RNA–Protein interactions for RNA: ENST00000472827.1

LMBRD1-203, Transcript of LMBR1 domain containing 1, humanhuman

TSL 5

Gene LMBRD1, Length 1,861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBRD1-203ENST00000472827 HMGB2P26583 209 aaKnown RBP13.67□□□□□ -0.22
LMBRD1-203ENST00000472827 POLD1P28340 1107 aa13.67□□□□□ -0.22
LMBRD1-203ENST00000472827 DDX54Q8TDD1 881 aaKnown RBP13.67□□□□□ -0.22
LMBRD1-203ENST00000472827 TESK2Q96S53 571 aa13.67□□□□□ -0.22
LMBRD1-203ENST00000472827 CD163L1Q9NR16 1453 aa13.67□□□□□ -0.22
LMBRD1-203ENST00000472827 ANKRD36BQ8N2N9 1353 aa13.67□□□□□ -0.22
LMBRD1-203ENST00000472827 SLC16A10Q8TF71 515 aa13.67□□□□□ -0.22
LMBRD1-203ENST00000472827 AKT1S1Q96B36 256 aa13.67□□□□□ -0.22
LMBRD1-203ENST00000472827 AMPHP49418 695 aa13.66□□□□□ -0.22
LMBRD1-203ENST00000472827 IP6K1Q92551 441 aa13.66□□□□□ -0.22
LMBRD1-203ENST00000472827 USP47Q96K76 1375 aa13.66□□□□□ -0.22
LMBRD1-203ENST00000472827 GIGYF1O75420 1035 aaPredicted RBP13.65□□□□□ -0.22
LMBRD1-203ENST00000472827 SLC27A3Q5K4L6 730 aa13.65□□□□□ -0.22
LMBRD1-203ENST00000472827 TFCP2L1Q9NZI6 479 aa13.65□□□□□ -0.22
LMBRD1-203ENST00000472827 KCNQ4P56696 695 aa13.65□□□□□ -0.22
LMBRD1-203ENST00000472827 SYTL4Q96C24 671 aaPredicted RBP13.65□□□□□ -0.22
LMBRD1-203ENST00000472827 LTV1Q96GA3 475 aaPredicted RBP13.65□□□□□ -0.22
LMBRD1-203ENST00000472827 QSER1Q2KHR3 1735 aa13.65□□□□□ -0.22
LMBRD1-203ENST00000472827 PNPLA7Q6ZV29 1317 aa13.64□□□□□ -0.23
LMBRD1-203ENST00000472827 SMG6Q86US8 1419 aaKnown RBP13.64□□□□□ -0.23
LMBRD1-203ENST00000472827 RTL1A6NKG5 1358 aa13.64□□□□□ -0.23
LMBRD1-203ENST00000472827 TUBGCP6Q96RT7 1819 aa13.63□□□□□ -0.23
LMBRD1-203ENST00000472827 NLGN2Q8NFZ4 835 aa13.63□□□□□ -0.23
LMBRD1-203ENST00000472827 PRIM1P49642 420 aaKnown RBP13.62□□□□□ -0.23
LMBRD1-203ENST00000472827 CGNL1Q0VF96 1302 aa13.62□□□□□ -0.23
LMBRD1-203ENST00000472827 COL24A1Q17RW2 1714 aa13.61□□□□□ -0.23
LMBRD1-203ENST00000472827 FAM208AQ9UK61 1670 aaKnown RBP13.61□□□□□ -0.23
LMBRD1-203ENST00000472827 KIF24Q5T7B8 1368 aa13.61□□□□□ -0.23
LMBRD1-203ENST00000472827 DOT1LQ8TEK3 1739 aa13.6□□□□□ -0.23
LMBRD1-203ENST00000472827 HOXC9P31274 260 aa13.59□□□□□ -0.23
LMBRD1-203ENST00000472827 LY75O60449 1722 aa13.59□□□□□ -0.23
LMBRD1-203ENST00000472827 GOLGB1Q14789 3259 aaKnown RBP13.59□□□□□ -0.23
LMBRD1-203ENST00000472827 SHANK3Q9BYB0 1731 aa13.59□□□□□ -0.23
LMBRD1-203ENST00000472827 MAP3K19Q56UN5 1328 aa13.58□□□□□ -0.23
LMBRD1-203ENST00000472827 GRIN3BO60391 1043 aa13.58□□□□□ -0.24
LMBRD1-203ENST00000472827 RAPGEF4Q8WZA2 1011 aa13.58□□□□□ -0.24
LMBRD1-203ENST00000472827 CCNL1Q9UK58 526 aaPredicted RBP13.58□□□□□ -0.24
LMBRD1-203ENST00000472827 RGPD2P0DJD1 1756 aa13.57□□□□□ -0.24
LMBRD1-203ENST00000472827 YBX3P16989 372 aaKnown RBP eCLIP13.57□□□□□ -0.24
LMBRD1-203ENST00000472827 ZCRB1Q8TBF4 217 aaKnown RBP13.57□□□□□ -0.24
LMBRD1-203ENST00000472827 FYB1O15117 783 aa13.57□□□□□ -0.24
LMBRD1-203ENST00000472827 MSL1Q68DK7 614 aa13.57□□□□□ -0.24
LMBRD1-203ENST00000472827 PCGF6Q9BYE7 350 aa13.57□□□□□ -0.24
LMBRD1-203ENST00000472827 IFFO2Q5TF58 517 aa13.56□□□□□ -0.24
LMBRD1-203ENST00000472827 COL23A1Q86Y22 540 aaPredicted RBP13.56□□□□□ -0.24
LMBRD1-203ENST00000472827 NSD2O96028 1365 aa13.56□□□□□ -0.24
LMBRD1-203ENST00000472827 TATP17735 454 aaPredicted RBP13.55□□□□□ -0.24
LMBRD1-203ENST00000472827 FBLN1P23142 703 aa13.55□□□□□ -0.24
LMBRD1-203ENST00000472827 GGNBP2Q9H3C7 697 aa13.55□□□□□ -0.24
LMBRD1-203ENST00000472827 FLT4P35916 1363 aa13.55□□□□□ -0.24
LMBRD1-203ENST00000472827 PPP4R3CPQ6ZMV5 832 aa13.54□□□□□ -0.24
LMBRD1-203ENST00000472827 INSRP06213 1382 aa13.54□□□□□ -0.24
LMBRD1-203ENST00000472827 MEGF6O75095 1541 aa13.54□□□□□ -0.24
LMBRD1-203ENST00000472827 EIF4G2P78344 907 aaKnown RBP eCLIP13.53□□□□□ -0.24
LMBRD1-203ENST00000472827 ATP10DQ9P241 1426 aa13.52□□□□□ -0.25
LMBRD1-203ENST00000472827 USHBP1Q8N6Y0 703 aa13.52□□□□□ -0.25
LMBRD1-203ENST00000472827 PCDH11XQ9BZA7 1347 aa13.51□□□□□ -0.25
LMBRD1-203ENST00000472827 PCDH11YQ9BZA8 1340 aa13.51□□□□□ -0.25
LMBRD1-203ENST00000472827 RRS1Q15050 365 aaKnown RBP13.51□□□□□ -0.25
LMBRD1-203ENST00000472827 CCER1Q8TC90 406 aaPredicted RBP13.51□□□□□ -0.25
LMBRD1-203ENST00000472827 NSD3Q9BZ95 1437 aa13.51□□□□□ -0.25
LMBRD1-203ENST00000472827 NBPF6Q5VWK0 638 aa13.5□□□□□ -0.25
LMBRD1-203ENST00000472827 ZNF526Q8TF50 670 aaPredicted RBP13.5□□□□□ -0.25
LMBRD1-203ENST00000472827 NBPF4Q96M43 638 aa13.5□□□□□ -0.25
LMBRD1-203ENST00000472827 GPBP1L1Q9HC44 474 aaPredicted RBP13.5□□□□□ -0.25
LMBRD1-203ENST00000472827 RNF216Q9NWF9 866 aaPredicted RBP13.5□□□□□ -0.25
LMBRD1-203ENST00000472827 C5P01031 1676 aa13.5□□□□□ -0.25
LMBRD1-203ENST00000472827 CEP350Q5VT06 3117 aa13.5□□□□□ -0.25
LMBRD1-203ENST00000472827 CD2APQ9Y5K6 639 aa13.5□□□□□ -0.25
LMBRD1-203ENST00000472827 FLAD1Q8NFF5 587 aa13.49□□□□□ -0.25
LMBRD1-203ENST00000472827 CNKSR2Q8WXI2 1034 aa13.48□□□□□ -0.25
LMBRD1-203ENST00000472827 SPG7Q9UQ90 795 aa13.48□□□□□ -0.25
LMBRD1-203ENST00000472827 TAF1LQ8IZX4 1826 aa13.48□□□□□ -0.25
LMBRD1-203ENST00000472827 MPRIPQ6WCQ1 1025 aa13.48□□□□□ -0.25
LMBRD1-203ENST00000472827 POLR3GLQ9BT43 218 aa13.48□□□□□ -0.25
LMBRD1-203ENST00000472827 WWC3Q9ULE0 1092 aa13.48□□□□□ -0.25
LMBRD1-203ENST00000472827 KIF20BQ96Q89 1820 aa13.47□□□□□ -0.25
LMBRD1-203ENST00000472827 SMARCC1Q92922 1105 aaPredicted RBP13.47□□□□□ -0.25
LMBRD1-203ENST00000472827 PALLDQ8WX93 1383 aa13.47□□□□□ -0.25
LMBRD1-203ENST00000472827 PLEKHG2Q9H7P9 1386 aa13.47□□□□□ -0.25
LMBRD1-203ENST00000472827 PPM1GO15355 546 aaPredicted RBP13.46□□□□□ -0.25
LMBRD1-203ENST00000472827 HSP90AB2PQ58FF8 381 aa13.46□□□□□ -0.25
LMBRD1-203ENST00000472827 AK7Q96M32 723 aa13.46□□□□□ -0.26
LMBRD1-203ENST00000472827 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.46□□□□□ -0.262e-6■■■■□ 21.4
LMBRD1-203ENST00000472827 WASHC2AQ641Q2 1341 aa13.45□□□□□ -0.26
LMBRD1-203ENST00000472827 PHF14O94880 888 aa13.45□□□□□ -0.26
LMBRD1-203ENST00000472827 HSPA6P17066 643 aa13.45□□□□□ -0.26
LMBRD1-203ENST00000472827 CARD14Q9BXL6 1004 aa13.45□□□□□ -0.26
LMBRD1-203ENST00000472827 ITGB4P16144 1822 aa13.44□□□□□ -0.26
LMBRD1-203ENST00000472827 SMIM5Q71RC9 77 aa13.44□□□□□ -0.26
LMBRD1-203ENST00000472827 IGSF1Q8N6C5 1336 aa13.44□□□□□ -0.26
LMBRD1-203ENST00000472827 C4BP0C0L5 1744 aa13.44□□□□□ -0.26
LMBRD1-203ENST00000472827 ADCY9O60503 1353 aa13.44□□□□□ -0.26
LMBRD1-203ENST00000472827 AMIGO3Q86WK7 504 aa13.43□□□□□ -0.26
LMBRD1-203ENST00000472827 UBR3Q6ZT12 1888 aa13.42□□□□□ -0.26
LMBRD1-203ENST00000472827 CYP27B1O15528 508 aa13.42□□□□□ -0.26
LMBRD1-203ENST00000472827 EMILIN1Q9Y6C2 1016 aa13.42□□□□□ -0.26
LMBRD1-203ENST00000472827 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.42□□□□□ -0.26
LMBRD1-203ENST00000472827 TOGARAM1Q9Y4F4 1720 aa13.41□□□□□ -0.26
LMBRD1-203ENST00000472827 HSP90AB1P08238 724 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms