RNA–Protein interactions for RNA: ENST00000473783.5

SSBP1-209, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-209ENST00000473783 PCNTO95613 3336 aa15.37■□□□□ 0.05
SSBP1-209ENST00000473783 ANKRD36BQ8N2N9 1353 aa15.36■□□□□ 0.05
SSBP1-209ENST00000473783 C5P01031 1676 aa15.36■□□□□ 0.05
SSBP1-209ENST00000473783 CCNL1Q9UK58 526 aaPredicted RBP15.36■□□□□ 0.05
SSBP1-209ENST00000473783 IGSF1Q8N6C5 1336 aa15.36■□□□□ 0.05
SSBP1-209ENST00000473783 USP54Q70EL1 1684 aa15.35■□□□□ 0.05
SSBP1-209ENST00000473783 ZNF692Q9BU19 519 aaPredicted RBP15.35■□□□□ 0.05
SSBP1-209ENST00000473783 NSD2O96028 1365 aa15.35■□□□□ 0.05
SSBP1-209ENST00000473783 TAF1LQ8IZX4 1826 aa15.34■□□□□ 0.05
SSBP1-209ENST00000473783 FLAD1Q8NFF5 587 aa15.34■□□□□ 0.05
SSBP1-209ENST00000473783 SYTL4Q96C24 671 aaPredicted RBP15.34■□□□□ 0.05
SSBP1-209ENST00000473783 FAM208AQ9UK61 1670 aaKnown RBP15.34■□□□□ 0.05
SSBP1-209ENST00000473783 RBM46Q8TBY0 533 aaKnown RBP15.33■□□□□ 0.04
SSBP1-209ENST00000473783 HMGB2P26583 209 aaKnown RBP15.32■□□□□ 0.04
SSBP1-209ENST00000473783 PRIM1P49642 420 aaKnown RBP15.32■□□□□ 0.04
SSBP1-209ENST00000473783 DDX54Q8TDD1 881 aaKnown RBP15.32■□□□□ 0.04
SSBP1-209ENST00000473783 ANKRD24Q8TF21 1146 aa15.31■□□□□ 0.04
SSBP1-209ENST00000473783 MON2Q7Z3U7 1717 aa15.3■□□□□ 0.04
SSBP1-209ENST00000473783 USP47Q96K76 1375 aa15.3■□□□□ 0.04
SSBP1-209ENST00000473783 HTRA3P83110 453 aa15.29■□□□□ 0.04
SSBP1-209ENST00000473783 FSTL1Q12841 308 aa15.29■□□□□ 0.04
SSBP1-209ENST00000473783 NMRK2Q9NPI5 230 aa15.29■□□□□ 0.04
SSBP1-209ENST00000473783 WWC3Q9ULE0 1092 aa15.29■□□□□ 0.04
SSBP1-209ENST00000473783 USP31Q70CQ4 1352 aa15.28■□□□□ 0.04
SSBP1-209ENST00000473783 UBR3Q6ZT12 1888 aa15.27■□□□□ 0.04
SSBP1-209ENST00000473783 KIF13BQ9NQT8 1826 aa15.27■□□□□ 0.04
SSBP1-209ENST00000473783 EVC2Q86UK5 1308 aa15.27■□□□□ 0.04
SSBP1-209ENST00000473783 NBPF1Q3BBV0 1214 aa15.27■□□□□ 0.04
SSBP1-209ENST00000473783 C16orf71Q8IYS4 520 aaPredicted RBP15.27■□□□□ 0.04
SSBP1-209ENST00000473783 TOGARAM1Q9Y4F4 1720 aa15.26■□□□□ 0.03
SSBP1-209ENST00000473783 KTN1Q86UP2 1357 aaKnown RBP15.26■□□□□ 0.03
SSBP1-209ENST00000473783 C4BP0C0L5 1744 aa15.26■□□□□ 0.03
SSBP1-209ENST00000473783 NSD3Q9BZ95 1437 aa15.26■□□□□ 0.03
SSBP1-209ENST00000473783 ADRA2BP18089 450 aa15.25■□□□□ 0.03
SSBP1-209ENST00000473783 KIAA1551Q9HCM1 1747 aa15.25■□□□□ 0.03
SSBP1-209ENST00000473783 C10orf71Q711Q0 1435 aa15.24■□□□□ 0.03
SSBP1-209ENST00000473783 PLEKHG2Q9H7P9 1386 aa15.24■□□□□ 0.03
SSBP1-209ENST00000473783 PKD1L3Q7Z443 1732 aa15.23■□□□□ 0.03
SSBP1-209ENST00000473783 TNRC6CQ9HCJ0 1690 aaKnown RBP15.23■□□□□ 0.03
SSBP1-209ENST00000473783 RAB3GAP2Q9H2M9 1393 aa15.23■□□□□ 0.03
SSBP1-209ENST00000473783 N4BP2Q86UW6 1770 aaPredicted RBP15.22■□□□□ 0.03
SSBP1-209ENST00000473783 HSPA1AP0DMV8 641 aaKnown RBP15.22■□□□□ 0.03
SSBP1-209ENST00000473783 HSPA1BP0DMV9 641 aaKnown RBP15.22■□□□□ 0.03
SSBP1-209ENST00000473783 PCDH10Q9P2E7 1040 aa15.22■□□□□ 0.03
SSBP1-209ENST00000473783 PXDNLA1KZ92 1463 aa15.21■□□□□ 0.03
SSBP1-209ENST00000473783 BRCA1P38398 1863 aaKnown RBP15.21■□□□□ 0.03
SSBP1-209ENST00000473783 ZCRB1Q8TBF4 217 aaKnown RBP15.21■□□□□ 0.03
SSBP1-209ENST00000473783 AK7Q96M32 723 aa15.21■□□□□ 0.03
SSBP1-209ENST00000473783 ARFGEF1Q9Y6D6 1849 aa15.2■□□□□ 0.02
SSBP1-209ENST00000473783 RGPD2P0DJD1 1756 aa15.2■□□□□ 0.02
SSBP1-209ENST00000473783 PALLDQ8WX93 1383 aa15.2■□□□□ 0.02
SSBP1-209ENST00000473783 KDM2BQ8NHM5 1336 aa15.19■□□□□ 0.02
SSBP1-209ENST00000473783 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.19■□□□□ 0.02
SSBP1-209ENST00000473783 BCS1LQ9Y276 419 aa15.19■□□□□ 0.02
SSBP1-209ENST00000473783 MEGF6O75095 1541 aa15.18■□□□□ 0.02
SSBP1-209ENST00000473783 SSFA2P28290 1259 aa15.18■□□□□ 0.02
SSBP1-209ENST00000473783 TGFB2P61812 414 aa15.18■□□□□ 0.02
SSBP1-209ENST00000473783 ARHGAP27Q6ZUM4 889 aa15.18■□□□□ 0.02
SSBP1-209ENST00000473783 NME9Q86XW9 330 aa15.18■□□□□ 0.02
SSBP1-209ENST00000473783 IP6K1Q92551 441 aa15.18■□□□□ 0.02
SSBP1-209ENST00000473783 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.17■□□□□ 0.02
SSBP1-209ENST00000473783 AMIGO3Q86WK7 504 aa15.17■□□□□ 0.02
SSBP1-209ENST00000473783 SMC1BQ8NDV3 1235 aa15.17■□□□□ 0.02
SSBP1-209ENST00000473783 ITGB4P16144 1822 aa15.17■□□□□ 0.02
SSBP1-209ENST00000473783 KCPQ6ZWJ8 1503 aa15.17■□□□□ 0.02
SSBP1-209ENST00000473783 SBNO2Q9Y2G9 1366 aa15.16■□□□□ 0.02
SSBP1-209ENST00000473783 PHF14O94880 888 aa15.16■□□□□ 0.02
SSBP1-209ENST00000473783 CGNL1Q0VF96 1302 aa15.16■□□□□ 0.02
SSBP1-209ENST00000473783 C9orf131Q5VYM1 1079 aa15.15■□□□□ 0.02
SSBP1-209ENST00000473783 LTV1Q96GA3 475 aaPredicted RBP15.15■□□□□ 0.02
SSBP1-209ENST00000473783 SMARCC1Q92922 1105 aaPredicted RBP15.14■□□□□ 0.01
SSBP1-209ENST00000473783 MAP2P11137 1827 aaKnown RBP15.14■□□□□ 0.01
SSBP1-209ENST00000473783 SBF1O95248 1867 aa15.14■□□□□ 0.01
SSBP1-209ENST00000473783 CD163L1Q9NR16 1453 aa15.14■□□□□ 0.01
SSBP1-209ENST00000473783 EDC4Q6P2E9 1401 aaKnown RBP15.12■□□□□ 0.01
SSBP1-209ENST00000473783 A0A0G2JLW4 131 aa15.12■□□□□ 0.01
SSBP1-209ENST00000473783 FCHSD2O94868 740 aa15.12■□□□□ 0.01
SSBP1-209ENST00000473783 MMP10P09238 476 aa15.12■□□□□ 0.01
SSBP1-209ENST00000473783 RRAGCQ9HB90 399 aa15.12■□□□□ 0.01
SSBP1-209ENST00000473783 MPRIPQ6WCQ1 1025 aa15.1■□□□□ 0.01
SSBP1-209ENST00000473783 SMIM5Q71RC9 77 aa15.1■□□□□ 0.01
SSBP1-209ENST00000473783 PCDH11XQ9BZA7 1347 aa15.1■□□□□ 0.01
SSBP1-209ENST00000473783 PCDH11YQ9BZA8 1340 aa15.1■□□□□ 0.01
SSBP1-209ENST00000473783 C4AP0C0L4 1744 aa15.09■□□□□ 0.01
SSBP1-209ENST00000473783 DPEP1P16444 411 aa15.08■□□□□ 0
SSBP1-209ENST00000473783 HOXC9P31274 260 aa15.08■□□□□ 0
SSBP1-209ENST00000473783 HDGFL2Q7Z4V5 671 aaPredicted RBP15.08■□□□□ 0
SSBP1-209ENST00000473783 RAPGEF4Q8WZA2 1011 aa15.08■□□□□ 0
SSBP1-209ENST00000473783 RNF181Q9P0P0 153 aa15.08■□□□□ 0
SSBP1-209ENST00000473783 GNPATO15228 680 aa15.07■□□□□ 0
SSBP1-209ENST00000473783 CCDC87Q9NVE4 849 aa15.07■□□□□ 0
SSBP1-209ENST00000473783 MAP3K19Q56UN5 1328 aa15.07■□□□□ 0
SSBP1-209ENST00000473783 ZC3H4Q9UPT8 1303 aaKnown RBP15.07■□□□□ 0
SSBP1-209ENST00000473783 NLGN1Q8N2Q7 840 aa15.06■□□□□ 0
SSBP1-209ENST00000473783 LINC00116Q8NCU8 138 aa15.06■□□□□ 0
SSBP1-209ENST00000473783 DCAF5Q96JK2 942 aa15.06■□□□□ 0
SSBP1-209ENST00000473783 PRDM10Q9NQV6 1147 aa15.06■□□□□ 0
SSBP1-209ENST00000473783 RTL1A6NKG5 1358 aa15.06■□□□□ 0
SSBP1-209ENST00000473783 LOC102724428A0A0B4J2F2 783 aa15.05■□□□□ -0
SSBP1-209ENST00000473783 TATP17735 454 aaPredicted RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 249.2 ms