RNA–Protein interactions for RNA: ENST00000474413.5

EFNA1-204, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,083 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-204ENST00000474413 BTAF1O14981 1849 aa24.65■■□□□ 1.54
EFNA1-204ENST00000474413 EIF4A2Q14240 407 aaKnown RBP24.64■■□□□ 1.54
EFNA1-204ENST00000474413 MORC1Q86VD1 984 aa24.64■■□□□ 1.54
EFNA1-204ENST00000474413 PARD3Q8TEW0 1356 aa24.64■■□□□ 1.53
EFNA1-204ENST00000474413 KCNQ2O43526 872 aa24.63■■□□□ 1.53
EFNA1-204ENST00000474413 NPC1L1Q9UHC9 1359 aa24.63■■□□□ 1.53
EFNA1-204ENST00000474413 TOGARAM1Q9Y4F4 1720 aa24.63■■□□□ 1.53
EFNA1-204ENST00000474413 EYA1Q99502 592 aa24.62■■□□□ 1.53
EFNA1-204ENST00000474413 BCL11BQ9C0K0 894 aaPredicted RBP24.62■■□□□ 1.53
EFNA1-204ENST00000474413 ACSBG1Q96GR2 724 aa24.59■■□□□ 1.53
EFNA1-204ENST00000474413 IGSF1Q8N6C5 1336 aa24.59■■□□□ 1.53
EFNA1-204ENST00000474413 ZCRB1Q8TBF4 217 aaKnown RBP24.58■■□□□ 1.53
EFNA1-204ENST00000474413 DDX54Q8TDD1 881 aaKnown RBP24.58■■□□□ 1.53
EFNA1-204ENST00000474413 COL3A1P02461 1466 aaPredicted RBP24.58■■□□□ 1.52
EFNA1-204ENST00000474413 CC2D1BQ5T0F9 858 aaKnown RBP24.57■■□□□ 1.52
EFNA1-204ENST00000474413 RAPGEF4Q8WZA2 1011 aa24.56■■□□□ 1.52
EFNA1-204ENST00000474413 PAPPAQ13219 1627 aa24.56■■□□□ 1.52
EFNA1-204ENST00000474413 PROM2Q8N271 834 aa24.55■■□□□ 1.52
EFNA1-204ENST00000474413 PLSCR1O15162 318 aa24.54■■□□□ 1.52
EFNA1-204ENST00000474413 TATP17735 454 aaPredicted RBP24.54■■□□□ 1.52
EFNA1-204ENST00000474413 CYP27B1O15528 508 aa24.53■■□□□ 1.52
EFNA1-204ENST00000474413 PSDA5PKW4 1024 aaPredicted RBP24.52■■□□□ 1.52
EFNA1-204ENST00000474413 IL13P35225 146 aa24.5■■□□□ 1.51
EFNA1-204ENST00000474413 AEBP1Q8IUX7 1158 aa24.5■■□□□ 1.51
EFNA1-204ENST00000474413 ANO8Q9HCE9 1232 aaPredicted RBP24.5■■□□□ 1.51
EFNA1-204ENST00000474413 PCDH11XQ9BZA7 1347 aa24.5■■□□□ 1.51
EFNA1-204ENST00000474413 PCDH11YQ9BZA8 1340 aa24.5■■□□□ 1.51
EFNA1-204ENST00000474413 LY75O60449 1722 aa24.49■■□□□ 1.51
EFNA1-204ENST00000474413 MTHFSP49914 203 aa24.49■■□□□ 1.51
EFNA1-204ENST00000474413 KDRP35968 1356 aa24.49■■□□□ 1.51
EFNA1-204ENST00000474413 LRP5O75197 1615 aa24.49■■□□□ 1.51
EFNA1-204ENST00000474413 ITGB4P16144 1822 aa24.48■■□□□ 1.51
EFNA1-204ENST00000474413 R3HDM1Q15032 1099 aaKnown RBP24.48■■□□□ 1.51
EFNA1-204ENST00000474413 PLEKHG2Q9H7P9 1386 aa24.48■■□□□ 1.51
EFNA1-204ENST00000474413 CNGB1Q14028 1251 aaPredicted RBP24.47■■□□□ 1.51
EFNA1-204ENST00000474413 PRIM1P49642 420 aaKnown RBP24.46■■□□□ 1.51
EFNA1-204ENST00000474413 CASZ1Q86V15 1759 aa24.46■■□□□ 1.51
EFNA1-204ENST00000474413 TXNRD1Q16881 649 aa24.45■■□□□ 1.5
EFNA1-204ENST00000474413 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.43■■□□□ 1.5
EFNA1-204ENST00000474413 KAT6BQ8WYB5 2073 aa24.42■■□□□ 1.5
EFNA1-204ENST00000474413 NKX1-1Q15270 411 aaPredicted RBP24.42■■□□□ 1.5
EFNA1-204ENST00000474413 LRRC4BQ9NT99 713 aa24.41■■□□□ 1.5
EFNA1-204ENST00000474413 PHKG2P15735 406 aa24.4■■□□□ 1.5
EFNA1-204ENST00000474413 KDM6AO15550 1401 aaPredicted RBP24.39■■□□□ 1.5
EFNA1-204ENST00000474413 SYTL4Q96C24 671 aaPredicted RBP24.39■■□□□ 1.49
EFNA1-204ENST00000474413 SPG7Q9UQ90 795 aa24.39■■□□□ 1.49
EFNA1-204ENST00000474413 TUBGCP6Q96RT7 1819 aa24.39■■□□□ 1.49
EFNA1-204ENST00000474413 SULT6B1Q6IMI4 303 aa24.38■■□□□ 1.49
EFNA1-204ENST00000474413 PPP2R1AP30153 589 aa24.35■■□□□ 1.49
EFNA1-204ENST00000474413 PDGFDQ9GZP0 370 aaPredicted RBP24.35■■□□□ 1.49
EFNA1-204ENST00000474413 KCNQ4P56696 695 aa24.34■■□□□ 1.49
EFNA1-204ENST00000474413 C5P01031 1676 aa24.34■■□□□ 1.49
EFNA1-204ENST00000474413 ADAMTS7Q9UKP4 1686 aa24.34■■□□□ 1.49
EFNA1-204ENST00000474413 QSER1Q2KHR3 1735 aa24.33■■□□□ 1.49
EFNA1-204ENST00000474413 DIAPH1O60610 1272 aaKnown RBP24.33■■□□□ 1.49
EFNA1-204ENST00000474413 ZNF827Q17R98 1081 aa24.33■■□□□ 1.49
EFNA1-204ENST00000474413 IFNL2Q8IZJ0 200 aa24.33■■□□□ 1.49
EFNA1-204ENST00000474413 TAF1LQ8IZX4 1826 aa24.33■■□□□ 1.48
EFNA1-204ENST00000474413 HMOX1P09601 288 aa24.32■■□□□ 1.48
EFNA1-204ENST00000474413 NBPF14Q5TI25 921 aa24.32■■□□□ 1.48
EFNA1-204ENST00000474413 PIGBQ92521 554 aa24.32■■□□□ 1.48
EFNA1-204ENST00000474413 SCN11AQ9UI33 1791 aa24.31■■□□□ 1.48
EFNA1-204ENST00000474413 PALLDQ8WX93 1383 aa24.3■■□□□ 1.48
EFNA1-204ENST00000474413 ZNF530Q6P9A1 599 aaPredicted RBP24.3■■□□□ 1.48
EFNA1-204ENST00000474413 MPRIPQ6WCQ1 1025 aa24.3■■□□□ 1.48
EFNA1-204ENST00000474413 PLEKHO1Q53GL0 409 aaPredicted RBP24.29■■□□□ 1.48
EFNA1-204ENST00000474413 VIRMAQ69YN4 1812 aaKnown RBP24.28■■□□□ 1.48
EFNA1-204ENST00000474413 MRC1P22897 1456 aa24.28■■□□□ 1.48
EFNA1-204ENST00000474413 SLC15A2Q16348 729 aa24.28■■□□□ 1.48
EFNA1-204ENST00000474413 SLC27A3Q5K4L6 730 aa24.28■■□□□ 1.48
EFNA1-204ENST00000474413 AKT1S1Q96B36 256 aa24.28■■□□□ 1.48
EFNA1-204ENST00000474413 AMOTQ4VCS5 1084 aa24.27■■□□□ 1.48
EFNA1-204ENST00000474413 DDX10Q13206 875 aaKnown RBP24.26■■□□□ 1.47
EFNA1-204ENST00000474413 STK32BQ9NY57 414 aa24.25■■□□□ 1.47
EFNA1-204ENST00000474413 DCAF5Q96JK2 942 aa24.24■■□□□ 1.47
EFNA1-204ENST00000474413 CCNL1Q9UK58 526 aaPredicted RBP24.24■■□□□ 1.47
EFNA1-204ENST00000474413 C4BP0C0L5 1744 aa24.24■■□□□ 1.47
EFNA1-204ENST00000474413 ASAP1Q9ULH1 1129 aa24.23■■□□□ 1.47
EFNA1-204ENST00000474413 ZNF831Q5JPB2 1677 aa24.23■■□□□ 1.47
EFNA1-204ENST00000474413 U2SURPO15042 1029 aaKnown RBP24.22■■□□□ 1.47
EFNA1-204ENST00000474413 ZEB1P37275 1124 aaPredicted RBP24.22■■□□□ 1.47
EFNA1-204ENST00000474413 MTHFSDQ2M296 383 aaKnown RBP24.22■■□□□ 1.47
EFNA1-204ENST00000474413 TMOD3Q9NYL9 352 aa24.22■■□□□ 1.47
EFNA1-204ENST00000474413 COL24A1Q17RW2 1714 aa24.21■■□□□ 1.47
EFNA1-204ENST00000474413 ATG3Q9NT62 314 aa24.21■■□□□ 1.47
EFNA1-204ENST00000474413 ERVV-2B6SEH9 535 aa24.2■■□□□ 1.46
EFNA1-204ENST00000474413 RSPH6AQ9H0K4 717 aa24.2■■□□□ 1.46
EFNA1-204ENST00000474413 COL5A3P25940 1745 aaPredicted RBP24.2■■□□□ 1.46
EFNA1-204ENST00000474413 CICQ96RK0 1608 aaPredicted RBP24.2■■□□□ 1.46
EFNA1-204ENST00000474413 PNPLA7Q6ZV29 1317 aa24.19■■□□□ 1.46
EFNA1-204ENST00000474413 HSP90AB1P08238 724 aaKnown RBP24.19■■□□□ 1.46
EFNA1-204ENST00000474413 C1orf141Q5JVX7 400 aa24.19■■□□□ 1.46
EFNA1-204ENST00000474413 UBR3Q6ZT12 1888 aa24.19■■□□□ 1.46
EFNA1-204ENST00000474413 AKAP4Q5JQC9 854 aa24.18■■□□□ 1.46
EFNA1-204ENST00000474413 CFAP53Q96M91 514 aa24.18■■□□□ 1.46
EFNA1-204ENST00000474413 SIPA1L3O60292 1781 aaPredicted RBP24.18■■□□□ 1.46
EFNA1-204ENST00000474413 TJP1Q07157 1748 aa24.18■■□□□ 1.46
EFNA1-204ENST00000474413 AMIGO3Q86WK7 504 aa24.17■■□□□ 1.46
EFNA1-204ENST00000474413 SMARCC1Q92922 1105 aaPredicted RBP24.17■■□□□ 1.46
EFNA1-204ENST00000474413 SLC4A9Q96Q91 983 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms