RNA–Protein interactions for RNA: ENST00000475158.1

CDH23-211, Transcript of cadherin related 23, humanhuman

TSL 1 (best)

Gene CDH23, Length 4,114 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-211ENST00000475158 JAKMIP1Q96N16 626 aaKnown RBP11.53□□□□□ -0.56
CDH23-211ENST00000475158 NINLQ9Y2I6 1382 aa11.53□□□□□ -0.56
CDH23-211ENST00000475158 CBX1P83916 185 aa11.53□□□□□ -0.56
CDH23-211ENST00000475158 TSPYL6Q8N831 410 aa11.53□□□□□ -0.56
CDH23-211ENST00000475158 BOLA2Q9H3K6 86 aa11.53□□□□□ -0.56
CDH23-211ENST00000475158 SYCP2Q9BX26 1530 aa11.53□□□□□ -0.56
CDH23-211ENST00000475158 IFT57Q9NWB7 429 aa11.53□□□□□ -0.56
CDH23-211ENST00000475158 PRAG1Q86YV5 1406 aa11.52□□□□□ -0.56
CDH23-211ENST00000475158 CCDC8Q9H0W5 538 aaPredicted RBP11.52□□□□□ -0.56
CDH23-211ENST00000475158 GDPD2Q9HCC8 539 aa11.52□□□□□ -0.56
CDH23-211ENST00000475158 RRAGDQ9NQL2 400 aaPredicted RBP11.52□□□□□ -0.56
CDH23-211ENST00000475158 ACEP12821 1306 aa11.52□□□□□ -0.56
CDH23-211ENST00000475158 C8orf58Q8NAV2 365 aa11.52□□□□□ -0.57
CDH23-211ENST00000475158 DDX11Q96FC9 970 aa11.52□□□□□ -0.57
CDH23-211ENST00000475158 PHACTR3Q96KR7 559 aa11.52□□□□□ -0.57
CDH23-211ENST00000475158 MEIS3Q99687 375 aa11.52□□□□□ -0.57
CDH23-211ENST00000475158 CNNM1Q9NRU3 951 aa11.52□□□□□ -0.57
CDH23-211ENST00000475158 CYP46A1Q9Y6A2 500 aa11.52□□□□□ -0.57
CDH23-211ENST00000475158 CGNQ9P2M7 1197 aaKnown RBP11.51□□□□□ -0.57
CDH23-211ENST00000475158 SEC24BO95487 1268 aa11.51□□□□□ -0.57
CDH23-211ENST00000475158 MX1P20591 662 aa11.51□□□□□ -0.57
CDH23-211ENST00000475158 SSFA2P28290 1259 aa11.51□□□□□ -0.57
CDH23-211ENST00000475158 FLIIQ13045 1269 aa11.51□□□□□ -0.57
CDH23-211ENST00000475158 HOMER1Q86YM7 354 aa11.51□□□□□ -0.57
CDH23-211ENST00000475158 PARD3Q8TEW0 1356 aa11.5□□□□□ -0.57
CDH23-211ENST00000475158 PSMA5P28066 241 aa11.5□□□□□ -0.57
CDH23-211ENST00000475158 TBC1D9Q6ZT07 1266 aa11.5□□□□□ -0.57
CDH23-211ENST00000475158 C16orf71Q8IYS4 520 aaPredicted RBP11.5□□□□□ -0.57
CDH23-211ENST00000475158 TRIM5Q9C035 493 aa11.5□□□□□ -0.57
CDH23-211ENST00000475158 PHF8Q9UPP1 1060 aa11.5□□□□□ -0.57
CDH23-211ENST00000475158 LARP1BQ659C4 914 aaKnown RBP11.5□□□□□ -0.57
CDH23-211ENST00000475158 SPG7Q9UQ90 795 aa11.5□□□□□ -0.57
CDH23-211ENST00000475158 KDM5BQ9UGL1 1544 aa11.5□□□□□ -0.57
CDH23-211ENST00000475158 PANK2Q9BZ23 570 aa11.5□□□□□ -0.57
CDH23-211ENST00000475158 CASTP20810 708 aaKnown RBP11.5□□□□□ -0.57
CDH23-211ENST00000475158 PIP4K2AP48426 406 aaPredicted RBP11.5□□□□□ -0.57
CDH23-211ENST00000475158 CHRNA2Q15822 529 aa11.5□□□□□ -0.57
CDH23-211ENST00000475158 RAPGEF6Q8TEU7 1601 aa11.49□□□□□ -0.57
CDH23-211ENST00000475158 ERICH2A1L162 156 aa11.49□□□□□ -0.57
CDH23-211ENST00000475158 CLCN1P35523 988 aa11.49□□□□□ -0.57
CDH23-211ENST00000475158 ALDH1L2Q3SY69 923 aa11.49□□□□□ -0.57
CDH23-211ENST00000475158 FAM135AQ9P2D6 1515 aa11.49□□□□□ -0.57
CDH23-211ENST00000475158 BLOC1S2Q6QNY1 142 aa11.49□□□□□ -0.57
CDH23-211ENST00000475158 POLKQ9UBT6 870 aa11.49□□□□□ -0.57
CDH23-211ENST00000475158 RALGAPBQ86X10 1494 aa11.49□□□□□ -0.57
CDH23-211ENST00000475158 PI4KAP2A4QPH2 592 aa11.49□□□□□ -0.57
CDH23-211ENST00000475158 PRPF40BQ6NWY9 871 aaKnown RBP11.49□□□□□ -0.57
CDH23-211ENST00000475158 CCDC83Q8IWF9 413 aa11.49□□□□□ -0.57
CDH23-211ENST00000475158 PI4KAP1Q8N8J0 262 aa11.49□□□□□ -0.57
CDH23-211ENST00000475158 CFAP65Q6ZU64 1925 aaKnown RBP11.48□□□□□ -0.57
CDH23-211ENST00000475158 SYCE3A1L190 88 aa11.48□□□□□ -0.57
CDH23-211ENST00000475158 MBD3O95983 291 aa11.48□□□□□ -0.57
CDH23-211ENST00000475158 ATP5J2-PTCD1G3V325 749 aa11.48□□□□□ -0.57
CDH23-211ENST00000475158 TPM3P06753 285 aa11.48□□□□□ -0.57
CDH23-211ENST00000475158 MCM2P49736 904 aa11.48□□□□□ -0.57
CDH23-211ENST00000475158 MYD88Q99836 296 aa11.48□□□□□ -0.57
CDH23-211ENST00000475158 CCDC57Q2TAC2 916 aa11.47□□□□□ -0.57
CDH23-211ENST00000475158 ERC1Q8IUD2 1116 aa11.47□□□□□ -0.57
CDH23-211ENST00000475158 BICDL1Q6ZP65 573 aa11.47□□□□□ -0.57
CDH23-211ENST00000475158 PLCH2O75038 1416 aa11.47□□□□□ -0.57
CDH23-211ENST00000475158 SAFBQ15424 915 aaKnown RBP eCLIP11.47□□□□□ -0.57
CDH23-211ENST00000475158 TTC39AQ5SRH9 613 aa11.47□□□□□ -0.57
CDH23-211ENST00000475158 KIF6Q6ZMV9 814 aa11.47□□□□□ -0.57
CDH23-211ENST00000475158 TNPO1Q92973 898 aaKnown RBP11.47□□□□□ -0.57
CDH23-211ENST00000475158 PCMTD1Q96MG8 357 aaPredicted RBP11.47□□□□□ -0.57
CDH23-211ENST00000475158 CEP126Q9P2H0 1117 aa11.47□□□□□ -0.57
CDH23-211ENST00000475158 C8orf34Q49A92 452 aa11.46□□□□□ -0.57
CDH23-211ENST00000475158 KIF1BPQ96EK5 621 aa11.46□□□□□ -0.57
CDH23-211ENST00000475158 TCEANC2Q96MN5 208 aa11.46□□□□□ -0.57
CDH23-211ENST00000475158 TRERF1Q96PN7 1200 aa11.46□□□□□ -0.57
CDH23-211ENST00000475158 NOL10Q9BSC4 688 aaKnown RBP11.46□□□□□ -0.57
CDH23-211ENST00000475158 TSPY26PQ9H489 355 aa11.46□□□□□ -0.57
CDH23-211ENST00000475158 PDRG1Q9NUG6 133 aa11.46□□□□□ -0.57
CDH23-211ENST00000475158 IDH1O75874 414 aaKnown RBP11.46□□□□□ -0.57
CDH23-211ENST00000475158 PIBF1Q8WXW3 757 aa11.46□□□□□ -0.57
CDH23-211ENST00000475158 TBC1D2BQ9UPU7 963 aa11.46□□□□□ -0.57
CDH23-211ENST00000475158 PZPP20742 1482 aa11.46□□□□□ -0.57
CDH23-211ENST00000475158 CCDC66A2RUB6 948 aa11.46□□□□□ -0.58
CDH23-211ENST00000475158 KINO60870 393 aaKnown RBP11.46□□□□□ -0.58
CDH23-211ENST00000475158 PDCP20941 246 aa11.46□□□□□ -0.58
CDH23-211ENST00000475158 ME1P48163 572 aa11.46□□□□□ -0.58
CDH23-211ENST00000475158 CCDC158Q5M9N0 1113 aa11.46□□□□□ -0.58
CDH23-211ENST00000475158 ZBTB3Q9H5J0 574 aa11.46□□□□□ -0.58
CDH23-211ENST00000475158 ABCC11Q96J66 1382 aa11.46□□□□□ -0.58
CDH23-211ENST00000475158 XRCC6P12956 609 aaKnown RBP eCLIP11.45□□□□□ -0.58
CDH23-211ENST00000475158 TTLL5Q6EMB2 1281 aa11.45□□□□□ -0.58
CDH23-211ENST00000475158 ZSCAN30Q86W11 494 aa11.45□□□□□ -0.58
CDH23-211ENST00000475158 DNAAF4Q8WXU2 420 aa11.45□□□□□ -0.58
CDH23-211ENST00000475158 DENND4BO75064 1496 aaPredicted RBP11.45□□□□□ -0.58
CDH23-211ENST00000475158 GUCY1B3Q02153 619 aa11.45□□□□□ -0.58
CDH23-211ENST00000475158 CCDC173Q0VFZ6 552 aa11.45□□□□□ -0.58
CDH23-211ENST00000475158 SLC39A6Q13433 755 aa11.45□□□□□ -0.58
CDH23-211ENST00000475158 CAMK4Q16566 473 aa11.45□□□□□ -0.58
CDH23-211ENST00000475158 NOC3LQ8WTT2 800 aaKnown RBP11.45□□□□□ -0.58
CDH23-211ENST00000475158 TBC1D32Q96NH3 1257 aa11.45□□□□□ -0.58
CDH23-211ENST00000475158 WDR33Q9C0J8 1336 aaKnown RBP11.45□□□□□ -0.58
CDH23-211ENST00000475158 STK38Q15208 465 aa11.45□□□□□ -0.58
CDH23-211ENST00000475158 PPP1R42Q7Z4L9 355 aa11.45□□□□□ -0.58
CDH23-211ENST00000475158 DTNBO60941 627 aa11.45□□□□□ -0.58
CDH23-211ENST00000475158 CCDC82Q8N4S0 544 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms