RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 KIF24Q5T7B8 1368 aa21.74■■□□□ 1.07
CCM2-207ENST00000475551 FYB1O15117 783 aa21.74■■□□□ 1.07
CCM2-207ENST00000475551 ZGPATQ8N5A5 531 aaKnown RBP21.73■■□□□ 1.07
CCM2-207ENST00000475551 FAM135BQ49AJ0 1406 aa21.73■■□□□ 1.07
CCM2-207ENST00000475551 LRRC7Q96NW7 1537 aa21.72■■□□□ 1.07
CCM2-207ENST00000475551 MBD3O95983 291 aa21.72■■□□□ 1.07
CCM2-207ENST00000475551 SYCE3A1L190 88 aa21.72■■□□□ 1.07
CCM2-207ENST00000475551 A2ML1A8K2U0 1454 aa21.71■■□□□ 1.07
CCM2-207ENST00000475551 ZFYVE9O95405 1425 aa21.71■■□□□ 1.07
CCM2-207ENST00000475551 API5Q9BZZ5 524 aaKnown RBP21.71■■□□□ 1.07
CCM2-207ENST00000475551 NUTM2DQ5VT03 806 aaPredicted RBP21.7■■□□□ 1.06
CCM2-207ENST00000475551 CASC1Q6TDU7 716 aa21.7■■□□□ 1.06
CCM2-207ENST00000475551 TSPYL6Q8N831 410 aa21.7■■□□□ 1.06
CCM2-207ENST00000475551 IFT57Q9NWB7 429 aa21.69■■□□□ 1.06
CCM2-207ENST00000475551 TERF2IPQ9NYB0 399 aa21.69■■□□□ 1.06
CCM2-207ENST00000475551 UBR1Q8IWV7 1749 aa21.69■■□□□ 1.06
CCM2-207ENST00000475551 GNAI1P63096 354 aa21.69■■□□□ 1.06
CCM2-207ENST00000475551 PRKAR2BP31323 418 aa21.68■■□□□ 1.06
CCM2-207ENST00000475551 NFE2L2Q16236 605 aa21.68■■□□□ 1.06
CCM2-207ENST00000475551 NSFL1CQ9UNZ2 370 aaKnown RBP21.68■■□□□ 1.06
CCM2-207ENST00000475551 ATAD2Q6PL18 1390 aa21.68■■□□□ 1.06
CCM2-207ENST00000475551 KNDC1Q76NI1 1749 aa21.67■■□□□ 1.06
CCM2-207ENST00000475551 ZNF853P0CG23 659 aa21.67■■□□□ 1.06
CCM2-207ENST00000475551 CEP170BQ9Y4F5 1589 aaPredicted RBP21.66■■□□□ 1.06
CCM2-207ENST00000475551 CD163L1Q9NR16 1453 aa21.66■■□□□ 1.06
CCM2-207ENST00000475551 REC8O95072 547 aa21.66■■□□□ 1.06
CCM2-207ENST00000475551 KIAA2012Q0VF49 1180 aa21.66■■□□□ 1.06
CCM2-207ENST00000475551 VGFO15240 615 aaPredicted RBP21.66■■□□□ 1.06
CCM2-207ENST00000475551 SDSP20132 328 aa21.66■■□□□ 1.06
CCM2-207ENST00000475551 SRPK2P78362 688 aaKnown RBP21.66■■□□□ 1.06
CCM2-207ENST00000475551 NEXMIFQ5QGS0 1516 aa21.66■■□□□ 1.06
CCM2-207ENST00000475551 C16orf71Q8IYS4 520 aaPredicted RBP21.65■■□□□ 1.06
CCM2-207ENST00000475551 CCDC94Q9BW85 323 aaPredicted RBP21.65■■□□□ 1.06
CCM2-207ENST00000475551 SETD1BQ9UPS6 1966 aaKnown RBP21.65■■□□□ 1.06
CCM2-207ENST00000475551 MYRIPQ8NFW9 859 aa21.65■■□□□ 1.06
CCM2-207ENST00000475551 TWISTNBQ3B726 338 aaPredicted RBP21.64■■□□□ 1.05
CCM2-207ENST00000475551 TSPY26PQ9H489 355 aa21.64■■□□□ 1.05
CCM2-207ENST00000475551 SENP3Q9H4L4 574 aaPredicted RBP21.64■■□□□ 1.05
CCM2-207ENST00000475551 MBIPQ9NS73 344 aa21.64■■□□□ 1.05
CCM2-207ENST00000475551 ANKRD44Q8N8A2 993 aa21.64■■□□□ 1.05
CCM2-207ENST00000475551 BRD1O95696 1058 aa21.62■■□□□ 1.05
CCM2-207ENST00000475551 PTMAP06454 111 aaKnown RBP21.62■■□□□ 1.05
CCM2-207ENST00000475551 RNF214Q8ND24 703 aa21.62■■□□□ 1.05
CCM2-207ENST00000475551 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.62■■□□□ 1.05
CCM2-207ENST00000475551 RIMS2Q9UQ26 1411 aa21.62■■□□□ 1.05
CCM2-207ENST00000475551 UTP14CQ5TAP6 766 aaKnown RBP21.62■■□□□ 1.05
CCM2-207ENST00000475551 RPAP2Q8IXW5 612 aaPredicted RBP21.62■■□□□ 1.05
CCM2-207ENST00000475551 SYAP1Q96A49 352 aaPredicted RBP21.62■■□□□ 1.05
CCM2-207ENST00000475551 PRIMPOLQ96LW4 560 aa21.62■■□□□ 1.05
CCM2-207ENST00000475551 THUMPD2Q9BTF0 503 aaKnown RBP21.62■■□□□ 1.05
CCM2-207ENST00000475551 ZNF142P52746 1687 aaPredicted RBP21.61■■□□□ 1.05
CCM2-207ENST00000475551 ERC2O15083 957 aa21.61■■□□□ 1.05
CCM2-207ENST00000475551 MCM2P49736 904 aa21.61■■□□□ 1.05
CCM2-207ENST00000475551 SAFB2Q14151 953 aaKnown RBP eCLIP21.61■■□□□ 1.055e-8■■■□□ 18
CCM2-207ENST00000475551 CHAMP1Q96JM3 812 aa21.61■■□□□ 1.05
CCM2-207ENST00000475551 PHACTR3Q96KR7 559 aa21.61■■□□□ 1.05
CCM2-207ENST00000475551 ATP10DQ9P241 1426 aa21.61■■□□□ 1.05
CCM2-207ENST00000475551 ELL2O00472 640 aaPredicted RBP21.61■■□□□ 1.05
CCM2-207ENST00000475551 OTUD7AQ8TE49 926 aaPredicted RBP21.61■■□□□ 1.05
CCM2-207ENST00000475551 TMEM2Q9UHN6 1383 aa21.6■■□□□ 1.05
CCM2-207ENST00000475551 THEMISQ8N1K5 641 aaPredicted RBP21.6■■□□□ 1.05
CCM2-207ENST00000475551 HDGFL2Q7Z4V5 671 aaPredicted RBP21.59■■□□□ 1.05
CCM2-207ENST00000475551 TMX3Q96JJ7 454 aa21.59■■□□□ 1.05
CCM2-207ENST00000475551 GTF2F1P35269 517 aaKnown RBP eCLIP21.58■■□□□ 1.05
CCM2-207ENST00000475551 HMGN5P82970 282 aaKnown RBP21.58■■□□□ 1.05
CCM2-207ENST00000475551 UVSSAQ2YD98 709 aa21.58■■□□□ 1.05
CCM2-207ENST00000475551 C8orf58Q8NAV2 365 aa21.58■■□□□ 1.05
CCM2-207ENST00000475551 PHF14O94880 888 aa21.58■■□□□ 1.05
CCM2-207ENST00000475551 CUL4AQ13619 759 aa21.58■■□□□ 1.05
CCM2-207ENST00000475551 KIF20BQ96Q89 1820 aa21.58■■□□□ 1.04
CCM2-207ENST00000475551 PIBF1Q8WXW3 757 aa21.57■■□□□ 1.04
CCM2-207ENST00000475551 DMTNQ08495 405 aa21.57■■□□□ 1.04
CCM2-207ENST00000475551 CEP85Q6P2H3 762 aa21.57■■□□□ 1.04
CCM2-207ENST00000475551 FAM184AQ8NB25 1140 aa21.57■■□□□ 1.04
CCM2-207ENST00000475551 POLKQ9UBT6 870 aa21.57■■□□□ 1.04
CCM2-207ENST00000475551 LMOD3Q0VAK6 560 aa21.56■■□□□ 1.04
CCM2-207ENST00000475551 INTS4Q96HW7 963 aaKnown RBP21.56■■□□□ 1.04
CCM2-207ENST00000475551 LTKP29376 864 aa21.55■■□□□ 1.04
CCM2-207ENST00000475551 ARID3AQ99856 593 aa21.55■■□□□ 1.04
CCM2-207ENST00000475551 NEK4P51957 841 aa21.55■■□□□ 1.04
CCM2-207ENST00000475551 DNTTIP2Q5QJE6 756 aaKnown RBP21.55■■□□□ 1.04
CCM2-207ENST00000475551 FOXD4L5Q5VV16 416 aaPredicted RBP21.55■■□□□ 1.04
CCM2-207ENST00000475551 FOXD4L4Q8WXT5 416 aaPredicted RBP21.55■■□□□ 1.04
CCM2-207ENST00000475551 SLIT1O75093 1534 aa21.54■■□□□ 1.04
CCM2-207ENST00000475551 HMOX1P09601 288 aa21.54■■□□□ 1.04
CCM2-207ENST00000475551 TXNDC2Q86VQ3 553 aa21.54■■□□□ 1.04
CCM2-207ENST00000475551 OSBPL3Q9H4L5 887 aa21.54■■□□□ 1.04
CCM2-207ENST00000475551 ARHGAP23Q9P227 1491 aa21.53■■□□□ 1.04
CCM2-207ENST00000475551 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.53■■□□□ 1.04
CCM2-207ENST00000475551 SMARCA5O60264 1052 aaPredicted RBP21.53■■□□□ 1.04
CCM2-207ENST00000475551 ZSCAN20P17040 1043 aaPredicted RBP21.53■■□□□ 1.04
CCM2-207ENST00000475551 NOLC1Q14978 699 aaKnown RBP eCLIP21.53■■□□□ 1.04
CCM2-207ENST00000475551 CPSF1Q10570 1443 aaKnown RBP21.52■■□□□ 1.04
CCM2-207ENST00000475551 HDGFP51858 240 aaKnown RBP21.52■■□□□ 1.04
CCM2-207ENST00000475551 ZNF710Q8N1W2 664 aa21.52■■□□□ 1.04
CCM2-207ENST00000475551 PRDM10Q9NQV6 1147 aa21.52■■□□□ 1.04
CCM2-207ENST00000475551 STK26Q9P289 416 aa21.52■■□□□ 1.04
CCM2-207ENST00000475551 RTL1A6NKG5 1358 aa21.52■■□□□ 1.03
CCM2-207ENST00000475551 EID1Q9Y6B2 187 aa21.51■■□□□ 1.03
CCM2-207ENST00000475551 RGS12O14924 1447 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms