RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 NSD2O96028 1365 aa15.77■□□□□ 0.11
HLA-DOB-208ENST00000475235 HSP90AB2PQ58FF8 381 aa15.77■□□□□ 0.11
HLA-DOB-208ENST00000475235 NBPF14Q5TI25 921 aa15.75■□□□□ 0.11
HLA-DOB-208ENST00000475235 NBPF6Q5VWK0 638 aa15.75■□□□□ 0.11
HLA-DOB-208ENST00000475235 NBPF4Q96M43 638 aa15.75■□□□□ 0.11
HLA-DOB-208ENST00000475235 EMILIN1Q9Y6C2 1016 aa15.75■□□□□ 0.11
HLA-DOB-208ENST00000475235 PPM1GO15355 546 aaPredicted RBP15.74■□□□□ 0.11
HLA-DOB-208ENST00000475235 KIF7Q2M1P5 1343 aa15.74■□□□□ 0.11
HLA-DOB-208ENST00000475235 WASHC2AQ641Q2 1341 aa15.74■□□□□ 0.11
HLA-DOB-208ENST00000475235 PSDA5PKW4 1024 aaPredicted RBP15.73■□□□□ 0.11
HLA-DOB-208ENST00000475235 RAPGEF4Q8WZA2 1011 aa15.73■□□□□ 0.11
HLA-DOB-208ENST00000475235 RNF39Q9H2S5 420 aa15.73■□□□□ 0.11
HLA-DOB-208ENST00000475235 KNSTRNQ9Y448 316 aa15.73■□□□□ 0.11
HLA-DOB-208ENST00000475235 R3HDM1Q15032 1099 aaKnown RBP15.73■□□□□ 0.11
HLA-DOB-208ENST00000475235 DDX54Q8TDD1 881 aaKnown RBP15.73■□□□□ 0.11
HLA-DOB-208ENST00000475235 ZCRB1Q8TBF4 217 aaKnown RBP15.72■□□□□ 0.11
HLA-DOB-208ENST00000475235 POLKQ9UBT6 870 aa15.72■□□□□ 0.11
HLA-DOB-208ENST00000475235 TATP17735 454 aaPredicted RBP15.71■□□□□ 0.11
HLA-DOB-208ENST00000475235 PTF1AQ7RTS3 328 aa15.71■□□□□ 0.11
HLA-DOB-208ENST00000475235 MEGF6O75095 1541 aa15.71■□□□□ 0.1
HLA-DOB-208ENST00000475235 KCNQ2O43526 872 aa15.7■□□□□ 0.1
HLA-DOB-208ENST00000475235 TNNT2P45379 298 aaPredicted RBP15.7■□□□□ 0.1
HLA-DOB-208ENST00000475235 USHBP1Q8N6Y0 703 aa15.7■□□□□ 0.1
HLA-DOB-208ENST00000475235 ACSBG1Q96GR2 724 aa15.7■□□□□ 0.1
HLA-DOB-208ENST00000475235 RREB1Q92766 1687 aa15.69■□□□□ 0.1
HLA-DOB-208ENST00000475235 MORC1Q86VD1 984 aa15.69■□□□□ 0.1
HLA-DOB-208ENST00000475235 KLHL34Q8N239 644 aa15.69■□□□□ 0.1
HLA-DOB-208ENST00000475235 RGPD3A6NKT7 1758 aaPredicted RBP15.69■□□□□ 0.1
HLA-DOB-208ENST00000475235 RGPD4Q7Z3J3 1758 aa15.69■□□□□ 0.1
HLA-DOB-208ENST00000475235 TXNRD1Q16881 649 aa15.68■□□□□ 0.1
HLA-DOB-208ENST00000475235 NHSQ6T4R5 1651 aa15.67■□□□□ 0.1
HLA-DOB-208ENST00000475235 ANKRD26Q9UPS8 1709 aa15.67■□□□□ 0.1
HLA-DOB-208ENST00000475235 SBF2Q86WG5 1849 aa15.67■□□□□ 0.1
HLA-DOB-208ENST00000475235 NCAPD2Q15021 1401 aa15.66■□□□□ 0.1
HLA-DOB-208ENST00000475235 SRCAPQ6ZRS2 3230 aa15.66■□□□□ 0.1
HLA-DOB-208ENST00000475235 PCDH11XQ9BZA7 1347 aa15.66■□□□□ 0.1
HLA-DOB-208ENST00000475235 PCDH11YQ9BZA8 1340 aa15.66■□□□□ 0.1
HLA-DOB-208ENST00000475235 PROM2Q8N271 834 aa15.66■□□□□ 0.1
HLA-DOB-208ENST00000475235 NUP188Q5SRE5 1749 aa15.66■□□□□ 0.1
HLA-DOB-208ENST00000475235 EYA1Q99502 592 aa15.65■□□□□ 0.1
HLA-DOB-208ENST00000475235 EIF4A2Q14240 407 aaKnown RBP15.64■□□□□ 0.09
HLA-DOB-208ENST00000475235 SYTL4Q96C24 671 aaPredicted RBP15.64■□□□□ 0.09
HLA-DOB-208ENST00000475235 PLEKHG2Q9H7P9 1386 aa15.64■□□□□ 0.09
HLA-DOB-208ENST00000475235 FOXD4L1Q9NU39 408 aa15.63■□□□□ 0.09
HLA-DOB-208ENST00000475235 SPG7Q9UQ90 795 aa15.63■□□□□ 0.09
HLA-DOB-208ENST00000475235 LRP5O75197 1615 aa15.63■□□□□ 0.09
HLA-DOB-208ENST00000475235 PER1O15534 1290 aaPredicted RBP15.63■□□□□ 0.09
HLA-DOB-208ENST00000475235 PRIM1P49642 420 aaKnown RBP15.63■□□□□ 0.09
HLA-DOB-208ENST00000475235 ANP32EQ9BTT0 268 aa15.63■□□□□ 0.09
HLA-DOB-208ENST00000475235 STK32BQ9NY57 414 aa15.63■□□□□ 0.09
HLA-DOB-208ENST00000475235 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.63■□□□□ 0.09
HLA-DOB-208ENST00000475235 RGPD2P0DJD1 1756 aa15.62■□□□□ 0.09
HLA-DOB-208ENST00000475235 ANO8Q9HCE9 1232 aaPredicted RBP15.62■□□□□ 0.09
HLA-DOB-208ENST00000475235 U3KPZ7 1027 aaPredicted RBP15.62■□□□□ 0.09
HLA-DOB-208ENST00000475235 SLC27A3Q5K4L6 730 aa15.61■□□□□ 0.09
HLA-DOB-208ENST00000475235 IGSF1Q8N6C5 1336 aa15.61■□□□□ 0.09
HLA-DOB-208ENST00000475235 CYP27B1O15528 508 aa15.6■□□□□ 0.09
HLA-DOB-208ENST00000475235 SLC15A2Q16348 729 aa15.6■□□□□ 0.09
HLA-DOB-208ENST00000475235 ZBTB22O15209 634 aa15.59■□□□□ 0.09
HLA-DOB-208ENST00000475235 NPC1L1Q9UHC9 1359 aa15.59■□□□□ 0.09
HLA-DOB-208ENST00000475235 SHANK3Q9BYB0 1731 aa15.59■□□□□ 0.09
HLA-DOB-208ENST00000475235 MAP2P11137 1827 aaKnown RBP15.58■□□□□ 0.09
HLA-DOB-208ENST00000475235 HMGB2P26583 209 aaKnown RBP15.58■□□□□ 0.08
HLA-DOB-208ENST00000475235 NKX1-1Q15270 411 aaPredicted RBP15.58■□□□□ 0.08
HLA-DOB-208ENST00000475235 CC2D1BQ5T0F9 858 aaKnown RBP15.58■□□□□ 0.08
HLA-DOB-208ENST00000475235 SPON1Q9HCB6 807 aa15.58■□□□□ 0.08
HLA-DOB-208ENST00000475235 IFNL2Q8IZJ0 200 aa15.57■□□□□ 0.08
HLA-DOB-208ENST00000475235 BTAF1O14981 1849 aa15.57■□□□□ 0.08
HLA-DOB-208ENST00000475235 DOT1LQ8TEK3 1739 aa15.56■□□□□ 0.08
HLA-DOB-208ENST00000475235 LRRC4BQ9NT99 713 aa15.56■□□□□ 0.08
HLA-DOB-208ENST00000475235 PKD1L3Q7Z443 1732 aa15.55■□□□□ 0.08
HLA-DOB-208ENST00000475235 PHKG2P15735 406 aa15.55■□□□□ 0.08
HLA-DOB-208ENST00000475235 MTHFSP49914 203 aa15.55■□□□□ 0.08
HLA-DOB-208ENST00000475235 IL13P35225 146 aa15.54■□□□□ 0.08
HLA-DOB-208ENST00000475235 AMOTQ4VCS5 1084 aa15.54■□□□□ 0.08
HLA-DOB-208ENST00000475235 PLEKHO1Q53GL0 409 aaPredicted RBP15.54■□□□□ 0.08
HLA-DOB-208ENST00000475235 MPRIPQ6WCQ1 1025 aa15.54■□□□□ 0.08
HLA-DOB-208ENST00000475235 HSP90AB1P08238 724 aaKnown RBP15.53■□□□□ 0.08
HLA-DOB-208ENST00000475235 C1QBPQ07021 282 aaKnown RBP15.53■□□□□ 0.08
HLA-DOB-208ENST00000475235 SMARCC1Q92922 1105 aaPredicted RBP15.53■□□□□ 0.08
HLA-DOB-208ENST00000475235 CCNL1Q9UK58 526 aaPredicted RBP15.53■□□□□ 0.08
HLA-DOB-208ENST00000475235 PAPPAQ13219 1627 aa15.53■□□□□ 0.08
HLA-DOB-208ENST00000475235 SULT6B1Q6IMI4 303 aa15.53■□□□□ 0.08
HLA-DOB-208ENST00000475235 KDRP35968 1356 aa15.52■□□□□ 0.08
HLA-DOB-208ENST00000475235 ZNF827Q17R98 1081 aa15.52■□□□□ 0.07
HLA-DOB-208ENST00000475235 AKT1S1Q96B36 256 aa15.52■□□□□ 0.07
HLA-DOB-208ENST00000475235 PPP1R1BQ9UD71 204 aaPredicted RBP15.52■□□□□ 0.07
HLA-DOB-208ENST00000475235 PALLDQ8WX93 1383 aa15.51■□□□□ 0.07
HLA-DOB-208ENST00000475235 TULP1O00294 542 aaPredicted RBP15.51■□□□□ 0.07
HLA-DOB-208ENST00000475235 DIAPH1O60610 1272 aaKnown RBP15.51■□□□□ 0.07
HLA-DOB-208ENST00000475235 NEFLP07196 543 aa15.51■□□□□ 0.07
HLA-DOB-208ENST00000475235 AEBP1Q8IUX7 1158 aa15.51■□□□□ 0.07
HLA-DOB-208ENST00000475235 MTFR1LQ9H019 292 aa15.51■□□□□ 0.07
HLA-DOB-208ENST00000475235 TMOD3Q9NYL9 352 aa15.51■□□□□ 0.07
HLA-DOB-208ENST00000475235 ZBTB7AO95365 584 aa15.5■□□□□ 0.07
HLA-DOB-208ENST00000475235 PIGBQ92521 554 aa15.5■□□□□ 0.07
HLA-DOB-208ENST00000475235 DCAF5Q96JK2 942 aa15.5■□□□□ 0.07
HLA-DOB-208ENST00000475235 PDGFDQ9GZP0 370 aaPredicted RBP15.5■□□□□ 0.07
HLA-DOB-208ENST00000475235 ZNF530Q6P9A1 599 aaPredicted RBP15.49■□□□□ 0.07
HLA-DOB-208ENST00000475235 TFCP2L1Q9NZI6 479 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms