RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 CFAP44Q96MT7 982 aa16.14■□□□□ 0.17
CCNL1-216ENST00000475298 ZBTB7BO15156 539 aaPredicted RBP16.14■□□□□ 0.17
CCNL1-216ENST00000475298 DDIT3P35638 169 aa16.14■□□□□ 0.17
CCNL1-216ENST00000475298 BRPF1P55201 1214 aaPredicted RBP16.14■□□□□ 0.17
CCNL1-216ENST00000475298 PTPRUQ92729 1446 aa16.13■□□□□ 0.17
CCNL1-216ENST00000475298 CCDC173Q0VFZ6 552 aa16.13■□□□□ 0.17
CCNL1-216ENST00000475298 ZNF428Q96B54 188 aa16.13■□□□□ 0.17
CCNL1-216ENST00000475298 NRKQ7Z2Y5 1582 aa16.13■□□□□ 0.17
CCNL1-216ENST00000475298 KRT24Q2M2I5 525 aa16.13■□□□□ 0.17
CCNL1-216ENST00000475298 HSP90AB2PQ58FF8 381 aa16.13■□□□□ 0.17
CCNL1-216ENST00000475298 ZHX1Q9UKY1 873 aaPredicted RBP16.13■□□□□ 0.17
CCNL1-216ENST00000475298 PTCH1Q13635 1447 aa16.12■□□□□ 0.17
CCNL1-216ENST00000475298 NUCB1Q02818 461 aa16.12■□□□□ 0.17
CCNL1-216ENST00000475298 PDE4CQ08493 712 aa16.12■□□□□ 0.17
CCNL1-216ENST00000475298 PLEKHG1Q9ULL1 1385 aa16.12■□□□□ 0.17
CCNL1-216ENST00000475298 LMOD3Q0VAK6 560 aa16.12■□□□□ 0.17
CCNL1-216ENST00000475298 NCOA3Q9Y6Q9 1424 aa16.12■□□□□ 0.17
CCNL1-216ENST00000475298 R3HCC1Q9Y3T6 440 aaKnown RBP16.11■□□□□ 0.17
CCNL1-216ENST00000475298 TOPAZ1Q8N9V7 1692 aa16.11■□□□□ 0.17
CCNL1-216ENST00000475298 PEAK1Q9H792 1746 aa16.11■□□□□ 0.17
CCNL1-216ENST00000475298 OVOS2A0A0J9YW53 1432 aa16.11■□□□□ 0.17
CCNL1-216ENST00000475298 OVOS2Q6IE36 1432 aa16.11■□□□□ 0.17
CCNL1-216ENST00000475298 MCM10Q7L590 875 aa16.11■□□□□ 0.17
CCNL1-216ENST00000475298 USP6P35125 1406 aa16.1■□□□□ 0.17
CCNL1-216ENST00000475298 CHD1LQ86WJ1 897 aa16.1■□□□□ 0.17
CCNL1-216ENST00000475298 ARHGAP45Q92619 1136 aa16.1■□□□□ 0.17
CCNL1-216ENST00000475298 ABCC4O15439 1325 aa16.1■□□□□ 0.17
CCNL1-216ENST00000475298 PLEKHG3A1L390 1219 aa16.09■□□□□ 0.17
CCNL1-216ENST00000475298 SIRT2Q8IXJ6 389 aa16.09■□□□□ 0.17
CCNL1-216ENST00000475298 C22orf23Q9BZE7 217 aa16.09■□□□□ 0.17
CCNL1-216ENST00000475298 PRDM10Q9NQV6 1147 aa16.09■□□□□ 0.17
CCNL1-216ENST00000475298 PIK3R4Q99570 1358 aa16.09■□□□□ 0.17
CCNL1-216ENST00000475298 ILDR1Q86SU0 546 aaPredicted RBP16.09■□□□□ 0.17
CCNL1-216ENST00000475298 ANKRD45Q5TZF3 282 aa16.08■□□□□ 0.17
CCNL1-216ENST00000475298 TNPO1Q92973 898 aaKnown RBP16.08■□□□□ 0.17
CCNL1-216ENST00000475298 AMOTL2Q9Y2J4 779 aa16.08■□□□□ 0.17
CCNL1-216ENST00000475298 MSNP26038 577 aaKnown RBP16.08■□□□□ 0.16
CCNL1-216ENST00000475298 UTP14CQ5TAP6 766 aaKnown RBP16.08■□□□□ 0.16
CCNL1-216ENST00000475298 DMTNQ08495 405 aa16.07■□□□□ 0.16
CCNL1-216ENST00000475298 UQCRHLA0A096LP55 91 aa16.07■□□□□ 0.16
CCNL1-216ENST00000475298 UQCRHP07919 91 aa16.07■□□□□ 0.16
CCNL1-216ENST00000475298 NASPP49321 788 aaPredicted RBP16.07■□□□□ 0.16
CCNL1-216ENST00000475298 EID1Q9Y6B2 187 aa16.06■□□□□ 0.16
CCNL1-216ENST00000475298 ARID3AQ99856 593 aa16.06■□□□□ 0.16
CCNL1-216ENST00000475298 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.06■□□□□ 0.16
CCNL1-216ENST00000475298 FOXO3O43524 673 aa16.05■□□□□ 0.16
CCNL1-216ENST00000475298 MTERF4Q7Z6M4 381 aaKnown RBP16.05■□□□□ 0.16
CCNL1-216ENST00000475298 MIS18AQ9NYP9 233 aa16.05■□□□□ 0.16
CCNL1-216ENST00000475298 NALCNQ8IZF0 1738 aa16.05■□□□□ 0.16
CCNL1-216ENST00000475298 RGPD8O14715 1765 aaPredicted RBP16.05■□□□□ 0.16
CCNL1-216ENST00000475298 RIMS1Q86UR5 1692 aaKnown RBP16.05■□□□□ 0.16
CCNL1-216ENST00000475298 ZNF500O60304 480 aaPredicted RBP16.05■□□□□ 0.16
CCNL1-216ENST00000475298 ZSCAN20P17040 1043 aaPredicted RBP16.05■□□□□ 0.16
CCNL1-216ENST00000475298 MAP3K19Q56UN5 1328 aa16.05■□□□□ 0.16
CCNL1-216ENST00000475298 SKOR2Q2VWA4 1001 aaPredicted RBP16.04■□□□□ 0.16
CCNL1-216ENST00000475298 API5Q9BZZ5 524 aaKnown RBP16.04■□□□□ 0.16
CCNL1-216ENST00000475298 SSH2Q76I76 1423 aa16.04■□□□□ 0.16
CCNL1-216ENST00000475298 DYNC1I1O14576 645 aa16.04■□□□□ 0.16
CCNL1-216ENST00000475298 USP31Q70CQ4 1352 aa16.03■□□□□ 0.16
CCNL1-216ENST00000475298 CHL1O00533 1208 aa16.03■□□□□ 0.16
CCNL1-216ENST00000475298 GCC1Q96CN9 775 aa16.03■□□□□ 0.16
CCNL1-216ENST00000475298 RGPD1P0DJD0 1748 aa16.03■□□□□ 0.16
CCNL1-216ENST00000475298 NGDNQ8NEJ9 315 aaKnown RBP16.02■□□□□ 0.16
CCNL1-216ENST00000475298 GTF2E1P29083 439 aaPredicted RBP16.02■□□□□ 0.15
CCNL1-216ENST00000475298 RAB3GAP1Q15042 981 aa16.02■□□□□ 0.15
CCNL1-216ENST00000475298 HSCBQ8IWL3 235 aa16.02■□□□□ 0.15
CCNL1-216ENST00000475298 NOL7Q9UMY1 257 aaKnown RBP16.02■□□□□ 0.15
CCNL1-216ENST00000475298 XPCQ01831 940 aaPredicted RBP16.01■□□□□ 0.15
CCNL1-216ENST00000475298 HS1BP3Q53T59 392 aa16.01■□□□□ 0.15
CCNL1-216ENST00000475298 CHMP4BQ9H444 224 aaKnown RBP16.01■□□□□ 0.15
CCNL1-216ENST00000475298 NUTM2GQ5VZR2 741 aa16.01■□□□□ 0.15
CCNL1-216ENST00000475298 GBP4Q96PP9 640 aa16.01■□□□□ 0.15
CCNL1-216ENST00000475298 RGS12O14924 1447 aa16■□□□□ 0.15
CCNL1-216ENST00000475298 MTHFSDQ2M296 383 aaKnown RBP16■□□□□ 0.15
CCNL1-216ENST00000475298 BMP2KLQ5H9B9 411 aa16■□□□□ 0.15
CCNL1-216ENST00000475298 BBXQ8WY36 941 aaPredicted RBP16■□□□□ 0.15
CCNL1-216ENST00000475298 DIP2AQ14689 1571 aa16■□□□□ 0.15
CCNL1-216ENST00000475298 CCDC94Q9BW85 323 aaPredicted RBP16■□□□□ 0.15
CCNL1-216ENST00000475298 IBTKQ9P2D0 1353 aaPredicted RBP15.99■□□□□ 0.15
CCNL1-216ENST00000475298 KDM4FA0A1W2PPD8 638 aa15.99■□□□□ 0.15
CCNL1-216ENST00000475298 CIZ1Q9ULV3 898 aaPredicted RBP15.99■□□□□ 0.15
CCNL1-216ENST00000475298 TBX22Q9Y458 520 aa15.99■□□□□ 0.15
CCNL1-216ENST00000475298 SLIT1O75093 1534 aa15.99■□□□□ 0.15
CCNL1-216ENST00000475298 ARHGAP23Q9P227 1491 aa15.99■□□□□ 0.15
CCNL1-216ENST00000475298 CRB1P82279 1406 aa15.99■□□□□ 0.15
CCNL1-216ENST00000475298 FMN2Q9NZ56 1722 aa15.99■□□□□ 0.15
CCNL1-216ENST00000475298 AMPHP49418 695 aa15.98■□□□□ 0.15
CCNL1-216ENST00000475298 CEP170BQ9Y4F5 1589 aaPredicted RBP15.98■□□□□ 0.15
CCNL1-216ENST00000475298 TTC21AQ8NDW8 1320 aa15.98■□□□□ 0.15
CCNL1-216ENST00000475298 INTS3Q68E01 1043 aaKnown RBP15.98■□□□□ 0.15
CCNL1-216ENST00000475298 ANP32BQ92688 251 aaKnown RBP15.98■□□□□ 0.15
CCNL1-216ENST00000475298 EYA1Q99502 592 aa15.98■□□□□ 0.15
CCNL1-216ENST00000475298 MSH6P52701 1360 aa15.97■□□□□ 0.15
CCNL1-216ENST00000475298 PDLIM2Q96JY6 352 aa15.97■□□□□ 0.15
CCNL1-216ENST00000475298 BCL11BQ9C0K0 894 aaPredicted RBP15.97■□□□□ 0.15
CCNL1-216ENST00000475298 PIK3C2AO00443 1686 aa15.97■□□□□ 0.15
CCNL1-216ENST00000475298 ARHGEF10O15013 1369 aa15.97■□□□□ 0.15
CCNL1-216ENST00000475298 FLT4P35916 1363 aa15.97■□□□□ 0.15
CCNL1-216ENST00000475298 KCNA6P17658 529 aa15.97■□□□□ 0.15
CCNL1-216ENST00000475298 PTMSP20962 102 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms