RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 WDR33Q9C0J8 1336 aaKnown RBP12.94□□□□□ -0.34
VAPB-204ENST00000475243 CHMP4BP1P59074 171 aa12.94□□□□□ -0.34
VAPB-204ENST00000475243 SPATA32Q96LK8 384 aa12.93□□□□□ -0.34
VAPB-204ENST00000475243 CASKIN1Q8WXD9 1431 aa12.93□□□□□ -0.34
VAPB-204ENST00000475243 PLCD4Q9BRC7 762 aa12.93□□□□□ -0.34
VAPB-204ENST00000475243 ERBINQ96RT1 1412 aa12.93□□□□□ -0.34
VAPB-204ENST00000475243 CASTP20810 708 aaKnown RBP12.93□□□□□ -0.34
VAPB-204ENST00000475243 MCM10Q7L590 875 aa12.93□□□□□ -0.34
VAPB-204ENST00000475243 CCDC191Q8NCU4 936 aa12.93□□□□□ -0.34
VAPB-204ENST00000475243 WDR63Q8IWG1 891 aa12.93□□□□□ -0.34
VAPB-204ENST00000475243 ERLIN2O94905 339 aa12.92□□□□□ -0.34
VAPB-204ENST00000475243 FAM193AP78312 1265 aa12.92□□□□□ -0.34
VAPB-204ENST00000475243 CCP110O43303 1012 aa12.92□□□□□ -0.34
VAPB-204ENST00000475243 ANKLE2Q86XL3 938 aa12.92□□□□□ -0.34
VAPB-204ENST00000475243 SMARCA5O60264 1052 aaPredicted RBP12.92□□□□□ -0.34
VAPB-204ENST00000475243 NOL7Q9UMY1 257 aaKnown RBP12.92□□□□□ -0.34
VAPB-204ENST00000475243 MINDY4BA8MYZ0 360 aa12.92□□□□□ -0.34
VAPB-204ENST00000475243 PIP4K2AP48426 406 aaPredicted RBP12.92□□□□□ -0.34
VAPB-204ENST00000475243 CCDC184Q52MB2 194 aa12.92□□□□□ -0.34
VAPB-204ENST00000475243 TMEM57Q8N5G2 664 aa12.92□□□□□ -0.34
VAPB-204ENST00000475243 GNAT3A8MTJ3 354 aa12.92□□□□□ -0.34
VAPB-204ENST00000475243 METTL24Q5JXM2 366 aa12.91□□□□□ -0.34
VAPB-204ENST00000475243 USHBP1Q8N6Y0 703 aa12.91□□□□□ -0.34
VAPB-204ENST00000475243 DACH1Q9UI36 760 aa12.91□□□□□ -0.34
VAPB-204ENST00000475243 IGHMBP2P38935 993 aaKnown RBP12.91□□□□□ -0.34
VAPB-204ENST00000475243 ENOX2Q16206 610 aaKnown RBP12.91□□□□□ -0.34
VAPB-204ENST00000475243 CAMK4Q16566 473 aa12.91□□□□□ -0.34
VAPB-204ENST00000475243 WAPLQ7Z5K2 1190 aa12.91□□□□□ -0.34
VAPB-204ENST00000475243 LRRFIP2Q9Y608 721 aaKnown RBP12.91□□□□□ -0.34
VAPB-204ENST00000475243 TAX1BP1Q86VP1 789 aa12.91□□□□□ -0.34
VAPB-204ENST00000475243 GOLGA6L10A6NI86 522 aa12.9□□□□□ -0.34
VAPB-204ENST00000475243 SSR1P43307 286 aaKnown RBP12.9□□□□□ -0.34
VAPB-204ENST00000475243 FILIP1Q7Z7B0 1213 aa12.9□□□□□ -0.34
VAPB-204ENST00000475243 AIDAQ96BJ3 306 aa12.9□□□□□ -0.34
VAPB-204ENST00000475243 CWC15Q9P013 229 aaKnown RBP12.9□□□□□ -0.34
VAPB-204ENST00000475243 DHX8Q14562 1220 aaKnown RBP12.9□□□□□ -0.34
VAPB-204ENST00000475243 BOLA2Q9H3K6 86 aa12.9□□□□□ -0.34
VAPB-204ENST00000475243 LUC7LQ9NQ29 371 aaKnown RBP12.9□□□□□ -0.34
VAPB-204ENST00000475243 CEP57L1Q8IYX8 460 aa12.89□□□□□ -0.35
VAPB-204ENST00000475243 CCDC82Q8N4S0 544 aa12.89□□□□□ -0.35
VAPB-204ENST00000475243 CFAP45Q9UL16 551 aa12.89□□□□□ -0.35
VAPB-204ENST00000475243 TMPOP42166 694 aaKnown RBP12.89□□□□□ -0.35
VAPB-204ENST00000475243 LEKR1Q6ZMV7 388 aa12.89□□□□□ -0.35
VAPB-204ENST00000475243 BMP2KQ9NSY1 1161 aaPredicted RBP12.89□□□□□ -0.35
VAPB-204ENST00000475243 SUPT6HQ7KZ85 1726 aaKnown RBP12.89□□□□□ -0.35
VAPB-204ENST00000475243 CDKL5O76039 1030 aa12.89□□□□□ -0.35
VAPB-204ENST00000475243 STARD3NLO95772 234 aa12.89□□□□□ -0.35
VAPB-204ENST00000475243 KIAA1107Q9UPP5 1409 aa12.89□□□□□ -0.35
VAPB-204ENST00000475243 NUDT16Q96DE0 195 aaKnown RBP12.89□□□□□ -0.35
VAPB-204ENST00000475243 BACH2Q9BYV9 841 aa12.89□□□□□ -0.35
VAPB-204ENST00000475243 CTNNA3Q9UI47 895 aa12.89□□□□□ -0.35
VAPB-204ENST00000475243 DUSP27Q5VZP5 1158 aa12.88□□□□□ -0.35
VAPB-204ENST00000475243 IMMTQ16891 758 aaKnown RBP12.88□□□□□ -0.35
VAPB-204ENST00000475243 GUCY1B3Q02153 619 aa12.88□□□□□ -0.35
VAPB-204ENST00000475243 NSD3Q9BZ95 1437 aa12.88□□□□□ -0.35
VAPB-204ENST00000475243 MPRIPQ6WCQ1 1025 aa12.88□□□□□ -0.35
VAPB-204ENST00000475243 ANKIB1Q9P2G1 1089 aa12.88□□□□□ -0.35
VAPB-204ENST00000475243 GRIN2BQ13224 1484 aa12.88□□□□□ -0.35
VAPB-204ENST00000475243 MYD88Q99836 296 aa12.88□□□□□ -0.35
VAPB-204ENST00000475243 FERMT3Q86UX7 667 aa12.88□□□□□ -0.35
VAPB-204ENST00000475243 IL27Q8NEV9 243 aa12.88□□□□□ -0.35
VAPB-204ENST00000475243 GRPEL1Q9HAV7 217 aa12.88□□□□□ -0.35
VAPB-204ENST00000475243 NUP62CLQ9H1M0 184 aa12.87□□□□□ -0.35
VAPB-204ENST00000475243 POLR3DP05423 398 aaPredicted RBP12.87□□□□□ -0.35
VAPB-204ENST00000475243 KIAA1328Q86T90 577 aa12.87□□□□□ -0.35
VAPB-204ENST00000475243 CCDC83Q8IWF9 413 aa12.87□□□□□ -0.35
VAPB-204ENST00000475243 ADAMTS2O95450 1211 aa12.87□□□□□ -0.35
VAPB-204ENST00000475243 NFE2L2Q16236 605 aa12.87□□□□□ -0.35
VAPB-204ENST00000475243 SLC52A1Q9NWF4 448 aa12.87□□□□□ -0.35
VAPB-204ENST00000475243 CALRP27797 417 aaKnown RBP12.87□□□□□ -0.35
VAPB-204ENST00000475243 EIF5P55010 431 aaKnown RBP12.87□□□□□ -0.35
VAPB-204ENST00000475243 MKNK2Q9HBH9 465 aa12.87□□□□□ -0.35
VAPB-204ENST00000475243 LARP6Q9BRS8 491 aaKnown RBP12.87□□□□□ -0.35
VAPB-204ENST00000475243 UPF3BQ9BZI7 483 aaKnown RBP12.87□□□□□ -0.35
VAPB-204ENST00000475243 ERICH3Q5RHP9 1530 aa12.87□□□□□ -0.35
VAPB-204ENST00000475243 ZPR1O75312 459 aa12.86□□□□□ -0.35
VAPB-204ENST00000475243 TAF3Q5VWG9 929 aa12.86□□□□□ -0.35
VAPB-204ENST00000475243 ZNF219Q9P2Y4 722 aaPredicted RBP12.86□□□□□ -0.35
VAPB-204ENST00000475243 KLHL10Q6JEL2 608 aa12.86□□□□□ -0.35
VAPB-204ENST00000475243 HFM1A2PYH4 1435 aa12.86□□□□□ -0.35
VAPB-204ENST00000475243 ARAP1Q96P48 1450 aa12.86□□□□□ -0.35
VAPB-204ENST00000475243 CCDC112Q8NEF3 446 aa12.86□□□□□ -0.35
VAPB-204ENST00000475243 WDR97A6NE52 1622 aa12.86□□□□□ -0.35
VAPB-204ENST00000475243 SKAP1Q86WV1 359 aa12.85□□□□□ -0.35
VAPB-204ENST00000475243 CBFA2T2O43439 604 aa12.85□□□□□ -0.35
VAPB-204ENST00000475243 FCHSD2O94868 740 aa12.85□□□□□ -0.35
VAPB-204ENST00000475243 MYCNP04198 464 aaPredicted RBP12.85□□□□□ -0.35
VAPB-204ENST00000475243 ZRSR2Q15696 482 aaKnown RBP12.85□□□□□ -0.35
VAPB-204ENST00000475243 TMOD3Q9NYL9 352 aa12.85□□□□□ -0.35
VAPB-204ENST00000475243 SYCE3A1L190 88 aa12.85□□□□□ -0.35
VAPB-204ENST00000475243 CFAP100Q494V2 611 aa12.85□□□□□ -0.35
VAPB-204ENST00000475243 F6X3S4 739 aa12.85□□□□□ -0.35
VAPB-204ENST00000475243 CRACR2BQ8N4Y2 399 aaPredicted RBP12.85□□□□□ -0.35
VAPB-204ENST00000475243 KRT32Q14532 448 aa12.84□□□□□ -0.35
VAPB-204ENST00000475243 SLC4A8Q2Y0W8 1093 aa12.84□□□□□ -0.35
VAPB-204ENST00000475243 SEC63Q9UGP8 760 aaKnown RBP12.84□□□□□ -0.35
VAPB-204ENST00000475243 CCDC8Q9H0W5 538 aaPredicted RBP12.84□□□□□ -0.35
VAPB-204ENST00000475243 CAVIN4Q5BKX8 364 aa12.84□□□□□ -0.35
VAPB-204ENST00000475243 TRMT1LQ7Z2T5 733 aaKnown RBP12.84□□□□□ -0.35
VAPB-204ENST00000475243 PRPF40BQ6NWY9 871 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms