RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 PRR20BP86481 221 aa11.24□□□□□ -0.61
VPS50-211ENST00000474412 PRR20AP86496 221 aa11.24□□□□□ -0.61
VPS50-211ENST00000474412 CTDSPL2Q05D32 466 aa11.24□□□□□ -0.61
VPS50-211ENST00000474412 LINC01559Q495D7 138 aa11.23□□□□□ -0.61
VPS50-211ENST00000474412 PKD2L1Q9P0L9 805 aa11.23□□□□□ -0.61
VPS50-211ENST00000474412 PTPRMP28827 1452 aa11.23□□□□□ -0.61
VPS50-211ENST00000474412 ZNF518AQ6AHZ1 1483 aa11.23□□□□□ -0.61
VPS50-211ENST00000474412 RFC5P40937 340 aa11.22□□□□□ -0.61
VPS50-211ENST00000474412 Q6ZNB5 142 aa11.22□□□□□ -0.61
VPS50-211ENST00000474412 C3P01024 1663 aa11.21□□□□□ -0.61
VPS50-211ENST00000474412 REREQ9P2R6 1566 aa11.21□□□□□ -0.61
VPS50-211ENST00000474412 GPATCH8Q9UKJ3 1502 aaKnown RBP11.21□□□□□ -0.61
VPS50-211ENST00000474412 TRAPPC8Q9Y2L5 1435 aa11.21□□□□□ -0.61
VPS50-211ENST00000474412 WNT7AO00755 349 aa11.21□□□□□ -0.61
VPS50-211ENST00000474412 SKOR1P84550 965 aa11.21□□□□□ -0.61
VPS50-211ENST00000474412 MAGI2Q86UL8 1455 aa11.2□□□□□ -0.62
VPS50-211ENST00000474412 CYP4X1Q8N118 509 aa11.2□□□□□ -0.62
VPS50-211ENST00000474412 BAP1Q92560 729 aa11.2□□□□□ -0.62
VPS50-211ENST00000474412 C9orf84Q5VXU9 1444 aa11.19□□□□□ -0.62
VPS50-211ENST00000474412 RC3H1Q5TC82 1133 aaKnown RBP11.19□□□□□ -0.62
VPS50-211ENST00000474412 LRRN4Q8WUT4 740 aa11.19□□□□□ -0.62
VPS50-211ENST00000474412 PREX1Q8TCU6 1659 aa11.19□□□□□ -0.62
VPS50-211ENST00000474412 LOC105371045A0A1W2PR82 267 aa11.18□□□□□ -0.62
VPS50-211ENST00000474412 SH3BP2P78314 561 aa11.18□□□□□ -0.62
VPS50-211ENST00000474412 ZNF511Q8NB15 262 aa11.18□□□□□ -0.62
VPS50-211ENST00000474412 MRGPRX2Q96LB1 330 aa11.18□□□□□ -0.62
VPS50-211ENST00000474412 CDK11AQ9UQ88 783 aaPredicted RBP11.18□□□□□ -0.62
VPS50-211ENST00000474412 ATP7AQ04656 1500 aa11.18□□□□□ -0.62
VPS50-211ENST00000474412 PLXNC1O60486 1568 aa11.17□□□□□ -0.62
VPS50-211ENST00000474412 FAM187AA6NFU0 413 aa11.17□□□□□ -0.62
VPS50-211ENST00000474412 USP17L8P0C7I0 530 aa11.17□□□□□ -0.62
VPS50-211ENST00000474412 TMEM259Q4ZIN3 620 aa11.17□□□□□ -0.62
VPS50-211ENST00000474412 EHBP1Q8NDI1 1231 aa11.17□□□□□ -0.62
VPS50-211ENST00000474412 VPS8Q8N3P4 1428 aa11.17□□□□□ -0.62
VPS50-211ENST00000474412 TTC24A2A3L6 582 aaPredicted RBP11.16□□□□□ -0.62
VPS50-211ENST00000474412 PKDCCQ504Y2 493 aa11.16□□□□□ -0.62
VPS50-211ENST00000474412 ARMC2Q8NEN0 867 aa11.16□□□□□ -0.62
VPS50-211ENST00000474412 ATP10AO60312 1499 aa11.16□□□□□ -0.62
VPS50-211ENST00000474412 CROCC2H7BZ55 1655 aa11.16□□□□□ -0.62
VPS50-211ENST00000474412 CLTCQ00610 1675 aaKnown RBP11.16□□□□□ -0.62
VPS50-211ENST00000474412 MTUS2Q5JR59 1369 aa11.16□□□□□ -0.62
VPS50-211ENST00000474412 NCOA2Q15596 1464 aa11.15□□□□□ -0.62
VPS50-211ENST00000474412 MLH3Q9UHC1 1453 aa11.15□□□□□ -0.62
VPS50-211ENST00000474412 EFCAB2Q5VUJ9 269 aa11.15□□□□□ -0.62
VPS50-211ENST00000474412 MROH2AA6NES4 1674 aa11.14□□□□□ -0.63
VPS50-211ENST00000474412 LMTK3Q96Q04 1460 aa11.14□□□□□ -0.63
VPS50-211ENST00000474412 AGERQ15109 404 aa11.14□□□□□ -0.63
VPS50-211ENST00000474412 NBPF14Q5TI25 921 aa11.14□□□□□ -0.63
VPS50-211ENST00000474412 CAMSAP2Q08AD1 1489 aa11.13□□□□□ -0.63
VPS50-211ENST00000474412 ARID4BQ4LE39 1312 aaPredicted RBP11.13□□□□□ -0.63
VPS50-211ENST00000474412 NR6A1Q15406 480 aa11.13□□□□□ -0.63
VPS50-211ENST00000474412 AFAP1Q8N556 730 aa11.13□□□□□ -0.63
VPS50-211ENST00000474412 SNIP1Q8TAD8 396 aaKnown RBP11.13□□□□□ -0.63
VPS50-211ENST00000474412 TOR4AQ9NXH8 423 aa11.13□□□□□ -0.63
VPS50-211ENST00000474412 AGLP35573 1532 aa11.12□□□□□ -0.63
VPS50-211ENST00000474412 LRRC9Q6ZRR7 1453 aa11.12□□□□□ -0.63
VPS50-211ENST00000474412 DGAT1O75907 488 aa11.11□□□□□ -0.63
VPS50-211ENST00000474412 MLECQ14165 292 aa11.11□□□□□ -0.63
VPS50-211ENST00000474412 FOXJ1Q92949 421 aa11.11□□□□□ -0.63
VPS50-211ENST00000474412 CCNB3Q8WWL7 1395 aa11.11□□□□□ -0.63
VPS50-211ENST00000474412 HMX1Q9NP08 348 aaPredicted RBP11.1□□□□□ -0.63
VPS50-211ENST00000474412 ZNF777Q9ULD5 760 aaPredicted RBP11.1□□□□□ -0.63
VPS50-211ENST00000474412 ARHGEF5Q12774 1597 aa11.1□□□□□ -0.63
VPS50-211ENST00000474412 STRCQ7RTU9 1775 aa11.09□□□□□ -0.63
VPS50-211ENST00000474412 MBD5Q9P267 1494 aa11.09□□□□□ -0.63
VPS50-211ENST00000474412 VARSP26640 1264 aaKnown RBP11.09□□□□□ -0.63
VPS50-211ENST00000474412 BPHLQ86WA6 291 aaPredicted RBP11.09□□□□□ -0.63
VPS50-211ENST00000474412 PNMA1Q8ND90 353 aa11.09□□□□□ -0.63
VPS50-211ENST00000474412 FKBPLQ9UIM3 349 aa11.09□□□□□ -0.63
VPS50-211ENST00000474412 MYO3AQ8NEV4 1616 aa11.09□□□□□ -0.63
VPS50-211ENST00000474412 PLEKHH2Q8IVE3 1493 aa11.08□□□□□ -0.64
VPS50-211ENST00000474412 ALDH1A1P00352 501 aa11.08□□□□□ -0.64
VPS50-211ENST00000474412 GPKOWQ92917 476 aaPredicted RBP eCLIP11.08□□□□□ -0.64
VPS50-211ENST00000474412 CEP152O94986 1710 aa11.08□□□□□ -0.64
VPS50-211ENST00000474412 MAP3K1Q13233 1512 aa11.08□□□□□ -0.64
VPS50-211ENST00000474412 ZNF644Q9H582 1327 aaPredicted RBP11.08□□□□□ -0.64
VPS50-211ENST00000474412 ZNF142P52746 1687 aaPredicted RBP11.08□□□□□ -0.64
VPS50-211ENST00000474412 TRAF7Q6Q0C0 670 aa11.07□□□□□ -0.64
VPS50-211ENST00000474412 FAM174AQ8TBP5 190 aa11.07□□□□□ -0.64
VPS50-211ENST00000474412 EPS8L1Q8TE68 723 aa11.07□□□□□ -0.64
VPS50-211ENST00000474412 KIAA1107Q9UPP5 1409 aa11.07□□□□□ -0.64
VPS50-211ENST00000474412 CCDC141Q6ZP82 1450 aa11.06□□□□□ -0.64
VPS50-211ENST00000474412 PTPN23Q9H3S7 1636 aa11.06□□□□□ -0.64
VPS50-211ENST00000474412 J3QL48 77 aa11.06□□□□□ -0.64
VPS50-211ENST00000474412 SIAH2O43255 324 aa11.06□□□□□ -0.64
VPS50-211ENST00000474412 BANK1Q8NDB2 785 aa11.06□□□□□ -0.64
VPS50-211ENST00000474412 TLL2Q9Y6L7 1015 aa11.06□□□□□ -0.64
VPS50-211ENST00000474412 MAST1Q9Y2H9 1570 aa11.06□□□□□ -0.64
VPS50-211ENST00000474412 ZC3H4Q9UPT8 1303 aaKnown RBP11.06□□□□□ -0.64
VPS50-211ENST00000474412 MAGEB6P1A0A0J9YX57 407 aa11.05□□□□□ -0.64
VPS50-211ENST00000474412 SMPD1P17405 629 aa11.05□□□□□ -0.64
VPS50-211ENST00000474412 HNRNPMP52272 730 aaKnown RBP eCLIP11.05□□□□□ -0.64
VPS50-211ENST00000474412 A2MP01023 1474 aa11.05□□□□□ -0.64
VPS50-211ENST00000474412 SH3BP5LQ7L8J4 393 aa11.04□□□□□ -0.64
VPS50-211ENST00000474412 CARD14Q9BXL6 1004 aa11.04□□□□□ -0.64
VPS50-211ENST00000474412 CFDP1Q9UEE9 299 aaPredicted RBP11.04□□□□□ -0.64
VPS50-211ENST00000474412 WASF2Q9Y6W5 498 aa11.04□□□□□ -0.64
VPS50-211ENST00000474412 SETD1BQ9UPS6 1966 aaKnown RBP11.03□□□□□ -0.64
VPS50-211ENST00000474412 DNMT1P26358 1616 aaKnown RBP11.03□□□□□ -0.64
VPS50-211ENST00000474412 MROH1Q8NDA8 1641 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms