RNA–Protein interactions for RNA: ENST00000473259.1

UBFD1P1-201, Transcript of ubiquitin family domain containing 1 pseudogene 1, humanhuman

BASIC

Gene UBFD1P1, Length 814 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1P1-201ENST00000473259 GPRASP1Q5JY77 1395 aa8.59□□□□□ -1.03
UBFD1P1-201ENST00000473259 RREB1Q92766 1687 aa8.59□□□□□ -1.03
UBFD1P1-201ENST00000473259 TRPM1Q7Z4N2 1603 aa8.58□□□□□ -1.04
UBFD1P1-201ENST00000473259 NBPF8Q3BBV2 869 aa8.58□□□□□ -1.04
UBFD1P1-201ENST00000473259 FAM163AQ96GL9 167 aaPredicted RBP8.58□□□□□ -1.04
UBFD1P1-201ENST00000473259 TMEM121BQ9BXQ6 578 aaPredicted RBP8.58□□□□□ -1.04
UBFD1P1-201ENST00000473259 WNK3Q9BYP7 1800 aa8.58□□□□□ -1.04
UBFD1P1-201ENST00000473259 POLR3AO14802 1390 aaPredicted RBP8.58□□□□□ -1.04
UBFD1P1-201ENST00000473259 SPATA31A1Q5TZJ5 1347 aa8.57□□□□□ -1.04
UBFD1P1-201ENST00000473259 SBF2Q86WG5 1849 aa8.57□□□□□ -1.04
UBFD1P1-201ENST00000473259 PPIP5K1Q6PFW1 1433 aa8.57□□□□□ -1.04
UBFD1P1-201ENST00000473259 SSH2Q76I76 1423 aa8.57□□□□□ -1.04
UBFD1P1-201ENST00000473259 ZBTB7CA1YPR0 619 aa8.57□□□□□ -1.04
UBFD1P1-201ENST00000473259 TRIM37O94972 964 aa8.57□□□□□ -1.04
UBFD1P1-201ENST00000473259 R3HDM1Q15032 1099 aaKnown RBP8.57□□□□□ -1.04
UBFD1P1-201ENST00000473259 AKAP12Q02952 1782 aa8.57□□□□□ -1.04
UBFD1P1-201ENST00000473259 PEAK1Q9H792 1746 aa8.57□□□□□ -1.04
UBFD1P1-201ENST00000473259 LRRC37A3O60309 1634 aa8.56□□□□□ -1.04
UBFD1P1-201ENST00000473259 SNPHO15079 494 aa8.56□□□□□ -1.04
UBFD1P1-201ENST00000473259 CCDC125Q86Z20 511 aa8.56□□□□□ -1.04
UBFD1P1-201ENST00000473259 MICALL2Q8IY33 904 aa8.56□□□□□ -1.04
UBFD1P1-201ENST00000473259 USP19O94966 1318 aa8.55□□□□□ -1.04
UBFD1P1-201ENST00000473259 PARP4Q9UKK3 1724 aaKnown RBP8.55□□□□□ -1.04
UBFD1P1-201ENST00000473259 PLEKHG3A1L390 1219 aa8.55□□□□□ -1.04
UBFD1P1-201ENST00000473259 L3MBTL2Q969R5 705 aa8.55□□□□□ -1.04
UBFD1P1-201ENST00000473259 SLIT3O75094 1523 aa8.54□□□□□ -1.04
UBFD1P1-201ENST00000473259 COL5A2P05997 1499 aaPredicted RBP8.54□□□□□ -1.04
UBFD1P1-201ENST00000473259 ABTB2Q8N961 1025 aa8.54□□□□□ -1.04
UBFD1P1-201ENST00000473259 CAMKK2Q96RR4 588 aa8.54□□□□□ -1.04
UBFD1P1-201ENST00000473259 CABP1Q9NZU7 370 aa8.54□□□□□ -1.04
UBFD1P1-201ENST00000473259 CENPJQ9HC77 1338 aaPredicted RBP8.54□□□□□ -1.04
UBFD1P1-201ENST00000473259 EIF3AQ14152 1382 aaKnown RBP8.53□□□□□ -1.04
UBFD1P1-201ENST00000473259 BAG6P46379 1132 aa8.53□□□□□ -1.04
UBFD1P1-201ENST00000473259 SRPK2P78362 688 aaKnown RBP8.53□□□□□ -1.04
UBFD1P1-201ENST00000473259 SF3B2Q13435 895 aaKnown RBP8.53□□□□□ -1.04
UBFD1P1-201ENST00000473259 NEUROD1Q13562 356 aa8.53□□□□□ -1.04
UBFD1P1-201ENST00000473259 AXIN2Q9Y2T1 843 aa8.53□□□□□ -1.04
UBFD1P1-201ENST00000473259 USP6P35125 1406 aa8.53□□□□□ -1.04
UBFD1P1-201ENST00000473259 PDGFDQ9GZP0 370 aaPredicted RBP8.52□□□□□ -1.05
UBFD1P1-201ENST00000473259 RYDENQ9NUL5 291 aaKnown RBP8.52□□□□□ -1.05
UBFD1P1-201ENST00000473259 DISP2A7MBM2 1401 aa8.52□□□□□ -1.05
UBFD1P1-201ENST00000473259 APBA3O96018 575 aa8.51□□□□□ -1.05
UBFD1P1-201ENST00000473259 GCP02774 474 aa8.51□□□□□ -1.05
UBFD1P1-201ENST00000473259 MON2Q7Z3U7 1717 aa8.51□□□□□ -1.05
UBFD1P1-201ENST00000473259 CPDO75976 1380 aa8.5□□□□□ -1.05
UBFD1P1-201ENST00000473259 NFAT5O94916 1531 aa8.5□□□□□ -1.05
UBFD1P1-201ENST00000473259 EVA1CP58658 441 aa8.5□□□□□ -1.05
UBFD1P1-201ENST00000473259 ANO8Q9HCE9 1232 aaPredicted RBP8.5□□□□□ -1.05
UBFD1P1-201ENST00000473259 LTN1O94822 1766 aa8.5□□□□□ -1.05
UBFD1P1-201ENST00000473259 RGPD2P0DJD1 1756 aa8.5□□□□□ -1.05
UBFD1P1-201ENST00000473259 CD163L1Q9NR16 1453 aa8.5□□□□□ -1.05
UBFD1P1-201ENST00000473259 CASZ1Q86V15 1759 aa8.49□□□□□ -1.05
UBFD1P1-201ENST00000473259 NKX1-1Q15270 411 aaPredicted RBP8.48□□□□□ -1.05
UBFD1P1-201ENST00000473259 BARGINQ6ZT62 677 aa8.48□□□□□ -1.05
UBFD1P1-201ENST00000473259 TCP11L2Q8N4U5 519 aa8.48□□□□□ -1.05
UBFD1P1-201ENST00000473259 MARCH10Q8NA82 808 aaPredicted RBP8.48□□□□□ -1.05
UBFD1P1-201ENST00000473259 TIMELESSQ9UNS1 1208 aa8.48□□□□□ -1.05
UBFD1P1-201ENST00000473259 TTC21BQ7Z4L5 1316 aa8.48□□□□□ -1.05
UBFD1P1-201ENST00000473259 CRB1P82279 1406 aa8.47□□□□□ -1.05
UBFD1P1-201ENST00000473259 CPSF1Q10570 1443 aaKnown RBP8.47□□□□□ -1.05
UBFD1P1-201ENST00000473259 MYOM1P52179 1685 aa8.47□□□□□ -1.05
UBFD1P1-201ENST00000473259 PPP1R37O75864 691 aa8.47□□□□□ -1.05
UBFD1P1-201ENST00000473259 FBLN1P23142 703 aa8.47□□□□□ -1.05
UBFD1P1-201ENST00000473259 FAM196AQ6ZSG2 479 aa8.47□□□□□ -1.05
UBFD1P1-201ENST00000473259 PDE3BQ13370 1112 aa8.46□□□□□ -1.06
UBFD1P1-201ENST00000473259 NLRP13Q86W25 1043 aa8.46□□□□□ -1.06
UBFD1P1-201ENST00000473259 NME9Q86XW9 330 aa8.46□□□□□ -1.06
UBFD1P1-201ENST00000473259 USP54Q70EL1 1684 aa8.46□□□□□ -1.06
UBFD1P1-201ENST00000473259 ROCK2O75116 1388 aaKnown RBP8.46□□□□□ -1.06
UBFD1P1-201ENST00000473259 AATKQ6ZMQ8 1374 aa8.46□□□□□ -1.06
UBFD1P1-201ENST00000473259 KCNQ2O43526 872 aa8.45□□□□□ -1.06
UBFD1P1-201ENST00000473259 ST18O60284 1047 aa8.45□□□□□ -1.06
UBFD1P1-201ENST00000473259 TMEM92Q6UXU6 159 aa8.45□□□□□ -1.06
UBFD1P1-201ENST00000473259 TOM1L2Q6ZVM7 507 aa8.45□□□□□ -1.06
UBFD1P1-201ENST00000473259 ARHGEF25Q86VW2 580 aa8.45□□□□□ -1.06
UBFD1P1-201ENST00000473259 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.45□□□□□ -1.06
UBFD1P1-201ENST00000473259 STAC3Q96MF2 364 aa8.45□□□□□ -1.06
UBFD1P1-201ENST00000473259 SHANK3Q9BYB0 1731 aa8.45□□□□□ -1.06
UBFD1P1-201ENST00000473259 TUBGCP6Q96RT7 1819 aa8.45□□□□□ -1.06
UBFD1P1-201ENST00000473259 RGPD3A6NKT7 1758 aaPredicted RBP8.44□□□□□ -1.06
UBFD1P1-201ENST00000473259 RGPD4Q7Z3J3 1758 aa8.44□□□□□ -1.06
UBFD1P1-201ENST00000473259 POTEMA6NI47 508 aa8.44□□□□□ -1.06
UBFD1P1-201ENST00000473259 POTEGQ6S5H5 508 aa8.44□□□□□ -1.06
UBFD1P1-201ENST00000473259 PAXIP1Q6ZW49 1069 aaPredicted RBP8.44□□□□□ -1.06
UBFD1P1-201ENST00000473259 BBXQ8WY36 941 aaPredicted RBP8.44□□□□□ -1.06
UBFD1P1-201ENST00000473259 ACSBG1Q96GR2 724 aa8.44□□□□□ -1.06
UBFD1P1-201ENST00000473259 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.44□□□□□ -1.06
UBFD1P1-201ENST00000473259 BTAF1O14981 1849 aa8.44□□□□□ -1.06
UBFD1P1-201ENST00000473259 SBNO2Q9Y2G9 1366 aa8.44□□□□□ -1.06
UBFD1P1-201ENST00000473259 KAT6BQ8WYB5 2073 aa8.44□□□□□ -1.06
UBFD1P1-201ENST00000473259 NHSQ6T4R5 1651 aa8.43□□□□□ -1.06
UBFD1P1-201ENST00000473259 LCE2DQ5TA82 110 aaPredicted RBP8.43□□□□□ -1.06
UBFD1P1-201ENST00000473259 SLC12A5Q9H2X9 1139 aa8.43□□□□□ -1.06
UBFD1P1-201ENST00000473259 EVC2Q86UK5 1308 aa8.43□□□□□ -1.06
UBFD1P1-201ENST00000473259 WDR17Q8IZU2 1322 aa8.43□□□□□ -1.06
UBFD1P1-201ENST00000473259 KTN1Q86UP2 1357 aaKnown RBP8.43□□□□□ -1.06
UBFD1P1-201ENST00000473259 OVOS2A0A0G2JMS6 1433 aa8.43□□□□□ -1.06
UBFD1P1-201ENST00000473259 OVOS2A0A0J9YW53 1432 aa8.43□□□□□ -1.06
UBFD1P1-201ENST00000473259 OVOS2Q6IE36 1432 aa8.43□□□□□ -1.06
UBFD1P1-201ENST00000473259 PAPPAQ13219 1627 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms