RNA–Protein interactions for RNA: ENST00000474344.1

VANGL1-205, Transcript of VANGL planar cell polarity protein 1, humanhuman

TSL 2

Gene VANGL1, Length 461 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-205ENST00000474344 A0A0G2JS52 829 aa14.05□□□□□ -0.16
VANGL1-205ENST00000474344 MYT1Q01538 1121 aa14.05□□□□□ -0.16
VANGL1-205ENST00000474344 FAM182BQ5T319 152 aa14.05□□□□□ -0.16
VANGL1-205ENST00000474344 AEBP1Q8IUX7 1158 aa14.05□□□□□ -0.16
VANGL1-205ENST00000474344 MYBBP1AQ9BQG0 1328 aaKnown RBP14.05□□□□□ -0.16
VANGL1-205ENST00000474344 PDE3BQ13370 1112 aa14.04□□□□□ -0.16
VANGL1-205ENST00000474344 RAPGEF4Q8WZA2 1011 aa14.04□□□□□ -0.16
VANGL1-205ENST00000474344 UPF1Q92900 1129 aaKnown RBP eCLIP14.04□□□□□ -0.16
VANGL1-205ENST00000474344 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.04□□□□□ -0.16
VANGL1-205ENST00000474344 ZCRB1Q8TBF4 217 aaKnown RBP14.03□□□□□ -0.16
VANGL1-205ENST00000474344 DLG5Q8TDM6 1919 aa14.03□□□□□ -0.16
VANGL1-205ENST00000474344 SCN11AQ9UI33 1791 aa14.02□□□□□ -0.16
VANGL1-205ENST00000474344 TOGARAM1Q9Y4F4 1720 aa14.02□□□□□ -0.16
VANGL1-205ENST00000474344 NHSQ6T4R5 1651 aa14.02□□□□□ -0.16
VANGL1-205ENST00000474344 TATP17735 454 aaPredicted RBP14.02□□□□□ -0.17
VANGL1-205ENST00000474344 SULT6B1Q6IMI4 303 aa14.02□□□□□ -0.17
VANGL1-205ENST00000474344 FAM196AQ6ZSG2 479 aa14.02□□□□□ -0.17
VANGL1-205ENST00000474344 CFAP53Q96M91 514 aa14.02□□□□□ -0.17
VANGL1-205ENST00000474344 DOT1LQ8TEK3 1739 aa14.01□□□□□ -0.17
VANGL1-205ENST00000474344 CYP27B1O15528 508 aa14.01□□□□□ -0.17
VANGL1-205ENST00000474344 BTAF1O14981 1849 aa14.01□□□□□ -0.17
VANGL1-205ENST00000474344 ADAMTS7Q9UKP4 1686 aa13.99□□□□□ -0.17
VANGL1-205ENST00000474344 HMOX1P09601 288 aa13.99□□□□□ -0.17
VANGL1-205ENST00000474344 NKX1-1Q15270 411 aaPredicted RBP13.99□□□□□ -0.17
VANGL1-205ENST00000474344 RSPH6AQ9H0K4 717 aa13.99□□□□□ -0.17
VANGL1-205ENST00000474344 RGPD3A6NKT7 1758 aaPredicted RBP13.99□□□□□ -0.17
VANGL1-205ENST00000474344 RGPD4Q7Z3J3 1758 aa13.99□□□□□ -0.17
VANGL1-205ENST00000474344 CCDC125Q86Z20 511 aa13.98□□□□□ -0.17
VANGL1-205ENST00000474344 NUDCQ9Y266 331 aa13.98□□□□□ -0.17
VANGL1-205ENST00000474344 PCDH11XQ9BZA7 1347 aa13.97□□□□□ -0.17
VANGL1-205ENST00000474344 PCDH11YQ9BZA8 1340 aa13.97□□□□□ -0.17
VANGL1-205ENST00000474344 U2SURPO15042 1029 aaKnown RBP13.97□□□□□ -0.17
VANGL1-205ENST00000474344 PTF1AQ7RTS3 328 aa13.97□□□□□ -0.17
VANGL1-205ENST00000474344 DDX54Q8TDD1 881 aaKnown RBP13.97□□□□□ -0.17
VANGL1-205ENST00000474344 SPG7Q9UQ90 795 aa13.97□□□□□ -0.17
VANGL1-205ENST00000474344 FCHSD2O94868 740 aa13.96□□□□□ -0.17
VANGL1-205ENST00000474344 AMOTQ4VCS5 1084 aa13.96□□□□□ -0.17
VANGL1-205ENST00000474344 CCDC184Q52MB2 194 aa13.96□□□□□ -0.17
VANGL1-205ENST00000474344 PLEKHO1Q53GL0 409 aaPredicted RBP13.96□□□□□ -0.17
VANGL1-205ENST00000474344 ANP32CO43423 234 aa13.95□□□□□ -0.18
VANGL1-205ENST00000474344 TRIM37O94972 964 aa13.95□□□□□ -0.18
VANGL1-205ENST00000474344 U2AF1L5P0DN76 240 aaPredicted RBP13.95□□□□□ -0.18
VANGL1-205ENST00000474344 PHKG2P15735 406 aa13.95□□□□□ -0.18
VANGL1-205ENST00000474344 U2AF1Q01081 240 aaKnown RBP eCLIP13.95□□□□□ -0.18
VANGL1-205ENST00000474344 LY75O60449 1722 aa13.95□□□□□ -0.18
VANGL1-205ENST00000474344 SIPA1L3O60292 1781 aaPredicted RBP13.94□□□□□ -0.18
VANGL1-205ENST00000474344 KCNQ2O43526 872 aa13.94□□□□□ -0.18
VANGL1-205ENST00000474344 IFNL2Q8IZJ0 200 aa13.94□□□□□ -0.18
VANGL1-205ENST00000474344 PHACTR3Q96KR7 559 aa13.94□□□□□ -0.18
VANGL1-205ENST00000474344 PLEKHF1Q96S99 279 aa13.94□□□□□ -0.18
VANGL1-205ENST00000474344 BCL11BQ9C0K0 894 aaPredicted RBP13.94□□□□□ -0.18
VANGL1-205ENST00000474344 RREB1Q92766 1687 aa13.94□□□□□ -0.18
VANGL1-205ENST00000474344 MTHFSDQ2M296 383 aaKnown RBP13.93□□□□□ -0.18
VANGL1-205ENST00000474344 KDM6AO15550 1401 aaPredicted RBP13.92□□□□□ -0.18
VANGL1-205ENST00000474344 PRKAR2BP31323 418 aa13.92□□□□□ -0.18
VANGL1-205ENST00000474344 ZNF530Q6P9A1 599 aaPredicted RBP13.92□□□□□ -0.18
VANGL1-205ENST00000474344 ACSBG1Q96GR2 724 aa13.91□□□□□ -0.18
VANGL1-205ENST00000474344 TAF1LQ8IZX4 1826 aa13.91□□□□□ -0.18
VANGL1-205ENST00000474344 PLSCR1O15162 318 aa13.9□□□□□ -0.18
VANGL1-205ENST00000474344 PRIM1P49642 420 aaKnown RBP13.9□□□□□ -0.18
VANGL1-205ENST00000474344 AKAP4Q5JQC9 854 aa13.9□□□□□ -0.18
VANGL1-205ENST00000474344 CAMKK2Q96RR4 588 aa13.9□□□□□ -0.18
VANGL1-205ENST00000474344 ADAMTS8Q9UP79 889 aa13.9□□□□□ -0.18
VANGL1-205ENST00000474344 NUP188Q5SRE5 1749 aa13.9□□□□□ -0.18
VANGL1-205ENST00000474344 HSP90AB1P08238 724 aaKnown RBP13.89□□□□□ -0.19
VANGL1-205ENST00000474344 DEFB132Q7Z7B7 95 aa13.89□□□□□ -0.19
VANGL1-205ENST00000474344 PNISRQ8TF01 805 aaKnown RBP13.89□□□□□ -0.19
VANGL1-205ENST00000474344 DCAF5Q96JK2 942 aa13.89□□□□□ -0.19
VANGL1-205ENST00000474344 MRC1P22897 1456 aa13.88□□□□□ -0.19
VANGL1-205ENST00000474344 ERVV-2B6SEH9 535 aa13.88□□□□□ -0.19
VANGL1-205ENST00000474344 APBA3O96018 575 aa13.88□□□□□ -0.19
VANGL1-205ENST00000474344 PROM2Q8N271 834 aa13.88□□□□□ -0.19
VANGL1-205ENST00000474344 PAPPAQ13219 1627 aa13.87□□□□□ -0.19
VANGL1-205ENST00000474344 EN1Q05925 392 aaPredicted RBP13.87□□□□□ -0.19
VANGL1-205ENST00000474344 C1orf141Q5JVX7 400 aa13.87□□□□□ -0.19
VANGL1-205ENST00000474344 GAS2L2Q8NHY3 880 aa13.87□□□□□ -0.19
VANGL1-205ENST00000474344 LGR6Q9HBX8 967 aa13.87□□□□□ -0.19
VANGL1-205ENST00000474344 ZNF831Q5JPB2 1677 aa13.87□□□□□ -0.19
VANGL1-205ENST00000474344 RNMTO43148 476 aaKnown RBP13.86□□□□□ -0.19
VANGL1-205ENST00000474344 BAG6P46379 1132 aa13.86□□□□□ -0.19
VANGL1-205ENST00000474344 SF3B2Q13435 895 aaKnown RBP13.86□□□□□ -0.19
VANGL1-205ENST00000474344 DIEXFQ68CQ4 756 aaKnown RBP13.86□□□□□ -0.19
VANGL1-205ENST00000474344 MPRIPQ6WCQ1 1025 aa13.86□□□□□ -0.19
VANGL1-205ENST00000474344 IL17REQ8NFR9 667 aa13.86□□□□□ -0.19
VANGL1-205ENST00000474344 PIGBQ92521 554 aa13.86□□□□□ -0.19
VANGL1-205ENST00000474344 UBR2Q8IWV8 1755 aa13.86□□□□□ -0.19
VANGL1-205ENST00000474344 CEMIPQ8WUJ3 1361 aa13.85□□□□□ -0.19
VANGL1-205ENST00000474344 MAP3K5Q99683 1374 aa13.85□□□□□ -0.19
VANGL1-205ENST00000474344 GNAT3A8MTJ3 354 aa13.85□□□□□ -0.19
VANGL1-205ENST00000474344 EZH2Q15910 746 aaKnown RBP13.85□□□□□ -0.19
VANGL1-205ENST00000474344 PNNQ9H307 717 aaKnown RBP13.85□□□□□ -0.19
VANGL1-205ENST00000474344 MRS2Q9HD23 443 aa13.85□□□□□ -0.19
VANGL1-205ENST00000474344 MYH14Q7Z406 1995 aaKnown RBP13.84□□□□□ -0.19
VANGL1-205ENST00000474344 WDR43Q15061 677 aaKnown RBP eCLIP13.84□□□□□ -0.19
VANGL1-205ENST00000474344 HTATSF1O43719 755 aaKnown RBP13.83□□□□□ -0.2
VANGL1-205ENST00000474344 NFE2L2Q16236 605 aa13.83□□□□□ -0.2
VANGL1-205ENST00000474344 SYTL4Q96C24 671 aaPredicted RBP13.83□□□□□ -0.2
VANGL1-205ENST00000474344 RUNDC1Q96C34 613 aa13.83□□□□□ -0.2
VANGL1-205ENST00000474344 TUBGCP6Q96RT7 1819 aa13.83□□□□□ -0.2
VANGL1-205ENST00000474344 CICQ96RK0 1608 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms