RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 TMEM94Q12767 1356 aa19.55■□□□□ 0.72
RPUSD3-215ENST00000475470 MSH5O43196 834 aa19.54■□□□□ 0.72
RPUSD3-215ENST00000475470 KIF1AQ12756 1690 aa19.53■□□□□ 0.72
RPUSD3-215ENST00000475470 HTATSF1O43719 755 aaKnown RBP19.53■□□□□ 0.72
RPUSD3-215ENST00000475470 PLEKHG5O94827 1062 aa19.53■□□□□ 0.72
RPUSD3-215ENST00000475470 GCP02774 474 aa19.53■□□□□ 0.72
RPUSD3-215ENST00000475470 KIAA0232Q92628 1395 aa19.52■□□□□ 0.72
RPUSD3-215ENST00000475470 GNAT3A8MTJ3 354 aa19.52■□□□□ 0.71
RPUSD3-215ENST00000475470 USHBP1Q8N6Y0 703 aa19.52■□□□□ 0.71
RPUSD3-215ENST00000475470 ZBTB40Q9NUA8 1239 aa19.52■□□□□ 0.71
RPUSD3-215ENST00000475470 STRCP1A6NGW2 1772 aa19.51■□□□□ 0.71
RPUSD3-215ENST00000475470 KRT24Q2M2I5 525 aa19.51■□□□□ 0.71
RPUSD3-215ENST00000475470 FAM161AQ3B820 660 aa19.51■□□□□ 0.71
RPUSD3-215ENST00000475470 TSPYL4Q9UJ04 414 aa19.51■□□□□ 0.71
RPUSD3-215ENST00000475470 MIS18AQ9NYP9 233 aa19.5■□□□□ 0.71
RPUSD3-215ENST00000475470 NCOA3Q9Y6Q9 1424 aa19.5■□□□□ 0.71
RPUSD3-215ENST00000475470 TRPM3Q9HCF6 1732 aaPredicted RBP19.5■□□□□ 0.71
RPUSD3-215ENST00000475470 API5Q9BZZ5 524 aaKnown RBP19.5■□□□□ 0.71
RPUSD3-215ENST00000475470 CHMP4BQ9H444 224 aaKnown RBP19.5■□□□□ 0.71
RPUSD3-215ENST00000475470 SLIT3O75094 1523 aa19.49■□□□□ 0.71
RPUSD3-215ENST00000475470 NBPF6Q5VWK0 638 aa19.49■□□□□ 0.71
RPUSD3-215ENST00000475470 NPM2Q86SE8 214 aaKnown RBP19.49■□□□□ 0.71
RPUSD3-215ENST00000475470 NBPF4Q96M43 638 aa19.49■□□□□ 0.71
RPUSD3-215ENST00000475470 PHRF1Q9P1Y6 1649 aaKnown RBP19.49■□□□□ 0.71
RPUSD3-215ENST00000475470 DCCP43146 1447 aa19.49■□□□□ 0.71
RPUSD3-215ENST00000475470 MST1RQ04912 1400 aa19.49■□□□□ 0.71
RPUSD3-215ENST00000475470 HDAC1Q13547 482 aaPredicted RBP19.49■□□□□ 0.71
RPUSD3-215ENST00000475470 ARHGEF25Q86VW2 580 aa19.49■□□□□ 0.71
RPUSD3-215ENST00000475470 MAP3K5Q99683 1374 aa19.48■□□□□ 0.71
RPUSD3-215ENST00000475470 PDZRN3Q9UPQ7 1066 aa19.47■□□□□ 0.71
RPUSD3-215ENST00000475470 ABCC4O15439 1325 aa19.47■□□□□ 0.71
RPUSD3-215ENST00000475470 USP19O94966 1318 aa19.47■□□□□ 0.71
RPUSD3-215ENST00000475470 CADPS2Q86UW7 1296 aa19.47■□□□□ 0.71
RPUSD3-215ENST00000475470 ZBTB7BO15156 539 aaPredicted RBP19.45■□□□□ 0.7
RPUSD3-215ENST00000475470 C8orf34Q49A92 452 aa19.45■□□□□ 0.7
RPUSD3-215ENST00000475470 IPO9Q96P70 1041 aaKnown RBP19.45■□□□□ 0.7
RPUSD3-215ENST00000475470 ERICH6Q7L0X2 663 aa19.45■□□□□ 0.7
RPUSD3-215ENST00000475470 MSH6P52701 1360 aa19.45■□□□□ 0.7
RPUSD3-215ENST00000475470 IL17REQ8NFR9 667 aa19.44■□□□□ 0.7
RPUSD3-215ENST00000475470 LRRC59Q96AG4 307 aaKnown RBP19.44■□□□□ 0.7
RPUSD3-215ENST00000475470 LRRC37A3O60309 1634 aa19.43■□□□□ 0.7
RPUSD3-215ENST00000475470 ANKRD24Q8TF21 1146 aa19.42■□□□□ 0.7
RPUSD3-215ENST00000475470 DDX17Q92841 729 aaKnown RBP19.42■□□□□ 0.7
RPUSD3-215ENST00000475470 KDM4FA0A1W2PPD8 638 aa19.42■□□□□ 0.7
RPUSD3-215ENST00000475470 RGPD2P0DJD1 1756 aa19.42■□□□□ 0.7
RPUSD3-215ENST00000475470 TAF7Q15545 349 aaPredicted RBP19.41■□□□□ 0.7
RPUSD3-215ENST00000475470 ALS2Q96Q42 1657 aa19.41■□□□□ 0.7
RPUSD3-215ENST00000475470 PTPRCP08575 1304 aa19.41■□□□□ 0.7
RPUSD3-215ENST00000475470 NPHP3Q7Z494 1330 aa19.41■□□□□ 0.7
RPUSD3-215ENST00000475470 SLC4A2P04920 1241 aa19.41■□□□□ 0.7
RPUSD3-215ENST00000475470 BABAM1Q9NWV8 329 aa19.41■□□□□ 0.7
RPUSD3-215ENST00000475470 ZC3H6P61129 1189 aaKnown RBP19.4■□□□□ 0.7
RPUSD3-215ENST00000475470 SMC5Q8IY18 1101 aa19.4■□□□□ 0.7
RPUSD3-215ENST00000475470 PLEKHO1Q53GL0 409 aaPredicted RBP19.39■□□□□ 0.69
RPUSD3-215ENST00000475470 AXIN2Q9Y2T1 843 aa19.39■□□□□ 0.69
RPUSD3-215ENST00000475470 LMTK3Q96Q04 1460 aa19.39■□□□□ 0.69
RPUSD3-215ENST00000475470 NOP58Q9Y2X3 529 aaKnown RBP19.39■□□□□ 0.69
RPUSD3-215ENST00000475470 INTS3Q68E01 1043 aaKnown RBP19.38■□□□□ 0.69
RPUSD3-215ENST00000475470 C1orf115Q9H7X2 142 aa19.38■□□□□ 0.69
RPUSD3-215ENST00000475470 AMOTQ4VCS5 1084 aa19.37■□□□□ 0.69
RPUSD3-215ENST00000475470 ZBTB47Q9UFB7 747 aaPredicted RBP19.37■□□□□ 0.69
RPUSD3-215ENST00000475470 MED1Q15648 1581 aaPredicted RBP19.37■□□□□ 0.69
RPUSD3-215ENST00000475470 STK31Q9BXU1 1019 aa19.37■□□□□ 0.69
RPUSD3-215ENST00000475470 ZNF530Q6P9A1 599 aaPredicted RBP19.36■□□□□ 0.69
RPUSD3-215ENST00000475470 CEMIPQ8WUJ3 1361 aa19.36■□□□□ 0.69
RPUSD3-215ENST00000475470 AKAP4Q5JQC9 854 aa19.36■□□□□ 0.69
RPUSD3-215ENST00000475470 RGS12O14924 1447 aa19.36■□□□□ 0.69
RPUSD3-215ENST00000475470 STRCQ7RTU9 1775 aa19.36■□□□□ 0.69
RPUSD3-215ENST00000475470 NCAPD2Q15021 1401 aa19.35■□□□□ 0.69
RPUSD3-215ENST00000475470 SOS1Q07889 1333 aaPredicted RBP19.35■□□□□ 0.69
RPUSD3-215ENST00000475470 CCDC30Q5VVM6 783 aa19.35■□□□□ 0.69
RPUSD3-215ENST00000475470 LGR6Q9HBX8 967 aa19.34■□□□□ 0.69
RPUSD3-215ENST00000475470 TNS3Q68CZ2 1445 aa19.34■□□□□ 0.69
RPUSD3-215ENST00000475470 C1orf141Q5JVX7 400 aa19.34■□□□□ 0.69
RPUSD3-215ENST00000475470 XIRP1Q702N8 1843 aaKnown RBP19.34■□□□□ 0.69
RPUSD3-215ENST00000475470 RGPD5Q99666 1765 aa19.33■□□□□ 0.69
RPUSD3-215ENST00000475470 VIRMAQ69YN4 1812 aaKnown RBP19.33■□□□□ 0.69
RPUSD3-215ENST00000475470 ERBB3P21860 1342 aa19.33■□□□□ 0.69
RPUSD3-215ENST00000475470 NUCB1Q02818 461 aa19.33■□□□□ 0.68
RPUSD3-215ENST00000475470 G2E3Q7L622 706 aa19.33■□□□□ 0.68
RPUSD3-215ENST00000475470 GCC1Q96CN9 775 aa19.33■□□□□ 0.68
RPUSD3-215ENST00000475470 TEFQ10587 303 aa19.32■□□□□ 0.68
RPUSD3-215ENST00000475470 LMO7Q8WWI1 1683 aa19.32■□□□□ 0.68
RPUSD3-215ENST00000475470 CABLES1Q8TDN4 633 aa19.32■□□□□ 0.68
RPUSD3-215ENST00000475470 CAMTA1Q9Y6Y1 1673 aa19.31■□□□□ 0.68
RPUSD3-215ENST00000475470 MPRIPQ6WCQ1 1025 aa19.31■□□□□ 0.68
RPUSD3-215ENST00000475470 NECTIN2Q92692 538 aa19.31■□□□□ 0.68
RPUSD3-215ENST00000475470 DDRGK1Q96HY6 314 aa19.31■□□□□ 0.68
RPUSD3-215ENST00000475470 SPATA31A3Q5VYP0 1347 aa19.31■□□□□ 0.68
RPUSD3-215ENST00000475470 PXDNQ92626 1479 aa19.31■□□□□ 0.68
RPUSD3-215ENST00000475470 SIRT2Q8IXJ6 389 aa19.31■□□□□ 0.68
RPUSD3-215ENST00000475470 ZNF335Q9H4Z2 1342 aaPredicted RBP19.3■□□□□ 0.68
RPUSD3-215ENST00000475470 BRINP3Q76B58 766 aa19.3■□□□□ 0.68
RPUSD3-215ENST00000475470 CHD1LQ86WJ1 897 aa19.3■□□□□ 0.68
RPUSD3-215ENST00000475470 SLC4A10Q6U841 1118 aa19.3■□□□□ 0.68
RPUSD3-215ENST00000475470 NLRP2Q9NX02 1062 aa19.3■□□□□ 0.68
RPUSD3-215ENST00000475470 LNPKQ9C0E8 428 aa19.29■□□□□ 0.68
RPUSD3-215ENST00000475470 CCT4P50991 539 aaKnown RBP19.29■□□□□ 0.68
RPUSD3-215ENST00000475470 BTBD11A6QL63 1104 aa19.28■□□□□ 0.68
RPUSD3-215ENST00000475470 F6X3S4 739 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms