RNA–Protein interactions for RNA: ENST00000473546.1

ARF1-205, Transcript of ADP ribosylation factor 1, humanhuman

TSL 2

Gene ARF1, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-205ENST00000473546 TUBGCP6Q96RT7 1819 aa18.28■□□□□ 0.52
ARF1-205ENST00000473546 PAPPAQ13219 1627 aa18.28■□□□□ 0.52
ARF1-205ENST00000473546 CASZ1Q86V15 1759 aa18.28■□□□□ 0.52
ARF1-205ENST00000473546 PPM1GO15355 546 aaPredicted RBP18.28■□□□□ 0.52
ARF1-205ENST00000473546 SMG6Q86US8 1419 aaKnown RBP18.28■□□□□ 0.52
ARF1-205ENST00000473546 LY75O60449 1722 aa18.28■□□□□ 0.52
ARF1-205ENST00000473546 KIF24Q5T7B8 1368 aa18.28■□□□□ 0.52
ARF1-205ENST00000473546 WASHC2AQ641Q2 1341 aa18.27■□□□□ 0.52
ARF1-205ENST00000473546 R3HDM1Q15032 1099 aaKnown RBP18.27■□□□□ 0.52
ARF1-205ENST00000473546 PARD3Q8TEW0 1356 aa18.27■□□□□ 0.51
ARF1-205ENST00000473546 BCL11BQ9C0K0 894 aaPredicted RBP18.26■□□□□ 0.51
ARF1-205ENST00000473546 PROM2Q8N271 834 aa18.25■□□□□ 0.51
ARF1-205ENST00000473546 DDX54Q8TDD1 881 aaKnown RBP18.25■□□□□ 0.51
ARF1-205ENST00000473546 VIRMAQ69YN4 1812 aaKnown RBP18.24■□□□□ 0.51
ARF1-205ENST00000473546 AMER1Q5JTC6 1135 aaPredicted RBP18.24■□□□□ 0.51
ARF1-205ENST00000473546 ANO8Q9HCE9 1232 aaPredicted RBP18.24■□□□□ 0.51
ARF1-205ENST00000473546 NSD2O96028 1365 aa18.24■□□□□ 0.51
ARF1-205ENST00000473546 EIF4A2Q14240 407 aaKnown RBP18.21■□□□□ 0.51
ARF1-205ENST00000473546 EYA1Q99502 592 aa18.21■□□□□ 0.51
ARF1-205ENST00000473546 PER1O15534 1290 aaPredicted RBP18.2■□□□□ 0.5
ARF1-205ENST00000473546 ZCRB1Q8TBF4 217 aaKnown RBP18.2■□□□□ 0.5
ARF1-205ENST00000473546 TAF1LQ8IZX4 1826 aa18.2■□□□□ 0.5
ARF1-205ENST00000473546 PLSCR1O15162 318 aa18.19■□□□□ 0.5
ARF1-205ENST00000473546 MORC1Q86VD1 984 aa18.18■□□□□ 0.5
ARF1-205ENST00000473546 PDGFDQ9GZP0 370 aaPredicted RBP18.18■□□□□ 0.5
ARF1-205ENST00000473546 KNSTRNQ9Y448 316 aa18.18■□□□□ 0.5
ARF1-205ENST00000473546 TXNRD1Q16881 649 aa18.17■□□□□ 0.5
ARF1-205ENST00000473546 RAPGEF4Q8WZA2 1011 aa18.17■□□□□ 0.5
ARF1-205ENST00000473546 QSER1Q2KHR3 1735 aa18.16■□□□□ 0.5
ARF1-205ENST00000473546 CYP27B1O15528 508 aa18.16■□□□□ 0.5
ARF1-205ENST00000473546 TATP17735 454 aaPredicted RBP18.16■□□□□ 0.5
ARF1-205ENST00000473546 CNGB1Q14028 1251 aaPredicted RBP18.16■□□□□ 0.5
ARF1-205ENST00000473546 C5P01031 1676 aa18.15■□□□□ 0.5
ARF1-205ENST00000473546 PRIM1P49642 420 aaKnown RBP18.15■□□□□ 0.5
ARF1-205ENST00000473546 CC2D1BQ5T0F9 858 aaKnown RBP18.15■□□□□ 0.5
ARF1-205ENST00000473546 IGSF1Q8N6C5 1336 aa18.15■□□□□ 0.5
ARF1-205ENST00000473546 KCNQ4P56696 695 aa18.14■□□□□ 0.49
ARF1-205ENST00000473546 AEBP1Q8IUX7 1158 aa18.14■□□□□ 0.49
ARF1-205ENST00000473546 LRRC4BQ9NT99 713 aa18.14■□□□□ 0.49
ARF1-205ENST00000473546 COL3A1P02461 1466 aaPredicted RBP18.14■□□□□ 0.49
ARF1-205ENST00000473546 SYTL4Q96C24 671 aaPredicted RBP18.13■□□□□ 0.49
ARF1-205ENST00000473546 PCDH11XQ9BZA7 1347 aa18.12■□□□□ 0.49
ARF1-205ENST00000473546 PCDH11YQ9BZA8 1340 aa18.12■□□□□ 0.49
ARF1-205ENST00000473546 ZNF827Q17R98 1081 aa18.11■□□□□ 0.49
ARF1-205ENST00000473546 SCN11AQ9UI33 1791 aa18.11■□□□□ 0.49
ARF1-205ENST00000473546 NBPF14Q5TI25 921 aa18.09■□□□□ 0.49
ARF1-205ENST00000473546 IL13P35225 146 aa18.08■□□□□ 0.48
ARF1-205ENST00000473546 MTHFSP49914 203 aa18.08■□□□□ 0.48
ARF1-205ENST00000473546 NPC1L1Q9UHC9 1359 aa18.07■□□□□ 0.48
ARF1-205ENST00000473546 COL24A1Q17RW2 1714 aa18.07■□□□□ 0.48
ARF1-205ENST00000473546 KDM6AO15550 1401 aaPredicted RBP18.06■□□□□ 0.48
ARF1-205ENST00000473546 UBR3Q6ZT12 1888 aa18.06■□□□□ 0.48
ARF1-205ENST00000473546 KDRP35968 1356 aa18.05■□□□□ 0.48
ARF1-205ENST00000473546 PHKG2P15735 406 aa18.05■□□□□ 0.48
ARF1-205ENST00000473546 SLC15A2Q16348 729 aa18.05■□□□□ 0.48
ARF1-205ENST00000473546 C4BP0C0L5 1744 aa18.05■□□□□ 0.48
ARF1-205ENST00000473546 MPRIPQ6WCQ1 1025 aa18.04■□□□□ 0.48
ARF1-205ENST00000473546 COL5A3P25940 1745 aaPredicted RBP18.03■□□□□ 0.48
ARF1-205ENST00000473546 ZBTB7AO95365 584 aa18.03■□□□□ 0.48
ARF1-205ENST00000473546 NKX1-1Q15270 411 aaPredicted RBP18.03■□□□□ 0.48
ARF1-205ENST00000473546 SULT6B1Q6IMI4 303 aa18.03■□□□□ 0.48
ARF1-205ENST00000473546 STK32BQ9NY57 414 aa18.03■□□□□ 0.48
ARF1-205ENST00000473546 SPG7Q9UQ90 795 aa18.03■□□□□ 0.48
ARF1-205ENST00000473546 ADAMTS7Q9UKP4 1686 aa18.03■□□□□ 0.48
ARF1-205ENST00000473546 AKT1S1Q96B36 256 aa18.02■□□□□ 0.48
ARF1-205ENST00000473546 PALLDQ8WX93 1383 aa18.02■□□□□ 0.47
ARF1-205ENST00000473546 HMOX1P09601 288 aa18.01■□□□□ 0.47
ARF1-205ENST00000473546 PIGBQ92521 554 aa18.01■□□□□ 0.47
ARF1-205ENST00000473546 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.01■□□□□ 0.47
ARF1-205ENST00000473546 TJP1Q07157 1748 aa18■□□□□ 0.47
ARF1-205ENST00000473546 MYH14Q7Z406 1995 aaKnown RBP17.99■□□□□ 0.47
ARF1-205ENST00000473546 ZNF530Q6P9A1 599 aaPredicted RBP17.99■□□□□ 0.47
ARF1-205ENST00000473546 IFNL2Q8IZJ0 200 aa17.99■□□□□ 0.47
ARF1-205ENST00000473546 CCNL1Q9UK58 526 aaPredicted RBP17.99■□□□□ 0.47
ARF1-205ENST00000473546 PLEKHG2Q9H7P9 1386 aa17.99■□□□□ 0.47
ARF1-205ENST00000473546 SIPA1L3O60292 1781 aaPredicted RBP17.99■□□□□ 0.47
ARF1-205ENST00000473546 PNPLA7Q6ZV29 1317 aa17.98■□□□□ 0.47
ARF1-205ENST00000473546 SLC27A3Q5K4L6 730 aa17.98■□□□□ 0.47
ARF1-205ENST00000473546 AMIGO3Q86WK7 504 aa17.98■□□□□ 0.47
ARF1-205ENST00000473546 ATF5Q9Y2D1 282 aaPredicted RBP17.98■□□□□ 0.47
ARF1-205ENST00000473546 PTGER2P43116 358 aa17.97■□□□□ 0.47
ARF1-205ENST00000473546 SMIM5Q71RC9 77 aa17.97■□□□□ 0.47
ARF1-205ENST00000473546 ASAP1Q9ULH1 1129 aa17.97■□□□□ 0.47
ARF1-205ENST00000473546 ZNF831Q5JPB2 1677 aa17.96■□□□□ 0.47
ARF1-205ENST00000473546 DLG5Q8TDM6 1919 aa17.96■□□□□ 0.47
ARF1-205ENST00000473546 DIAPH1O60610 1272 aaKnown RBP17.95■□□□□ 0.46
ARF1-205ENST00000473546 PLEKHO1Q53GL0 409 aaPredicted RBP17.95■□□□□ 0.46
ARF1-205ENST00000473546 SPON1Q9HCB6 807 aa17.95■□□□□ 0.46
ARF1-205ENST00000473546 C4AP0C0L4 1744 aa17.95■□□□□ 0.46
ARF1-205ENST00000473546 PPP2R1AP30153 589 aa17.94■□□□□ 0.46
ARF1-205ENST00000473546 SGIP1Q9BQI5 828 aa17.94■□□□□ 0.46
ARF1-205ENST00000473546 ATG3Q9NT62 314 aa17.94■□□□□ 0.46
ARF1-205ENST00000473546 TMOD3Q9NYL9 352 aa17.94■□□□□ 0.46
ARF1-205ENST00000473546 MRC1P22897 1456 aa17.94■□□□□ 0.46
ARF1-205ENST00000473546 UBR2Q8IWV8 1755 aa17.94■□□□□ 0.46
ARF1-205ENST00000473546 ITPK1Q13572 414 aa17.93■□□□□ 0.46
ARF1-205ENST00000473546 SLC4A9Q96Q91 983 aa17.93■□□□□ 0.46
ARF1-205ENST00000473546 CICQ96RK0 1608 aaPredicted RBP17.93■□□□□ 0.46
ARF1-205ENST00000473546 LINC00116Q8NCU8 138 aa17.92■□□□□ 0.46
ARF1-205ENST00000473546 AMOTQ4VCS5 1084 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 256.7 ms