RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 MSH6P52701 1360 aa26.16■■□□□ 1.78
COL18A1-207ENST00000473212 ATP10DQ9P241 1426 aa26.16■■□□□ 1.78
COL18A1-207ENST00000473212 SSFA2P28290 1259 aa26.16■■□□□ 1.78
COL18A1-207ENST00000473212 SKOR2Q2VWA4 1001 aaPredicted RBP26.16■■□□□ 1.78
COL18A1-207ENST00000473212 PPP6R1Q9UPN7 881 aa26.15■■□□□ 1.78
COL18A1-207ENST00000473212 AK9Q5TCS8 1911 aa26.15■■□□□ 1.78
COL18A1-207ENST00000473212 INTS3Q68E01 1043 aaKnown RBP26.14■■□□□ 1.78
COL18A1-207ENST00000473212 AKAP12Q02952 1782 aa26.14■■□□□ 1.78
COL18A1-207ENST00000473212 CHL1O00533 1208 aa26.14■■□□□ 1.77
COL18A1-207ENST00000473212 CEP85Q6P2H3 762 aa26.13■■□□□ 1.77
COL18A1-207ENST00000473212 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.13■■□□□ 1.77
COL18A1-207ENST00000473212 ITSN1Q15811 1721 aa26.13■■□□□ 1.77
COL18A1-207ENST00000473212 TTC22Q5TAA0 569 aa26.12■■□□□ 1.77
COL18A1-207ENST00000473212 REREQ9P2R6 1566 aa26.12■■□□□ 1.77
COL18A1-207ENST00000473212 PTMSP20962 102 aa26.12■■□□□ 1.77
COL18A1-207ENST00000473212 G2E3Q7L622 706 aa26.12■■□□□ 1.77
COL18A1-207ENST00000473212 ESF1Q9H501 851 aaKnown RBP26.12■■□□□ 1.77
COL18A1-207ENST00000473212 F6X3S4 739 aa26.11■■□□□ 1.77
COL18A1-207ENST00000473212 ANKRD44Q8N8A2 993 aa26.11■■□□□ 1.77
COL18A1-207ENST00000473212 NAP1L5Q96NT1 182 aaPredicted RBP26.11■■□□□ 1.77
COL18A1-207ENST00000473212 PEAK1Q9H792 1746 aa26.1■■□□□ 1.77
COL18A1-207ENST00000473212 SLC4A2P04920 1241 aa26.09■■□□□ 1.77
COL18A1-207ENST00000473212 TECPR2O15040 1411 aa26.09■■□□□ 1.77
COL18A1-207ENST00000473212 SLC26A8Q96RN1 970 aa26.09■■□□□ 1.77
COL18A1-207ENST00000473212 RTL1A6NKG5 1358 aa26.08■■□□□ 1.77
COL18A1-207ENST00000473212 RIMS1Q86UR5 1692 aaKnown RBP26.08■■□□□ 1.77
COL18A1-207ENST00000473212 ERBB4Q15303 1308 aa26.08■■□□□ 1.77
COL18A1-207ENST00000473212 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.08■■□□□ 1.77
COL18A1-207ENST00000473212 ESPNB1AK53 854 aa26.08■■□□□ 1.76
COL18A1-207ENST00000473212 SDSP20132 328 aa26.08■■□□□ 1.76
COL18A1-207ENST00000473212 LTKP29376 864 aa26.08■■□□□ 1.76
COL18A1-207ENST00000473212 SLC4A10Q6U841 1118 aa26.08■■□□□ 1.76
COL18A1-207ENST00000473212 KIF24Q5T7B8 1368 aa26.08■■□□□ 1.76
COL18A1-207ENST00000473212 NRKQ7Z2Y5 1582 aa26.07■■□□□ 1.76
COL18A1-207ENST00000473212 MAP3K19Q56UN5 1328 aa26.07■■□□□ 1.76
COL18A1-207ENST00000473212 GOLGA6L22H0YM25 854 aa26.06■■□□□ 1.76
COL18A1-207ENST00000473212 RABEP1Q15276 862 aa26.06■■□□□ 1.76
COL18A1-207ENST00000473212 OVOS2A0A0J9YW53 1432 aa26.06■■□□□ 1.76
COL18A1-207ENST00000473212 OVOS2Q6IE36 1432 aa26.06■■□□□ 1.76
COL18A1-207ENST00000473212 BAG4O95429 457 aaKnown RBP26.05■■□□□ 1.76
COL18A1-207ENST00000473212 MTHFSDQ2M296 383 aaKnown RBP26.05■■□□□ 1.76
COL18A1-207ENST00000473212 TSHZ3Q63HK5 1081 aa26.05■■□□□ 1.76
COL18A1-207ENST00000473212 TRIM44Q96DX7 344 aaPredicted RBP26.05■■□□□ 1.76
COL18A1-207ENST00000473212 USP26Q9BXU7 913 aa26.05■■□□□ 1.76
COL18A1-207ENST00000473212 ADAMTS13Q76LX8 1427 aa26.05■■□□□ 1.76
COL18A1-207ENST00000473212 PKP1Q13835 747 aa26.05■■□□□ 1.76
COL18A1-207ENST00000473212 PLPPR3Q6T4P5 718 aa26.05■■□□□ 1.76
COL18A1-207ENST00000473212 CRB1P82279 1406 aa26.04■■□□□ 1.76
COL18A1-207ENST00000473212 CLEC17AQ6ZS10 378 aa26.04■■□□□ 1.76
COL18A1-207ENST00000473212 TMEM2Q9UHN6 1383 aa26.03■■□□□ 1.76
COL18A1-207ENST00000473212 TNRQ92752 1358 aa26.03■■□□□ 1.76
COL18A1-207ENST00000473212 SIRT1Q96EB6 747 aa26.03■■□□□ 1.76
COL18A1-207ENST00000473212 DDX49Q9Y6V7 483 aaKnown RBP26.03■■□□□ 1.76
COL18A1-207ENST00000473212 NECTIN2Q92692 538 aa26.02■■□□□ 1.76
COL18A1-207ENST00000473212 USP6P35125 1406 aa26.02■■□□□ 1.76
COL18A1-207ENST00000473212 RPAP2Q8IXW5 612 aaPredicted RBP26.01■■□□□ 1.75
COL18A1-207ENST00000473212 CEBPAP49715 358 aaPredicted RBP26■■□□□ 1.75
COL18A1-207ENST00000473212 KLHL40Q2TBA0 621 aa26■■□□□ 1.75
COL18A1-207ENST00000473212 TSPYL4Q9UJ04 414 aa26■■□□□ 1.75
COL18A1-207ENST00000473212 UBE2Q2Q8WVN8 375 aa25.99■■□□□ 1.75
COL18A1-207ENST00000473212 CHAMP1Q96JM3 812 aa25.99■■□□□ 1.75
COL18A1-207ENST00000473212 KIAA0232Q92628 1395 aa25.99■■□□□ 1.75
COL18A1-207ENST00000473212 PLEKHG3A1L390 1219 aa25.98■■□□□ 1.75
COL18A1-207ENST00000473212 MCTP1Q6DN14 999 aa25.98■■□□□ 1.75
COL18A1-207ENST00000473212 EXOC6BQ9Y2D4 811 aa25.97■■□□□ 1.75
COL18A1-207ENST00000473212 PTPRUQ92729 1446 aa25.97■■□□□ 1.75
COL18A1-207ENST00000473212 KIF13AQ9H1H9 1805 aa25.97■■□□□ 1.75
COL18A1-207ENST00000473212 ZGPATQ8N5A5 531 aaKnown RBP25.97■■□□□ 1.75
COL18A1-207ENST00000473212 PTPRCP08575 1304 aa25.97■■□□□ 1.75
COL18A1-207ENST00000473212 HDGFP51858 240 aaKnown RBP25.96■■□□□ 1.75
COL18A1-207ENST00000473212 NUTM2GQ5VZR2 741 aa25.96■■□□□ 1.75
COL18A1-207ENST00000473212 RGPD1P0DJD0 1748 aa25.96■■□□□ 1.75
COL18A1-207ENST00000473212 NASPP49321 788 aaPredicted RBP25.96■■□□□ 1.75
COL18A1-207ENST00000473212 NUCB2P80303 420 aa25.95■■□□□ 1.75
COL18A1-207ENST00000473212 UBR1Q8IWV7 1749 aa25.95■■□□□ 1.74
COL18A1-207ENST00000473212 EYA1Q99502 592 aa25.95■■□□□ 1.74
COL18A1-207ENST00000473212 HAP1P54257 671 aaPredicted RBP25.94■■□□□ 1.74
COL18A1-207ENST00000473212 CASC1Q6TDU7 716 aa25.94■■□□□ 1.74
COL18A1-207ENST00000473212 CYP2E1P05181 493 aaPredicted RBP25.93■■□□□ 1.74
COL18A1-207ENST00000473212 CEP170BQ9Y4F5 1589 aaPredicted RBP25.93■■□□□ 1.74
COL18A1-207ENST00000473212 USP31Q70CQ4 1352 aa25.93■■□□□ 1.74
COL18A1-207ENST00000473212 TOPAZ1Q8N9V7 1692 aa25.93■■□□□ 1.74
COL18A1-207ENST00000473212 RTF1Q92541 710 aaKnown RBP25.93■■□□□ 1.74
COL18A1-207ENST00000473212 NCLP19338 710 aaKnown RBP25.92■■□□□ 1.74
COL18A1-207ENST00000473212 CCDC173Q0VFZ6 552 aa25.92■■□□□ 1.74
COL18A1-207ENST00000473212 IBTKQ9P2D0 1353 aaPredicted RBP25.92■■□□□ 1.74
COL18A1-207ENST00000473212 NALCNQ8IZF0 1738 aa25.91■■□□□ 1.74
COL18A1-207ENST00000473212 ST18O60284 1047 aa25.91■■□□□ 1.74
COL18A1-207ENST00000473212 SSH2Q76I76 1423 aa25.91■■□□□ 1.74
COL18A1-207ENST00000473212 PDE1AP54750 535 aa25.9■■□□□ 1.74
COL18A1-207ENST00000473212 CAVIN1Q6NZI2 390 aaKnown RBP25.9■■□□□ 1.74
COL18A1-207ENST00000473212 LMBRD1Q9NUN5 540 aa25.9■■□□□ 1.74
COL18A1-207ENST00000473212 PNMA6EA0A0J9YXQ4 647 aa25.9■■□□□ 1.74
COL18A1-207ENST00000473212 AMOTL2Q9Y2J4 779 aa25.9■■□□□ 1.74
COL18A1-207ENST00000473212 AMPHP49418 695 aa25.89■■□□□ 1.74
COL18A1-207ENST00000473212 PPP1R9BQ96SB3 815 aa25.89■■□□□ 1.74
COL18A1-207ENST00000473212 NGDNQ8NEJ9 315 aaKnown RBP25.89■■□□□ 1.73
COL18A1-207ENST00000473212 CWC22Q9HCG8 908 aaKnown RBP25.88■■□□□ 1.73
COL18A1-207ENST00000473212 RGPD8O14715 1765 aaPredicted RBP25.88■■□□□ 1.73
COL18A1-207ENST00000473212 REC8O95072 547 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms