RNA–Protein interactions for RNA: ENST00000472608.5

ABCF3-209, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 657 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-209ENST00000472608 ANKRD24Q8TF21 1146 aa19.9■□□□□ 0.78
ABCF3-209ENST00000472608 KTN1Q86UP2 1357 aaKnown RBP19.9■□□□□ 0.78
ABCF3-209ENST00000472608 USP54Q70EL1 1684 aa19.9■□□□□ 0.78
ABCF3-209ENST00000472608 TUBGCP6Q96RT7 1819 aa19.89■□□□□ 0.77
ABCF3-209ENST00000472608 ADCY9O60503 1353 aa19.88■□□□□ 0.77
ABCF3-209ENST00000472608 HSPA5P11021 654 aaKnown RBP19.87■□□□□ 0.77
ABCF3-209ENST00000472608 NSD2O96028 1365 aa19.86■□□□□ 0.77
ABCF3-209ENST00000472608 ANKRD36BQ8N2N9 1353 aa19.86■□□□□ 0.77
ABCF3-209ENST00000472608 KCNQ4P56696 695 aa19.86■□□□□ 0.77
ABCF3-209ENST00000472608 GPBP1L1Q9HC44 474 aaPredicted RBP19.86■□□□□ 0.77
ABCF3-209ENST00000472608 LY75O60449 1722 aa19.85■□□□□ 0.77
ABCF3-209ENST00000472608 MON2Q7Z3U7 1717 aa19.85■□□□□ 0.77
ABCF3-209ENST00000472608 PRIM1P49642 420 aaKnown RBP19.84■□□□□ 0.77
ABCF3-209ENST00000472608 COL23A1Q86Y22 540 aaPredicted RBP19.84■□□□□ 0.77
ABCF3-209ENST00000472608 DDX54Q8TDD1 881 aaKnown RBP19.84■□□□□ 0.77
ABCF3-209ENST00000472608 CD2APQ9Y5K6 639 aa19.84■□□□□ 0.77
ABCF3-209ENST00000472608 NME9Q86XW9 330 aa19.82■□□□□ 0.76
ABCF3-209ENST00000472608 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.82■□□□□ 0.76
ABCF3-209ENST00000472608 SLC12A5Q9H2X9 1139 aa19.82■□□□□ 0.76
ABCF3-209ENST00000472608 LTN1O94822 1766 aa19.82■□□□□ 0.76
ABCF3-209ENST00000472608 CD163L1Q9NR16 1453 aa19.81■□□□□ 0.76
ABCF3-209ENST00000472608 TMC1Q8TDI8 760 aa19.81■□□□□ 0.76
ABCF3-209ENST00000472608 TERF2IPQ9NYB0 399 aa19.81■□□□□ 0.76
ABCF3-209ENST00000472608 HDGFL2Q7Z4V5 671 aaPredicted RBP19.8■□□□□ 0.76
ABCF3-209ENST00000472608 IP6K1Q92551 441 aa19.8■□□□□ 0.76
ABCF3-209ENST00000472608 CCNL1Q9UK58 526 aaPredicted RBP19.8■□□□□ 0.76
ABCF3-209ENST00000472608 SYTL4Q96C24 671 aaPredicted RBP19.79■□□□□ 0.76
ABCF3-209ENST00000472608 MSH5O43196 834 aa19.76■□□□□ 0.75
ABCF3-209ENST00000472608 ZEB1P37275 1124 aaPredicted RBP19.76■□□□□ 0.75
ABCF3-209ENST00000472608 DOT1LQ8TEK3 1739 aa19.76■□□□□ 0.75
ABCF3-209ENST00000472608 FAM208AQ9UK61 1670 aaKnown RBP19.75■□□□□ 0.75
ABCF3-209ENST00000472608 KIF3CO14782 793 aa19.75■□□□□ 0.75
ABCF3-209ENST00000472608 MSL1Q68DK7 614 aa19.75■□□□□ 0.75
ABCF3-209ENST00000472608 FLAD1Q8NFF5 587 aa19.75■□□□□ 0.75
ABCF3-209ENST00000472608 ZCRB1Q8TBF4 217 aaKnown RBP19.75■□□□□ 0.75
ABCF3-209ENST00000472608 EDC4Q6P2E9 1401 aaKnown RBP19.75■□□□□ 0.75
ABCF3-209ENST00000472608 A0A1W2PP64 1363 aa19.74■□□□□ 0.75
ABCF3-209ENST00000472608 HMGB2P26583 209 aaKnown RBP19.74■□□□□ 0.75
ABCF3-209ENST00000472608 ZNF526Q8TF50 670 aaPredicted RBP19.73■□□□□ 0.75
ABCF3-209ENST00000472608 DNAJC5GQ8N7S2 189 aa19.71■□□□□ 0.75
ABCF3-209ENST00000472608 APLP1P51693 650 aa19.7■□□□□ 0.74
ABCF3-209ENST00000472608 LTV1Q96GA3 475 aaPredicted RBP19.7■□□□□ 0.74
ABCF3-209ENST00000472608 MEGF6O75095 1541 aa19.7■□□□□ 0.74
ABCF3-209ENST00000472608 HOXC9P31274 260 aa19.68■□□□□ 0.74
ABCF3-209ENST00000472608 CGNL1Q0VF96 1302 aa19.68■□□□□ 0.74
ABCF3-209ENST00000472608 IGSF1Q8N6C5 1336 aa19.68■□□□□ 0.74
ABCF3-209ENST00000472608 C5P01031 1676 aa19.68■□□□□ 0.74
ABCF3-209ENST00000472608 MAP3K19Q56UN5 1328 aa19.67■□□□□ 0.74
ABCF3-209ENST00000472608 KIF7Q2M1P5 1343 aa19.65■□□□□ 0.74
ABCF3-209ENST00000472608 CICQ96RK0 1608 aaPredicted RBP19.65■□□□□ 0.74
ABCF3-209ENST00000472608 TOMM70O94826 608 aa19.64■□□□□ 0.73
ABCF3-209ENST00000472608 AMIGO3Q86WK7 504 aa19.64■□□□□ 0.73
ABCF3-209ENST00000472608 POLR3GLQ9BT43 218 aa19.64■□□□□ 0.73
ABCF3-209ENST00000472608 TAF1LQ8IZX4 1826 aa19.64■□□□□ 0.73
ABCF3-209ENST00000472608 PALLDQ8WX93 1383 aa19.63■□□□□ 0.73
ABCF3-209ENST00000472608 CARD14Q9BXL6 1004 aa19.63■□□□□ 0.73
ABCF3-209ENST00000472608 NBPF6Q5VWK0 638 aa19.62■□□□□ 0.73
ABCF3-209ENST00000472608 NBPF4Q96M43 638 aa19.62■□□□□ 0.73
ABCF3-209ENST00000472608 AMPHP49418 695 aa19.61■□□□□ 0.73
ABCF3-209ENST00000472608 RGPD2P0DJD1 1756 aa19.61■□□□□ 0.73
ABCF3-209ENST00000472608 RTL1A6NKG5 1358 aa19.6■□□□□ 0.73
ABCF3-209ENST00000472608 C4BP0C0L5 1744 aa19.6■□□□□ 0.73
ABCF3-209ENST00000472608 TOGARAM1Q9Y4F4 1720 aa19.6■□□□□ 0.73
ABCF3-209ENST00000472608 FYB1O15117 783 aa19.6■□□□□ 0.73
ABCF3-209ENST00000472608 FBLN1P23142 703 aa19.6■□□□□ 0.73
ABCF3-209ENST00000472608 COG3Q96JB2 828 aa19.6■□□□□ 0.73
ABCF3-209ENST00000472608 NSD3Q9BZ95 1437 aa19.59■□□□□ 0.73
ABCF3-209ENST00000472608 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.59■□□□□ 0.73
ABCF3-209ENST00000472608 SMARCC1Q92922 1105 aaPredicted RBP19.59■□□□□ 0.73
ABCF3-209ENST00000472608 AK7Q96M32 723 aa19.59■□□□□ 0.73
ABCF3-209ENST00000472608 PANK3Q9H999 370 aa19.59■□□□□ 0.73
ABCF3-209ENST00000472608 SSFA2P28290 1259 aa19.58■□□□□ 0.72
ABCF3-209ENST00000472608 RAPGEF4Q8WZA2 1011 aa19.58■□□□□ 0.72
ABCF3-209ENST00000472608 UBR3Q6ZT12 1888 aa19.58■□□□□ 0.72
ABCF3-209ENST00000472608 WASHC2AQ641Q2 1341 aa19.57■□□□□ 0.72
ABCF3-209ENST00000472608 PCDH11XQ9BZA7 1347 aa19.57■□□□□ 0.72
ABCF3-209ENST00000472608 PCDH11YQ9BZA8 1340 aa19.57■□□□□ 0.72
ABCF3-209ENST00000472608 WWC3Q9ULE0 1092 aa19.57■□□□□ 0.72
ABCF3-209ENST00000472608 TATP17735 454 aaPredicted RBP19.56■□□□□ 0.72
ABCF3-209ENST00000472608 MPRIPQ6WCQ1 1025 aa19.56■□□□□ 0.72
ABCF3-209ENST00000472608 JMYQ8N9B5 988 aa19.56■□□□□ 0.72
ABCF3-209ENST00000472608 CYP27B1O15528 508 aa19.55■□□□□ 0.72
ABCF3-209ENST00000472608 SMIM5Q71RC9 77 aa19.55■□□□□ 0.72
ABCF3-209ENST00000472608 USHBP1Q8N6Y0 703 aa19.55■□□□□ 0.72
ABCF3-209ENST00000472608 PHF14O94880 888 aa19.54■□□□□ 0.72
ABCF3-209ENST00000472608 PXDNLA1KZ92 1463 aa19.54■□□□□ 0.72
ABCF3-209ENST00000472608 TGFB2P61812 414 aa19.53■□□□□ 0.72
ABCF3-209ENST00000472608 COL13A1Q5TAT6 717 aaPredicted RBP19.53■□□□□ 0.72
ABCF3-209ENST00000472608 RBM46Q8TBY0 533 aaKnown RBP19.53■□□□□ 0.72
ABCF3-209ENST00000472608 PIGBQ92521 554 aa19.53■□□□□ 0.72
ABCF3-209ENST00000472608 KLRG1Q96E93 195 aa19.53■□□□□ 0.72
ABCF3-209ENST00000472608 GGNBP2Q9H3C7 697 aa19.53■□□□□ 0.72
ABCF3-209ENST00000472608 NMRK2Q9NPI5 230 aa19.52■□□□□ 0.72
ABCF3-209ENST00000472608 MAP2P11137 1827 aaKnown RBP19.52■□□□□ 0.72
ABCF3-209ENST00000472608 KIF13BQ9NQT8 1826 aa19.52■□□□□ 0.72
ABCF3-209ENST00000472608 PCNTO95613 3336 aa19.51■□□□□ 0.71
ABCF3-209ENST00000472608 RRS1Q15050 365 aaKnown RBP19.51■□□□□ 0.71
ABCF3-209ENST00000472608 NKX1-1Q15270 411 aaPredicted RBP19.51■□□□□ 0.71
ABCF3-209ENST00000472608 LINC00116Q8NCU8 138 aa19.51■□□□□ 0.71
ABCF3-209ENST00000472608 KNSTRNQ9Y448 316 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms