RNA–Protein interactions for RNA: ENST00000473988.1

RRP1-203, Transcript of ribosomal RNA processing 1, humanhuman

TSL 3

Gene RRP1, Length 627 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-203ENST00000473988 CCNL1Q9UK58 526 aaPredicted RBP8.54□□□□□ -1.04
RRP1-203ENST00000473988 WDR90Q96KV7 1748 aa8.54□□□□□ -1.04
RRP1-203ENST00000473988 PRIM1P49642 420 aaKnown RBP8.53□□□□□ -1.04
RRP1-203ENST00000473988 DDX54Q8TDD1 881 aaKnown RBP8.53□□□□□ -1.04
RRP1-203ENST00000473988 NLRP2Q9NX02 1062 aa8.53□□□□□ -1.04
RRP1-203ENST00000473988 SLIT3O75094 1523 aa8.53□□□□□ -1.04
RRP1-203ENST00000473988 COL18A1P39060 1754 aa8.53□□□□□ -1.04
RRP1-203ENST00000473988 SRPK2P78362 688 aaKnown RBP8.52□□□□□ -1.05
RRP1-203ENST00000473988 FAM161AQ3B820 660 aa8.52□□□□□ -1.05
RRP1-203ENST00000473988 SMIM5Q71RC9 77 aa8.52□□□□□ -1.05
RRP1-203ENST00000473988 KCNH5Q8NCM2 988 aa8.52□□□□□ -1.05
RRP1-203ENST00000473988 CABP2Q9NPB3 220 aa8.52□□□□□ -1.05
RRP1-203ENST00000473988 CABP1Q9NZU7 370 aa8.52□□□□□ -1.05
RRP1-203ENST00000473988 BTAF1O14981 1849 aa8.52□□□□□ -1.05
RRP1-203ENST00000473988 ABCC6O95255 1503 aa8.51□□□□□ -1.05
RRP1-203ENST00000473988 ARHGAP27Q6ZUM4 889 aa8.51□□□□□ -1.05
RRP1-203ENST00000473988 ITSN1Q15811 1721 aa8.51□□□□□ -1.05
RRP1-203ENST00000473988 ARHGEF28Q8N1W1 1705 aaKnown RBP8.51□□□□□ -1.05
RRP1-203ENST00000473988 WNK3Q9BYP7 1800 aa8.5□□□□□ -1.05
RRP1-203ENST00000473988 QSER1Q2KHR3 1735 aa8.5□□□□□ -1.05
RRP1-203ENST00000473988 DCAF11Q8TEB1 546 aa8.5□□□□□ -1.05
RRP1-203ENST00000473988 RRAGCQ9HB90 399 aa8.5□□□□□ -1.05
RRP1-203ENST00000473988 BCS1LQ9Y276 419 aa8.5□□□□□ -1.05
RRP1-203ENST00000473988 ERBB3P21860 1342 aa8.5□□□□□ -1.05
RRP1-203ENST00000473988 C9orf131Q5VYM1 1079 aa8.49□□□□□ -1.05
RRP1-203ENST00000473988 AMIGO3Q86WK7 504 aa8.49□□□□□ -1.05
RRP1-203ENST00000473988 FLAD1Q8NFF5 587 aa8.49□□□□□ -1.05
RRP1-203ENST00000473988 TRPM1Q7Z4N2 1603 aa8.49□□□□□ -1.05
RRP1-203ENST00000473988 NSD2O96028 1365 aa8.48□□□□□ -1.05
RRP1-203ENST00000473988 TUBGCP6Q96RT7 1819 aa8.48□□□□□ -1.05
RRP1-203ENST00000473988 MYCNP04198 464 aaPredicted RBP8.48□□□□□ -1.05
RRP1-203ENST00000473988 SMC1BQ8NDV3 1235 aa8.48□□□□□ -1.05
RRP1-203ENST00000473988 TTC21BQ7Z4L5 1316 aa8.48□□□□□ -1.05
RRP1-203ENST00000473988 ANKRD36BQ8N2N9 1353 aa8.48□□□□□ -1.05
RRP1-203ENST00000473988 KAT6BQ8WYB5 2073 aa8.47□□□□□ -1.05
RRP1-203ENST00000473988 A0A0G2JLW4 131 aa8.47□□□□□ -1.05
RRP1-203ENST00000473988 ANKRD24Q8TF21 1146 aa8.47□□□□□ -1.05
RRP1-203ENST00000473988 FOXN1O15353 648 aa8.46□□□□□ -1.06
RRP1-203ENST00000473988 PHF14O94880 888 aa8.46□□□□□ -1.06
RRP1-203ENST00000473988 KDM2BQ8NHM5 1336 aa8.46□□□□□ -1.06
RRP1-203ENST00000473988 CICQ96RK0 1608 aaPredicted RBP8.46□□□□□ -1.06
RRP1-203ENST00000473988 USP47Q96K76 1375 aa8.46□□□□□ -1.06
RRP1-203ENST00000473988 KCPQ6ZWJ8 1503 aa8.45□□□□□ -1.06
RRP1-203ENST00000473988 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.45□□□□□ -1.06
RRP1-203ENST00000473988 FCHSD2O94868 740 aa8.45□□□□□ -1.06
RRP1-203ENST00000473988 PRDM10Q9NQV6 1147 aa8.45□□□□□ -1.06
RRP1-203ENST00000473988 RGPD5Q99666 1765 aa8.44□□□□□ -1.06
RRP1-203ENST00000473988 TGFB2P61812 414 aa8.44□□□□□ -1.06
RRP1-203ENST00000473988 MLLT1Q03111 559 aaPredicted RBP8.44□□□□□ -1.06
RRP1-203ENST00000473988 ABHD8Q96I13 439 aa8.44□□□□□ -1.06
RRP1-203ENST00000473988 PXDNLA1KZ92 1463 aa8.44□□□□□ -1.06
RRP1-203ENST00000473988 PIK3C2AO00443 1686 aa8.43□□□□□ -1.06
RRP1-203ENST00000473988 MMP10P09238 476 aa8.43□□□□□ -1.06
RRP1-203ENST00000473988 DPEP1P16444 411 aa8.43□□□□□ -1.06
RRP1-203ENST00000473988 NBPF1Q3BBV0 1214 aa8.43□□□□□ -1.06
RRP1-203ENST00000473988 AK7Q96M32 723 aa8.43□□□□□ -1.06
RRP1-203ENST00000473988 RNF181Q9P0P0 153 aa8.43□□□□□ -1.06
RRP1-203ENST00000473988 MKRN1Q9UHC7 482 aaKnown RBP8.43□□□□□ -1.06
RRP1-203ENST00000473988 NFAT5O94916 1531 aa8.43□□□□□ -1.06
RRP1-203ENST00000473988 LTV1Q96GA3 475 aaPredicted RBP8.42□□□□□ -1.06
RRP1-203ENST00000473988 STAC3Q96MF2 364 aa8.42□□□□□ -1.06
RRP1-203ENST00000473988 ZNF692Q9BU19 519 aaPredicted RBP8.42□□□□□ -1.06
RRP1-203ENST00000473988 PLEKHG2Q9H7P9 1386 aa8.42□□□□□ -1.06
RRP1-203ENST00000473988 C10orf71Q711Q0 1435 aa8.42□□□□□ -1.06
RRP1-203ENST00000473988 TTC21AQ8NDW8 1320 aa8.41□□□□□ -1.06
RRP1-203ENST00000473988 CENPJQ9HC77 1338 aaPredicted RBP8.41□□□□□ -1.06
RRP1-203ENST00000473988 KCNA3P22001 575 aa8.41□□□□□ -1.06
RRP1-203ENST00000473988 LBX1P52954 281 aa8.41□□□□□ -1.06
RRP1-203ENST00000473988 ZCRB1Q8TBF4 217 aaKnown RBP8.41□□□□□ -1.06
RRP1-203ENST00000473988 LY75O60449 1722 aa8.4□□□□□ -1.06
RRP1-203ENST00000473988 PALLDQ8WX93 1383 aa8.4□□□□□ -1.06
RRP1-203ENST00000473988 VEGFAP15692 232 aaPredicted RBP8.4□□□□□ -1.06
RRP1-203ENST00000473988 SSFA2P28290 1259 aa8.4□□□□□ -1.06
RRP1-203ENST00000473988 CTCFP49711 727 aaPredicted RBP8.4□□□□□ -1.06
RRP1-203ENST00000473988 RGS19P49795 217 aa8.4□□□□□ -1.06
RRP1-203ENST00000473988 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.4□□□□□ -1.06
RRP1-203ENST00000473988 CCDC85CA6NKD9 419 aa8.39□□□□□ -1.07
RRP1-203ENST00000473988 HMGB2P26583 209 aaKnown RBP8.39□□□□□ -1.07
RRP1-203ENST00000473988 MPRIPQ6WCQ1 1025 aa8.39□□□□□ -1.07
RRP1-203ENST00000473988 NME9Q86XW9 330 aa8.39□□□□□ -1.07
RRP1-203ENST00000473988 TNRC18O15417 2968 aaPredicted RBP8.39□□□□□ -1.07
RRP1-203ENST00000473988 LINC00116Q8NCU8 138 aa8.38□□□□□ -1.07
RRP1-203ENST00000473988 IP6K1Q92551 441 aa8.38□□□□□ -1.07
RRP1-203ENST00000473988 AIDAQ96BJ3 306 aa8.38□□□□□ -1.07
RRP1-203ENST00000473988 DCAF5Q96JK2 942 aa8.38□□□□□ -1.07
RRP1-203ENST00000473988 CREBZFQ9NS37 354 aa8.38□□□□□ -1.07
RRP1-203ENST00000473988 U3KPZ7 1027 aaPredicted RBP8.38□□□□□ -1.07
RRP1-203ENST00000473988 USP31Q70CQ4 1352 aa8.37□□□□□ -1.07
RRP1-203ENST00000473988 GLTPD2A6NH11 291 aa8.37□□□□□ -1.07
RRP1-203ENST00000473988 POTECB2RU33 542 aa8.37□□□□□ -1.07
RRP1-203ENST00000473988 WBP1LQ9NX94 342 aa8.37□□□□□ -1.07
RRP1-203ENST00000473988 PIM2Q9P1W9 311 aa8.37□□□□□ -1.07
RRP1-203ENST00000473988 KTN1Q86UP2 1357 aaKnown RBP8.36□□□□□ -1.07
RRP1-203ENST00000473988 GNPATO15228 680 aa8.36□□□□□ -1.07
RRP1-203ENST00000473988 VEGFBP49765 207 aa8.36□□□□□ -1.07
RRP1-203ENST00000473988 TMF1P82094 1093 aa8.36□□□□□ -1.07
RRP1-203ENST00000473988 DALRD3Q5D0E6 543 aaKnown RBP8.36□□□□□ -1.07
RRP1-203ENST00000473988 NLGN1Q8N2Q7 840 aa8.36□□□□□ -1.07
RRP1-203ENST00000473988 CCDC87Q9NVE4 849 aa8.36□□□□□ -1.07
RRP1-203ENST00000473988 DOT1LQ8TEK3 1739 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms