RNA–Protein interactions for RNA: ENST00000473062.1

CLCC1-208, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-208ENST00000473062 RASA1P20936 1047 aa6.39□□□□□ -1.39
CLCC1-208ENST00000473062 WDR4P57081 412 aaKnown RBP6.39□□□□□ -1.39
CLCC1-208ENST00000473062 GTF2IP78347 998 aa6.39□□□□□ -1.39
CLCC1-208ENST00000473062 ELOAQ14241 798 aaKnown RBP6.39□□□□□ -1.39
CLCC1-208ENST00000473062 B4GALNT3Q6L9W6 998 aa6.39□□□□□ -1.39
CLCC1-208ENST00000473062 IRX2Q9BZI1 471 aaPredicted RBP6.39□□□□□ -1.39
CLCC1-208ENST00000473062 DNAAF2Q9NVR5 837 aaKnown RBP6.39□□□□□ -1.39
CLCC1-208ENST00000473062 FAM187AA6NFU0 413 aa6.38□□□□□ -1.39
CLCC1-208ENST00000473062 ZIC2O95409 532 aaPredicted RBP6.38□□□□□ -1.39
CLCC1-208ENST00000473062 GNRH1P01148 92 aa6.38□□□□□ -1.39
CLCC1-208ENST00000473062 SMPD1P17405 629 aa6.38□□□□□ -1.39
CLCC1-208ENST00000473062 ZNF784Q8NCA9 323 aaPredicted RBP6.38□□□□□ -1.39
CLCC1-208ENST00000473062 USTQ9Y2C2 406 aa6.38□□□□□ -1.39
CLCC1-208ENST00000473062 J3QL48 77 aa6.37□□□□□ -1.39
CLCC1-208ENST00000473062 BACH1O14867 736 aa6.37□□□□□ -1.39
CLCC1-208ENST00000473062 NR3C2P08235 984 aa6.37□□□□□ -1.39
CLCC1-208ENST00000473062 GTF2E1P29083 439 aaPredicted RBP6.37□□□□□ -1.39
CLCC1-208ENST00000473062 TRIM67Q6ZTA4 783 aa6.37□□□□□ -1.39
CLCC1-208ENST00000473062 DEPDC4Q8N2C3 294 aa6.37□□□□□ -1.39
CLCC1-208ENST00000473062 OGFOD1Q8N543 542 aa6.37□□□□□ -1.39
CLCC1-208ENST00000473062 CYLDQ9NQC7 956 aa6.37□□□□□ -1.39
CLCC1-208ENST00000473062 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.36□□□□□ -1.39
CLCC1-208ENST00000473062 USP17L15C9J2P7 530 aa6.36□□□□□ -1.39
CLCC1-208ENST00000473062 USP17L10C9JJH3 530 aa6.36□□□□□ -1.39
CLCC1-208ENST00000473062 USP17L13C9JLJ4 530 aa6.36□□□□□ -1.39
CLCC1-208ENST00000473062 USP17L12C9JPN9 530 aa6.36□□□□□ -1.39
CLCC1-208ENST00000473062 USP17L11C9JVI0 530 aa6.36□□□□□ -1.39
CLCC1-208ENST00000473062 USP17L21D6R901 530 aa6.36□□□□□ -1.39
CLCC1-208ENST00000473062 USP17L18D6R9N7 530 aa6.36□□□□□ -1.39
CLCC1-208ENST00000473062 USP17L22D6RA61 530 aa6.36□□□□□ -1.39
CLCC1-208ENST00000473062 USP17L17D6RBQ6 530 aa6.36□□□□□ -1.39
CLCC1-208ENST00000473062 USP17L19D6RCP7 530 aa6.36□□□□□ -1.39
CLCC1-208ENST00000473062 USP17L20D6RJB6 530 aa6.36□□□□□ -1.39
CLCC1-208ENST00000473062 GFRA3O60609 400 aa6.36□□□□□ -1.39
CLCC1-208ENST00000473062 ADH1AP07327 375 aa6.36□□□□□ -1.39
CLCC1-208ENST00000473062 USP17L24Q0WX57 530 aa6.36□□□□□ -1.39
CLCC1-208ENST00000473062 SCARF1Q14162 830 aa6.36□□□□□ -1.39
CLCC1-208ENST00000473062 SIX5Q8N196 739 aa6.36□□□□□ -1.39
CLCC1-208ENST00000473062 TSEN34Q9BSV6 310 aaKnown RBP6.36□□□□□ -1.39
CLCC1-208ENST00000473062 PATL2C9JE40 543 aaKnown RBP6.35□□□□□ -1.39
CLCC1-208ENST00000473062 M0R2N6 131 aa6.35□□□□□ -1.39
CLCC1-208ENST00000473062 WASLO00401 505 aaPredicted RBP6.35□□□□□ -1.39
CLCC1-208ENST00000473062 CAPN5O15484 640 aaPredicted RBP6.35□□□□□ -1.39
CLCC1-208ENST00000473062 AVPP01185 164 aa6.35□□□□□ -1.39
CLCC1-208ENST00000473062 TIMP2P16035 220 aa6.35□□□□□ -1.39
CLCC1-208ENST00000473062 KANK4Q5T7N3 995 aaPredicted RBP6.35□□□□□ -1.39
CLCC1-208ENST00000473062 Q6ZVU0 165 aa6.35□□□□□ -1.39
CLCC1-208ENST00000473062 NBPF15Q8N660 670 aa6.35□□□□□ -1.39
CLCC1-208ENST00000473062 FAM200AQ8TCP9 573 aa6.35□□□□□ -1.39
CLCC1-208ENST00000473062 NLRP3Q96P20 1036 aa6.35□□□□□ -1.39
CLCC1-208ENST00000473062 CDCA7Q9BWT1 371 aaPredicted RBP6.35□□□□□ -1.39
CLCC1-208ENST00000473062 SMCPP49901 116 aaPredicted RBP6.34□□□□□ -1.39
CLCC1-208ENST00000473062 SEC13P55735 322 aa6.34□□□□□ -1.39
CLCC1-208ENST00000473062 SWI5Q1ZZU3 235 aa6.34□□□□□ -1.39
CLCC1-208ENST00000473062 CCDC102BQ68D86 513 aa6.34□□□□□ -1.39
CLCC1-208ENST00000473062 ANKMY2Q8IV38 441 aa6.34□□□□□ -1.39
CLCC1-208ENST00000473062 MEIOBQ8N635 442 aa6.34□□□□□ -1.39
CLCC1-208ENST00000473062 ITPKCQ96DU7 683 aa6.34□□□□□ -1.39
CLCC1-208ENST00000473062 TMPRSS4Q9NRS4 437 aa6.34□□□□□ -1.39
CLCC1-208ENST00000473062 NOVA2Q9UNW9 492 aaKnown RBP6.34□□□□□ -1.39
CLCC1-208ENST00000473062 LILRA1O75019 489 aa6.33□□□□□ -1.4
CLCC1-208ENST00000473062 PTK7Q13308 1070 aa6.33□□□□□ -1.4
CLCC1-208ENST00000473062 CRIPAKQ8N1N5 446 aa6.33□□□□□ -1.4
CLCC1-208ENST00000473062 TPCN2Q8NHX9 752 aa6.33□□□□□ -1.4
CLCC1-208ENST00000473062 ZNF594Q96JF6 807 aaPredicted RBP6.33□□□□□ -1.4
CLCC1-208ENST00000473062 OSBPL3Q9H4L5 887 aa6.33□□□□□ -1.4
CLCC1-208ENST00000473062 AXIN1O15169 862 aa6.32□□□□□ -1.4
CLCC1-208ENST00000473062 GPC1P35052 558 aa6.32□□□□□ -1.4
CLCC1-208ENST00000473062 SCTRP47872 440 aa6.32□□□□□ -1.4
CLCC1-208ENST00000473062 GDF10P55107 478 aa6.32□□□□□ -1.4
CLCC1-208ENST00000473062 HPS1Q92902 700 aa6.32□□□□□ -1.4
CLCC1-208ENST00000473062 KLF16Q9BXK1 252 aaPredicted RBP6.32□□□□□ -1.4
CLCC1-208ENST00000473062 CHMP3Q9Y3E7 222 aa6.32□□□□□ -1.4
CLCC1-208ENST00000473062 PCDHGA11Q9Y5H2 935 aa6.32□□□□□ -1.4
CLCC1-208ENST00000473062 PDIA4P13667 645 aaKnown RBP6.31□□□□□ -1.4
CLCC1-208ENST00000473062 PTGIRP43119 386 aa6.31□□□□□ -1.4
CLCC1-208ENST00000473062 SRPK2P78362 688 aaKnown RBP6.31□□□□□ -1.4
CLCC1-208ENST00000473062 CLDN10P78369 228 aa6.31□□□□□ -1.4
CLCC1-208ENST00000473062 CLN3Q13286 438 aa6.31□□□□□ -1.4
CLCC1-208ENST00000473062 MTMR7Q9Y216 660 aa6.31□□□□□ -1.4
CLCC1-208ENST00000473062 INHAP05111 366 aa6.3□□□□□ -1.4
CLCC1-208ENST00000473062 DPYDQ12882 1025 aa6.3□□□□□ -1.4
CLCC1-208ENST00000473062 TSGA10IPQ3SY00 556 aa6.3□□□□□ -1.4
CLCC1-208ENST00000473062 CRTC2Q53ET0 693 aaPredicted RBP6.3□□□□□ -1.4
CLCC1-208ENST00000473062 LINC00528Q8N1L1 170 aa6.3□□□□□ -1.4
CLCC1-208ENST00000473062 GAS2L2Q8NHY3 880 aa6.3□□□□□ -1.4
CLCC1-208ENST00000473062 ESYT1Q9BSJ8 1104 aa6.3□□□□□ -1.4
CLCC1-208ENST00000473062 ZFAND3Q9H8U3 227 aa6.3□□□□□ -1.4
CLCC1-208ENST00000473062 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.3□□□□□ -1.42e-12■■■■■ 97.8
CLCC1-208ENST00000473062 BMP2P12643 396 aa6.29□□□□□ -1.4
CLCC1-208ENST00000473062 GNASQ5JWF2 1037 aa6.29□□□□□ -1.4
CLCC1-208ENST00000473062 MRPL14Q6P1L8 145 aaKnown RBP6.29□□□□□ -1.4
CLCC1-208ENST00000473062 KIFC2Q96AC6 838 aa6.29□□□□□ -1.4
CLCC1-208ENST00000473062 SENP2Q9HC62 589 aa6.29□□□□□ -1.4
CLCC1-208ENST00000473062 ARHGEF10LQ9HCE6 1279 aa6.29□□□□□ -1.4
CLCC1-208ENST00000473062 A0A1W2PRU2 124 aa6.28□□□□□ -1.4
CLCC1-208ENST00000473062 MEN1O00255 615 aa6.28□□□□□ -1.4
CLCC1-208ENST00000473062 SPINT1O43278 529 aa6.28□□□□□ -1.4
CLCC1-208ENST00000473062 RELBQ01201 579 aa6.28□□□□□ -1.4
CLCC1-208ENST00000473062 CBLBQ13191 982 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms