RNA–Protein interactions for RNA: ENST00000475875.1

CSNK2B-207, Transcript of casein kinase 2 beta, humanhuman

TSL 1 (best)

Gene CSNK2B, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2B-207ENST00000475875 SYTL4Q96C24 671 aaPredicted RBP20.96■□□□□ 0.95
CSNK2B-207ENST00000475875 NSD2O96028 1365 aa20.96■□□□□ 0.95
CSNK2B-207ENST00000475875 MSL1Q68DK7 614 aa20.95■□□□□ 0.94
CSNK2B-207ENST00000475875 USP54Q70EL1 1684 aa20.94■□□□□ 0.94
CSNK2B-207ENST00000475875 KTN1Q86UP2 1357 aaKnown RBP20.94■□□□□ 0.94
CSNK2B-207ENST00000475875 PRELPP51888 382 aa20.92■□□□□ 0.94
CSNK2B-207ENST00000475875 IGSF1Q8N6C5 1336 aa20.92■□□□□ 0.94
CSNK2B-207ENST00000475875 COL13A1Q5TAT6 717 aaPredicted RBP20.91■□□□□ 0.94
CSNK2B-207ENST00000475875 JMYQ8N9B5 988 aa20.91■□□□□ 0.94
CSNK2B-207ENST00000475875 USP47Q96K76 1375 aa20.91■□□□□ 0.94
CSNK2B-207ENST00000475875 CICQ96RK0 1608 aaPredicted RBP20.9■□□□□ 0.94
CSNK2B-207ENST00000475875 KLRG1Q96E93 195 aa20.89■□□□□ 0.93
CSNK2B-207ENST00000475875 DOT1LQ8TEK3 1739 aa20.89■□□□□ 0.93
CSNK2B-207ENST00000475875 LTN1O94822 1766 aa20.87■□□□□ 0.93
CSNK2B-207ENST00000475875 FAM208AQ9UK61 1670 aaKnown RBP20.87■□□□□ 0.93
CSNK2B-207ENST00000475875 TNS4Q8IZW8 715 aa20.87■□□□□ 0.93
CSNK2B-207ENST00000475875 MON2Q7Z3U7 1717 aa20.86■□□□□ 0.93
CSNK2B-207ENST00000475875 WDR90Q96KV7 1748 aa20.85■□□□□ 0.93
CSNK2B-207ENST00000475875 ZCRB1Q8TBF4 217 aaKnown RBP20.85■□□□□ 0.93
CSNK2B-207ENST00000475875 RBM46Q8TBY0 533 aaKnown RBP20.85■□□□□ 0.93
CSNK2B-207ENST00000475875 IP6K1Q92551 441 aa20.85■□□□□ 0.93
CSNK2B-207ENST00000475875 CAPN15O75808 1086 aa20.84■□□□□ 0.93
CSNK2B-207ENST00000475875 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.84■□□□□ 0.93
CSNK2B-207ENST00000475875 PCNTO95613 3336 aa20.84■□□□□ 0.93
CSNK2B-207ENST00000475875 NSD3Q9BZ95 1437 aa20.83■□□□□ 0.93
CSNK2B-207ENST00000475875 C5P01031 1676 aa20.83■□□□□ 0.92
CSNK2B-207ENST00000475875 NME9Q86XW9 330 aa20.82■□□□□ 0.92
CSNK2B-207ENST00000475875 SBNO2Q9Y2G9 1366 aa20.82■□□□□ 0.92
CSNK2B-207ENST00000475875 FSTL1Q12841 308 aa20.81■□□□□ 0.92
CSNK2B-207ENST00000475875 CGNL1Q0VF96 1302 aa20.79■□□□□ 0.92
CSNK2B-207ENST00000475875 PALLDQ8WX93 1383 aa20.77■□□□□ 0.92
CSNK2B-207ENST00000475875 AK7Q96M32 723 aa20.77■□□□□ 0.92
CSNK2B-207ENST00000475875 NMRK2Q9NPI5 230 aa20.77■□□□□ 0.92
CSNK2B-207ENST00000475875 WWC3Q9ULE0 1092 aa20.77■□□□□ 0.92
CSNK2B-207ENST00000475875 EDC4Q6P2E9 1401 aaKnown RBP20.77■□□□□ 0.91
CSNK2B-207ENST00000475875 CD163L1Q9NR16 1453 aa20.76■□□□□ 0.91
CSNK2B-207ENST00000475875 C16orf71Q8IYS4 520 aaPredicted RBP20.76■□□□□ 0.91
CSNK2B-207ENST00000475875 LTV1Q96GA3 475 aaPredicted RBP20.76■□□□□ 0.91
CSNK2B-207ENST00000475875 MEGF6O75095 1541 aa20.76■□□□□ 0.91
CSNK2B-207ENST00000475875 SSFA2P28290 1259 aa20.75■□□□□ 0.91
CSNK2B-207ENST00000475875 HDGFL2Q7Z4V5 671 aaPredicted RBP20.75■□□□□ 0.91
CSNK2B-207ENST00000475875 TAF1LQ8IZX4 1826 aa20.75■□□□□ 0.91
CSNK2B-207ENST00000475875 C4BP0C0L5 1744 aa20.75■□□□□ 0.91
CSNK2B-207ENST00000475875 PLEKHG2Q9H7P9 1386 aa20.74■□□□□ 0.91
CSNK2B-207ENST00000475875 SMARCC1Q92922 1105 aaPredicted RBP20.74■□□□□ 0.91
CSNK2B-207ENST00000475875 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.73■□□□□ 0.91
CSNK2B-207ENST00000475875 TGFB2P61812 414 aa20.73■□□□□ 0.91
CSNK2B-207ENST00000475875 C10orf71Q711Q0 1435 aa20.72■□□□□ 0.91
CSNK2B-207ENST00000475875 HTRA3P83110 453 aa20.72■□□□□ 0.91
CSNK2B-207ENST00000475875 PXDNLA1KZ92 1463 aa20.72■□□□□ 0.91
CSNK2B-207ENST00000475875 TOGARAM1Q9Y4F4 1720 aa20.71■□□□□ 0.91
CSNK2B-207ENST00000475875 AMIGO3Q86WK7 504 aa20.71■□□□□ 0.91
CSNK2B-207ENST00000475875 HOXC9P31274 260 aa20.7■□□□□ 0.9
CSNK2B-207ENST00000475875 UBR3Q6ZT12 1888 aa20.7■□□□□ 0.9
CSNK2B-207ENST00000475875 PHF14O94880 888 aa20.69■□□□□ 0.9
CSNK2B-207ENST00000475875 SLC34A2O95436 690 aa20.69■□□□□ 0.9
CSNK2B-207ENST00000475875 BCS1LQ9Y276 419 aa20.69■□□□□ 0.9
CSNK2B-207ENST00000475875 ARHGAP27Q6ZUM4 889 aa20.68■□□□□ 0.9
CSNK2B-207ENST00000475875 RAPGEF4Q8WZA2 1011 aa20.68■□□□□ 0.9
CSNK2B-207ENST00000475875 TERF2IPQ9NYB0 399 aa20.68■□□□□ 0.9
CSNK2B-207ENST00000475875 MAP3K19Q56UN5 1328 aa20.68■□□□□ 0.9
CSNK2B-207ENST00000475875 KDM2BQ8NHM5 1336 aa20.68■□□□□ 0.9
CSNK2B-207ENST00000475875 PCDH11XQ9BZA7 1347 aa20.68■□□□□ 0.9
CSNK2B-207ENST00000475875 PCDH11YQ9BZA8 1340 aa20.68■□□□□ 0.9
CSNK2B-207ENST00000475875 KIF13BQ9NQT8 1826 aa20.67■□□□□ 0.9
CSNK2B-207ENST00000475875 AMPHP49418 695 aa20.67■□□□□ 0.9
CSNK2B-207ENST00000475875 ROCK2O75116 1388 aaKnown RBP20.67■□□□□ 0.9
CSNK2B-207ENST00000475875 MPRIPQ6WCQ1 1025 aa20.66■□□□□ 0.9
CSNK2B-207ENST00000475875 RTL1A6NKG5 1358 aa20.66■□□□□ 0.9
CSNK2B-207ENST00000475875 MMP10P09238 476 aa20.65■□□□□ 0.9
CSNK2B-207ENST00000475875 TMC1Q8TDI8 760 aa20.65■□□□□ 0.9
CSNK2B-207ENST00000475875 KIAA1551Q9HCM1 1747 aa20.64■□□□□ 0.9
CSNK2B-207ENST00000475875 A0A1W2PP64 1363 aa20.64■□□□□ 0.89
CSNK2B-207ENST00000475875 TATP17735 454 aaPredicted RBP20.64■□□□□ 0.89
CSNK2B-207ENST00000475875 C9orf131Q5VYM1 1079 aa20.64■□□□□ 0.89
CSNK2B-207ENST00000475875 SMC1BQ8NDV3 1235 aa20.64■□□□□ 0.89
CSNK2B-207ENST00000475875 HSPA1AP0DMV8 641 aaKnown RBP20.63■□□□□ 0.89
CSNK2B-207ENST00000475875 HSPA1BP0DMV9 641 aaKnown RBP20.63■□□□□ 0.89
CSNK2B-207ENST00000475875 NBPF6Q5VWK0 638 aa20.63■□□□□ 0.89
CSNK2B-207ENST00000475875 NBPF4Q96M43 638 aa20.63■□□□□ 0.89
CSNK2B-207ENST00000475875 SLC12A5Q9H2X9 1139 aa20.63■□□□□ 0.89
CSNK2B-207ENST00000475875 FCHSD2O94868 740 aa20.62■□□□□ 0.89
CSNK2B-207ENST00000475875 COG3Q96JB2 828 aa20.62■□□□□ 0.89
CSNK2B-207ENST00000475875 PUS7Q96PZ0 661 aaKnown RBP20.62■□□□□ 0.89
CSNK2B-207ENST00000475875 SMG6Q86US8 1419 aaKnown RBP20.61■□□□□ 0.89
CSNK2B-207ENST00000475875 A0A0G2JLW4 131 aa20.61■□□□□ 0.89
CSNK2B-207ENST00000475875 L3MBTL2Q969R5 705 aa20.61■□□□□ 0.89
CSNK2B-207ENST00000475875 RGPD2P0DJD1 1756 aa20.6■□□□□ 0.89
CSNK2B-207ENST00000475875 KCPQ6ZWJ8 1503 aa20.6■□□□□ 0.89
CSNK2B-207ENST00000475875 LOC102724428A0A0B4J2F2 783 aa20.6■□□□□ 0.89
CSNK2B-207ENST00000475875 SIK1P57059 783 aa20.6■□□□□ 0.89
CSNK2B-207ENST00000475875 SMIM5Q71RC9 77 aa20.6■□□□□ 0.89
CSNK2B-207ENST00000475875 NLGN1Q8N2Q7 840 aa20.6■□□□□ 0.89
CSNK2B-207ENST00000475875 LINC00116Q8NCU8 138 aa20.6■□□□□ 0.89
CSNK2B-207ENST00000475875 GNPATO15228 680 aa20.59■□□□□ 0.89
CSNK2B-207ENST00000475875 CCDC87Q9NVE4 849 aa20.59■□□□□ 0.89
CSNK2B-207ENST00000475875 TNRC6CQ9HCJ0 1690 aaKnown RBP20.58■□□□□ 0.89
CSNK2B-207ENST00000475875 DPEP1P16444 411 aa20.58■□□□□ 0.89
CSNK2B-207ENST00000475875 PIGBQ92521 554 aa20.58■□□□□ 0.89
CSNK2B-207ENST00000475875 N4BP2Q86UW6 1770 aaPredicted RBP20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms