RNA–Protein interactions for RNA: ENST00000474725.5

EDEM3-206, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 2

Gene EDEM3, Length 1,911 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-206ENST00000474725 JCADQ9P266 1359 aa26.39■■□□□ 1.82
EDEM3-206ENST00000474725 GNAT3A8MTJ3 354 aa26.39■■□□□ 1.81
EDEM3-206ENST00000474725 AMOTQ4VCS5 1084 aa26.39■■□□□ 1.81
EDEM3-206ENST00000474725 LARP1Q6PKG0 1096 aaKnown RBP26.39■■□□□ 1.81
EDEM3-206ENST00000474725 RAPGEF4Q8WZA2 1011 aa26.39■■□□□ 1.81
EDEM3-206ENST00000474725 RTF1Q92541 710 aaKnown RBP26.39■■□□□ 1.81
EDEM3-206ENST00000474725 LAS1LQ9Y4W2 734 aaKnown RBP26.39■■□□□ 1.81
EDEM3-206ENST00000474725 FANCIQ9NVI1 1328 aa26.39■■□□□ 1.81
EDEM3-206ENST00000474725 HTATSF1O43719 755 aaKnown RBP26.37■■□□□ 1.81
EDEM3-206ENST00000474725 MAP3K5Q99683 1374 aa26.37■■□□□ 1.81
EDEM3-206ENST00000474725 TATP17735 454 aaPredicted RBP26.37■■□□□ 1.81
EDEM3-206ENST00000474725 IFT57Q9NWB7 429 aa26.36■■□□□ 1.81
EDEM3-206ENST00000474725 ZNF853P0CG23 659 aa26.35■■□□□ 1.81
EDEM3-206ENST00000474725 ZNF530Q6P9A1 599 aaPredicted RBP26.35■■□□□ 1.81
EDEM3-206ENST00000474725 CARD10Q9BWT7 1032 aa26.35■■□□□ 1.81
EDEM3-206ENST00000474725 MEGF6O75095 1541 aa26.35■■□□□ 1.81
EDEM3-206ENST00000474725 HSPA1LP34931 641 aa26.35■■□□□ 1.81
EDEM3-206ENST00000474725 GNAI1P63096 354 aa26.35■■□□□ 1.81
EDEM3-206ENST00000474725 RNF123Q5XPI4 1314 aa26.34■■□□□ 1.81
EDEM3-206ENST00000474725 CFAP44Q96MT7 982 aa26.33■■□□□ 1.81
EDEM3-206ENST00000474725 CRB1P82279 1406 aa26.32■■□□□ 1.8
EDEM3-206ENST00000474725 NEFLP07196 543 aa26.32■■□□□ 1.8
EDEM3-206ENST00000474725 AKAP4Q5JQC9 854 aa26.32■■□□□ 1.8
EDEM3-206ENST00000474725 IL17REQ8NFR9 667 aa26.32■■□□□ 1.8
EDEM3-206ENST00000474725 EXOSC9Q06265 439 aaKnown RBP26.31■■□□□ 1.8
EDEM3-206ENST00000474725 MBIPQ9NS73 344 aa26.31■■□□□ 1.8
EDEM3-206ENST00000474725 PLCH1Q4KWH8 1693 aa26.3■■□□□ 1.8
EDEM3-206ENST00000474725 FKBP8Q14318 412 aa26.29■■□□□ 1.8
EDEM3-206ENST00000474725 C1orf141Q5JVX7 400 aa26.29■■□□□ 1.8
EDEM3-206ENST00000474725 SPG7Q9UQ90 795 aa26.29■■□□□ 1.8
EDEM3-206ENST00000474725 IRX6P78412 446 aaPredicted RBP26.29■■□□□ 1.8
EDEM3-206ENST00000474725 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.29■■□□□ 1.84e-6■■□□□ 11.4
EDEM3-206ENST00000474725 PLEKHG2Q9H7P9 1386 aa26.28■■□□□ 1.8
EDEM3-206ENST00000474725 CHL1O00533 1208 aa26.27■■□□□ 1.8
EDEM3-206ENST00000474725 LGR6Q9HBX8 967 aa26.27■■□□□ 1.8
EDEM3-206ENST00000474725 USP35Q9P2H5 1018 aa26.27■■□□□ 1.8
EDEM3-206ENST00000474725 PELP1Q8IZL8 1130 aaKnown RBP26.27■■□□□ 1.8
EDEM3-206ENST00000474725 SPATA31A6Q5VVP1 1343 aa26.26■■□□□ 1.8
EDEM3-206ENST00000474725 OVOS2A0A0G2JMS6 1433 aa26.26■■□□□ 1.8
EDEM3-206ENST00000474725 LRRC37A3O60309 1634 aa26.26■■□□□ 1.8
EDEM3-206ENST00000474725 RRP1P56182 461 aaKnown RBP26.26■■□□□ 1.79
EDEM3-206ENST00000474725 MPRIPQ6WCQ1 1025 aa26.26■■□□□ 1.79
EDEM3-206ENST00000474725 IL2RBP14784 551 aa26.26■■□□□ 1.79
EDEM3-206ENST00000474725 CEMIPQ8WUJ3 1361 aa26.24■■□□□ 1.79
EDEM3-206ENST00000474725 MIS18AQ9NYP9 233 aa26.24■■□□□ 1.79
EDEM3-206ENST00000474725 PKD1L3Q7Z443 1732 aa26.24■■□□□ 1.79
EDEM3-206ENST00000474725 PARP4Q9UKK3 1724 aaKnown RBP26.24■■□□□ 1.79
EDEM3-206ENST00000474725 NRAPQ86VF7 1730 aa26.24■■□□□ 1.79
EDEM3-206ENST00000474725 SLIT2O94813 1529 aa26.23■■□□□ 1.79
EDEM3-206ENST00000474725 RNMTO43148 476 aaKnown RBP26.23■■□□□ 1.79
EDEM3-206ENST00000474725 CT47B1P0C2W7 299 aaPredicted RBP26.23■■□□□ 1.79
EDEM3-206ENST00000474725 PHKG2P15735 406 aa26.23■■□□□ 1.79
EDEM3-206ENST00000474725 BCAR3O75815 825 aa26.22■■□□□ 1.79
EDEM3-206ENST00000474725 RARSP54136 660 aaKnown RBP26.22■■□□□ 1.79
EDEM3-206ENST00000474725 IFNL2Q8IZJ0 200 aa26.22■■□□□ 1.79
EDEM3-206ENST00000474725 ZCRB1Q8TBF4 217 aaKnown RBP26.22■■□□□ 1.79
EDEM3-206ENST00000474725 C8orf37Q96NL8 207 aa26.22■■□□□ 1.79
EDEM3-206ENST00000474725 LRP6O75581 1613 aa26.21■■□□□ 1.79
EDEM3-206ENST00000474725 CYP27B1O15528 508 aa26.21■■□□□ 1.79
EDEM3-206ENST00000474725 TAF7Q15545 349 aaPredicted RBP26.21■■□□□ 1.79
EDEM3-206ENST00000474725 TSPYL4Q9UJ04 414 aa26.21■■□□□ 1.79
EDEM3-206ENST00000474725 PLIN1O60240 522 aa26.2■■□□□ 1.79
EDEM3-206ENST00000474725 NWD2Q9ULI1 1742 aa26.2■■□□□ 1.78
EDEM3-206ENST00000474725 NGLY1Q96IV0 654 aa26.2■■□□□ 1.78
EDEM3-206ENST00000474725 TSPYL6Q8N831 410 aa26.19■■□□□ 1.78
EDEM3-206ENST00000474725 C8orf58Q8NAV2 365 aa26.19■■□□□ 1.78
EDEM3-206ENST00000474725 ELL2O00472 640 aaPredicted RBP26.17■■□□□ 1.78
EDEM3-206ENST00000474725 TEFQ10587 303 aa26.17■■□□□ 1.78
EDEM3-206ENST00000474725 VIRMAQ69YN4 1812 aaKnown RBP26.16■■□□□ 1.78
EDEM3-206ENST00000474725 VAMP4O75379 141 aa26.16■■□□□ 1.78
EDEM3-206ENST00000474725 BABAM1Q9NWV8 329 aa26.16■■□□□ 1.78
EDEM3-206ENST00000474725 ADAMTS7Q9UKP4 1686 aa26.16■■□□□ 1.78
EDEM3-206ENST00000474725 DISP2A7MBM2 1401 aa26.16■■□□□ 1.78
EDEM3-206ENST00000474725 SPATA31A1Q5TZJ5 1347 aa26.16■■□□□ 1.78
EDEM3-206ENST00000474725 PCDH11XQ9BZA7 1347 aa26.16■■□□□ 1.78
EDEM3-206ENST00000474725 PCDH11YQ9BZA8 1340 aa26.16■■□□□ 1.78
EDEM3-206ENST00000474725 BCL2L13Q9BXK5 485 aa26.16■■□□□ 1.78
EDEM3-206ENST00000474725 KDM6AO15550 1401 aaPredicted RBP26.15■■□□□ 1.78
EDEM3-206ENST00000474725 KRT24Q2M2I5 525 aa26.15■■□□□ 1.78
EDEM3-206ENST00000474725 TWISTNBQ3B726 338 aaPredicted RBP26.15■■□□□ 1.78
EDEM3-206ENST00000474725 UNC5CLQ8IV45 518 aa26.15■■□□□ 1.78
EDEM3-206ENST00000474725 FNBP4Q8N3X1 1017 aaPredicted RBP26.14■■□□□ 1.77
EDEM3-206ENST00000474725 SPATA31A5Q5VU36 1347 aa26.13■■□□□ 1.77
EDEM3-206ENST00000474725 SPATA31A7Q8IWB4 1347 aa26.13■■□□□ 1.77
EDEM3-206ENST00000474725 HSP90AB1P08238 724 aaKnown RBP26.13■■□□□ 1.77
EDEM3-206ENST00000474725 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.13■■□□□ 1.77
EDEM3-206ENST00000474725 DCAF5Q96JK2 942 aa26.13■■□□□ 1.77
EDEM3-206ENST00000474725 BCL9LQ86UU0 1499 aa26.12■■□□□ 1.77
EDEM3-206ENST00000474725 DDX54Q8TDD1 881 aaKnown RBP26.12■■□□□ 1.77
EDEM3-206ENST00000474725 SSH1Q8WYL5 1049 aa26.12■■□□□ 1.77
EDEM3-206ENST00000474725 SHANK3Q9BYB0 1731 aa26.12■■□□□ 1.77
EDEM3-206ENST00000474725 CCDC9Q9Y3X0 531 aaKnown RBP26.12■■□□□ 1.77
EDEM3-206ENST00000474725 SCN11AQ9UI33 1791 aa26.12■■□□□ 1.77
EDEM3-206ENST00000474725 MEX3CQ5U5Q3 659 aaKnown RBP26.12■■□□□ 1.77
EDEM3-206ENST00000474725 THRAP3Q9Y2W1 955 aaKnown RBP26.12■■□□□ 1.77
EDEM3-206ENST00000474725 BTBD11A6QL63 1104 aa26.1■■□□□ 1.77
EDEM3-206ENST00000474725 ZNF428Q96B54 188 aa26.1■■□□□ 1.77
EDEM3-206ENST00000474725 SMC4Q9NTJ3 1288 aa26.1■■□□□ 1.77
EDEM3-206ENST00000474725 WNK3Q9BYP7 1800 aa26.08■■□□□ 1.77
EDEM3-206ENST00000474725 ALDH1L2Q3SY69 923 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms