RNA–Protein interactions for RNA: ENST00000473252.5

C9orf85-204, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 5

Gene C9orf85, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-204ENST00000473252 NBPF6Q5VWK0 638 aa17.36■□□□□ 0.37
C9orf85-204ENST00000473252 NBPF4Q96M43 638 aa17.36■□□□□ 0.37
C9orf85-204ENST00000473252 POLKQ9UBT6 870 aa17.36■□□□□ 0.37
C9orf85-204ENST00000473252 EMILIN1Q9Y6C2 1016 aa17.36■□□□□ 0.37
C9orf85-204ENST00000473252 NUP188Q5SRE5 1749 aa17.33■□□□□ 0.37
C9orf85-204ENST00000473252 SHANK3Q9BYB0 1731 aa17.33■□□□□ 0.37
C9orf85-204ENST00000473252 NCAPD2Q15021 1401 aa17.33■□□□□ 0.36
C9orf85-204ENST00000473252 ZCRB1Q8TBF4 217 aaKnown RBP17.33■□□□□ 0.36
C9orf85-204ENST00000473252 RAPGEF4Q8WZA2 1011 aa17.33■□□□□ 0.36
C9orf85-204ENST00000473252 KAT6BQ8WYB5 2073 aa17.33■□□□□ 0.36
C9orf85-204ENST00000473252 PPM1GO15355 546 aaPredicted RBP17.32■□□□□ 0.36
C9orf85-204ENST00000473252 TATP17735 454 aaPredicted RBP17.32■□□□□ 0.36
C9orf85-204ENST00000473252 NBPF14Q5TI25 921 aa17.32■□□□□ 0.36
C9orf85-204ENST00000473252 MEGF6O75095 1541 aa17.31■□□□□ 0.36
C9orf85-204ENST00000473252 PLEKHG2Q9H7P9 1386 aa17.31■□□□□ 0.36
C9orf85-204ENST00000473252 PER1O15534 1290 aaPredicted RBP17.31■□□□□ 0.36
C9orf85-204ENST00000473252 MORC1Q86VD1 984 aa17.31■□□□□ 0.36
C9orf85-204ENST00000473252 ZBTB22O15209 634 aa17.3■□□□□ 0.36
C9orf85-204ENST00000473252 AMER1Q5JTC6 1135 aaPredicted RBP17.3■□□□□ 0.36
C9orf85-204ENST00000473252 NPC1L1Q9UHC9 1359 aa17.29■□□□□ 0.36
C9orf85-204ENST00000473252 DDX54Q8TDD1 881 aaKnown RBP17.29■□□□□ 0.36
C9orf85-204ENST00000473252 PKD1L3Q7Z443 1732 aa17.29■□□□□ 0.36
C9orf85-204ENST00000473252 BTAF1O14981 1849 aa17.28■□□□□ 0.36
C9orf85-204ENST00000473252 PCDH11XQ9BZA7 1347 aa17.27■□□□□ 0.36
C9orf85-204ENST00000473252 PCDH11YQ9BZA8 1340 aa17.27■□□□□ 0.36
C9orf85-204ENST00000473252 TNNT2P45379 298 aaPredicted RBP17.27■□□□□ 0.36
C9orf85-204ENST00000473252 USHBP1Q8N6Y0 703 aa17.27■□□□□ 0.36
C9orf85-204ENST00000473252 EYA1Q99502 592 aa17.27■□□□□ 0.36
C9orf85-204ENST00000473252 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.27■□□□□ 0.363e-6■■■■□ 26.5
C9orf85-204ENST00000473252 KCNQ2O43526 872 aa17.26■□□□□ 0.35
C9orf85-204ENST00000473252 PTF1AQ7RTS3 328 aa17.26■□□□□ 0.35
C9orf85-204ENST00000473252 DOT1LQ8TEK3 1739 aa17.26■□□□□ 0.35
C9orf85-204ENST00000473252 LRP5O75197 1615 aa17.25■□□□□ 0.35
C9orf85-204ENST00000473252 EIF4A2Q14240 407 aaKnown RBP17.25■□□□□ 0.35
C9orf85-204ENST00000473252 ACSBG1Q96GR2 724 aa17.25■□□□□ 0.35
C9orf85-204ENST00000473252 R3HDM1Q15032 1099 aaKnown RBP17.24■□□□□ 0.35
C9orf85-204ENST00000473252 TXNRD1Q16881 649 aa17.24■□□□□ 0.35
C9orf85-204ENST00000473252 SPG7Q9UQ90 795 aa17.24■□□□□ 0.35
C9orf85-204ENST00000473252 PSDA5PKW4 1024 aaPredicted RBP17.23■□□□□ 0.35
C9orf85-204ENST00000473252 PROM2Q8N271 834 aa17.23■□□□□ 0.35
C9orf85-204ENST00000473252 IGSF1Q8N6C5 1336 aa17.22■□□□□ 0.35
C9orf85-204ENST00000473252 HMGB2P26583 209 aaKnown RBP17.22■□□□□ 0.35
C9orf85-204ENST00000473252 NKX1-1Q15270 411 aaPredicted RBP17.21■□□□□ 0.35
C9orf85-204ENST00000473252 FOXD4L1Q9NU39 408 aa17.21■□□□□ 0.35
C9orf85-204ENST00000473252 LY75O60449 1722 aa17.21■□□□□ 0.35
C9orf85-204ENST00000473252 PRIM1P49642 420 aaKnown RBP17.2■□□□□ 0.34
C9orf85-204ENST00000473252 SLC27A3Q5K4L6 730 aa17.2■□□□□ 0.34
C9orf85-204ENST00000473252 RNF39Q9H2S5 420 aa17.2■□□□□ 0.34
C9orf85-204ENST00000473252 ITGB4P16144 1822 aa17.19■□□□□ 0.34
C9orf85-204ENST00000473252 CYP27B1O15528 508 aa17.18■□□□□ 0.34
C9orf85-204ENST00000473252 MTHFSP49914 203 aa17.18■□□□□ 0.34
C9orf85-204ENST00000473252 CC2D1BQ5T0F9 858 aaKnown RBP17.18■□□□□ 0.34
C9orf85-204ENST00000473252 IFNL2Q8IZJ0 200 aa17.18■□□□□ 0.34
C9orf85-204ENST00000473252 SYTL4Q96C24 671 aaPredicted RBP17.18■□□□□ 0.34
C9orf85-204ENST00000473252 IL13P35225 146 aa17.17■□□□□ 0.34
C9orf85-204ENST00000473252 AMOTQ4VCS5 1084 aa17.17■□□□□ 0.34
C9orf85-204ENST00000473252 STK32BQ9NY57 414 aa17.17■□□□□ 0.34
C9orf85-204ENST00000473252 U3KPZ7 1027 aaPredicted RBP17.17■□□□□ 0.34
C9orf85-204ENST00000473252 PAPPAQ13219 1627 aa17.17■□□□□ 0.34
C9orf85-204ENST00000473252 SLC15A2Q16348 729 aa17.16■□□□□ 0.34
C9orf85-204ENST00000473252 KDRP35968 1356 aa17.15■□□□□ 0.34
C9orf85-204ENST00000473252 HSP90AB1P08238 724 aaKnown RBP17.15■□□□□ 0.34
C9orf85-204ENST00000473252 PLEKHO1Q53GL0 409 aaPredicted RBP17.15■□□□□ 0.34
C9orf85-204ENST00000473252 QSER1Q2KHR3 1735 aa17.15■□□□□ 0.34
C9orf85-204ENST00000473252 TOGARAM1Q9Y4F4 1720 aa17.15■□□□□ 0.34
C9orf85-204ENST00000473252 CASZ1Q86V15 1759 aa17.15■□□□□ 0.34
C9orf85-204ENST00000473252 PHKG2P15735 406 aa17.14■□□□□ 0.33
C9orf85-204ENST00000473252 ANO8Q9HCE9 1232 aaPredicted RBP17.14■□□□□ 0.33
C9orf85-204ENST00000473252 DIAPH1O60610 1272 aaKnown RBP17.12■□□□□ 0.33
C9orf85-204ENST00000473252 SULT6B1Q6IMI4 303 aa17.12■□□□□ 0.33
C9orf85-204ENST00000473252 SMARCC1Q92922 1105 aaPredicted RBP17.12■□□□□ 0.33
C9orf85-204ENST00000473252 LRRC4BQ9NT99 713 aa17.12■□□□□ 0.33
C9orf85-204ENST00000473252 MPRIPQ6WCQ1 1025 aa17.11■□□□□ 0.33
C9orf85-204ENST00000473252 SPON1Q9HCB6 807 aa17.11■□□□□ 0.33
C9orf85-204ENST00000473252 ERVV-2B6SEH9 535 aa17.09■□□□□ 0.33
C9orf85-204ENST00000473252 CACNB1Q02641 598 aaPredicted RBP17.09■□□□□ 0.33
C9orf85-204ENST00000473252 DCAF5Q96JK2 942 aa17.09■□□□□ 0.33
C9orf85-204ENST00000473252 CCNL1Q9UK58 526 aaPredicted RBP17.09■□□□□ 0.33
C9orf85-204ENST00000473252 TAF1LQ8IZX4 1826 aa17.09■□□□□ 0.33
C9orf85-204ENST00000473252 PALLDQ8WX93 1383 aa17.08■□□□□ 0.32
C9orf85-204ENST00000473252 AEBP1Q8IUX7 1158 aa17.08■□□□□ 0.32
C9orf85-204ENST00000473252 AKT1S1Q96B36 256 aa17.08■□□□□ 0.32
C9orf85-204ENST00000473252 CFAP53Q96M91 514 aa17.08■□□□□ 0.32
C9orf85-204ENST00000473252 TMOD3Q9NYL9 352 aa17.08■□□□□ 0.32
C9orf85-204ENST00000473252 C5P01031 1676 aa17.07■□□□□ 0.32
C9orf85-204ENST00000473252 COL3A1P02461 1466 aaPredicted RBP17.07■□□□□ 0.32
C9orf85-204ENST00000473252 C1orf141Q5JVX7 400 aa17.07■□□□□ 0.32
C9orf85-204ENST00000473252 PIGBQ92521 554 aa17.07■□□□□ 0.32
C9orf85-204ENST00000473252 ZEB1P37275 1124 aaPredicted RBP17.06■□□□□ 0.32
C9orf85-204ENST00000473252 ZNF530Q6P9A1 599 aaPredicted RBP17.06■□□□□ 0.32
C9orf85-204ENST00000473252 SLC16A10Q8TF71 515 aa17.06■□□□□ 0.32
C9orf85-204ENST00000473252 SCN11AQ9UI33 1791 aa17.06■□□□□ 0.32
C9orf85-204ENST00000473252 ZNF831Q5JPB2 1677 aa17.05■□□□□ 0.32
C9orf85-204ENST00000473252 MTFR1LQ9H019 292 aa17.05■□□□□ 0.32
C9orf85-204ENST00000473252 VIRMAQ69YN4 1812 aaKnown RBP17.05■□□□□ 0.32
C9orf85-204ENST00000473252 ZNF827Q17R98 1081 aa17.04■□□□□ 0.32
C9orf85-204ENST00000473252 AKAP4Q5JQC9 854 aa17.04■□□□□ 0.32
C9orf85-204ENST00000473252 TUBGCP6Q96RT7 1819 aa17.04■□□□□ 0.32
C9orf85-204ENST00000473252 PPP2R1AP30153 589 aa17.03■□□□□ 0.32
C9orf85-204ENST00000473252 NUDCQ9Y266 331 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms