF142P52746 1687 aaPredicted RBP11.08□□□□□ -0.64
CCDC66-216ENST00000476142 MPRIPQ6WCQ1 1025 aa11.07□□□□□ -0.64
CCDC66-216ENST00000476142 NFAT5O94916 1531 aa11.07□□□□□ -0.64
CCDC66-216ENST00000476142 TEFQ10587 303 aa11.07□□□□□ -0.64
CCDC66-216ENST00000476142 EXOC6BQ9Y2D4 811 aa11.07□□□□□ -0.64
CCDC66-216ENST00000476142 LTN1O94822 1766 aa11.07□□□□□ -0.64
CCDC66-216ENST00000476142 HSP90AB1P08238 724 aaKnown RBP11.06□□□□□ -0.64
CCDC66-216ENST00000476142 KRT28Q7Z3Y7 464 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms