RNA–Protein interactions for RNA: ENST00000472401.5

PDE9A-222, Transcript of phosphodiesterase 9A, human

TSL 3

Gene PDE9A, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE9A-222	ENST00000472401	KCNH5	Q8NCM2	988 aa		13.27	□□□□□ -0.29
PDE9A-222	ENST00000472401	SYTL4	Q96C24	671 aa	Predicted RBP	13.27	□□□□□ -0.29
PDE9A-222	ENST00000472401	CABP1	Q9NZU7	370 aa		13.27	□□□□□ -0.29
PDE9A-222	ENST00000472401	LY75	O60449	1722 aa		13.26	□□□□□ -0.29
PDE9A-222	ENST00000472401	ERBB3	P21860	1342 aa		13.26	□□□□□ -0.29
PDE9A-222	ENST00000472401	PRIM1	P49642	420 aa	Known RBP	13.26	□□□□□ -0.29
PDE9A-222	ENST00000472401	DDX54	Q8TDD1	881 aa	Known RBP	13.26	□□□□□ -0.29
PDE9A-222	ENST00000472401	FSTL1	Q12841	308 aa		13.24	□□□□□ -0.29
PDE9A-222	ENST00000472401	PCDH10	Q9P2E7	1040 aa		13.24	□□□□□ -0.29
PDE9A-222	ENST00000472401	QRICH2	Q9H0J4	1663 aa		13.24	□□□□□ -0.29
PDE9A-222	ENST00000472401	ANKRD36B	Q8N2N9	1353 aa		13.23	□□□□□ -0.29
PDE9A-222	ENST00000472401	TTC21B	Q7Z4L5	1316 aa		13.23	□□□□□ -0.29
PDE9A-222	ENST00000472401	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.23	□□□□□ -0.29
PDE9A-222	ENST00000472401	DOT1L	Q8TEK3	1739 aa		13.22	□□□□□ -0.29
PDE9A-222	ENST00000472401	AMIGO3	Q86WK7	504 aa		13.21	□□□□□ -0.29
PDE9A-222	ENST00000472401	ANKRD24	Q8TF21	1146 aa		13.2	□□□□□ -0.3
PDE9A-222	ENST00000472401	SMIM5	Q71RC9	77 aa		13.19	□□□□□ -0.3
PDE9A-222	ENST00000472401	PXDNL	A1KZ92	1463 aa		13.18	□□□□□ -0.3
PDE9A-222	ENST00000472401	FLAD1	Q8NFF5	587 aa		13.18	□□□□□ -0.3
PDE9A-222	ENST00000472401	USP47	Q96K76	1375 aa		13.18	□□□□□ -0.3
PDE9A-222	ENST00000472401	KCP	Q6ZWJ8	1503 aa		13.18	□□□□□ -0.3
PDE9A-222	ENST00000472401	C5	P01031	1676 aa		13.18	□□□□□ -0.3
PDE9A-222	ENST00000472401	USP54	Q70EL1	1684 aa		13.18	□□□□□ -0.3
PDE9A-222	ENST00000472401	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.17	□□□□□ -0.3
PDE9A-222	ENST00000472401	ARHGAP27	Q6ZUM4	889 aa		13.17	□□□□□ -0.3
PDE9A-222	ENST00000472401	BCS1L	Q9Y276	419 aa		13.17	□□□□□ -0.3
PDE9A-222	ENST00000472401	TTC21A	Q8NDW8	1320 aa		13.16	□□□□□ -0.3
PDE9A-222	ENST00000472401	PHF14	O94880	888 aa		13.16	□□□□□ -0.3
PDE9A-222	ENST00000472401	FAM161A	Q3B820	660 aa		13.16	□□□□□ -0.3
PDE9A-222	ENST00000472401	C9orf131	Q5VYM1	1079 aa		13.16	□□□□□ -0.3
PDE9A-222	ENST00000472401	STAC3	Q96MF2	364 aa		13.16	□□□□□ -0.3
PDE9A-222	ENST00000472401	TOGARAM1	Q9Y4F4	1720 aa		13.16	□□□□□ -0.3
PDE9A-222	ENST00000472401	ZEB1	P37275	1124 aa	Predicted RBP	13.15	□□□□□ -0.3
PDE9A-222	ENST00000472401	NBPF1	Q3BBV0	1214 aa		13.15	□□□□□ -0.3
PDE9A-222	ENST00000472401	C10orf71	Q711Q0	1435 aa		13.14	□□□□□ -0.31
PDE9A-222	ENST00000472401	KIAA1551	Q9HCM1	1747 aa		13.14	□□□□□ -0.31
PDE9A-222	ENST00000472401	SMC1B	Q8NDV3	1235 aa		13.14	□□□□□ -0.31
PDE9A-222	ENST00000472401	RRAGC	Q9HB90	399 aa		13.14	□□□□□ -0.31
PDE9A-222	ENST00000472401	PLEKHG2	Q9H7P9	1386 aa		13.14	□□□□□ -0.31
PDE9A-222	ENST00000472401	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.13	□□□□□ -0.31
PDE9A-222	ENST00000472401		A0A0G2JLW4	131 aa		13.13	□□□□□ -0.31
PDE9A-222	ENST00000472401	AK7	Q96M32	723 aa		13.13	□□□□□ -0.31
PDE9A-222	ENST00000472401	PALLD	Q8WX93	1383 aa		13.12	□□□□□ -0.31
PDE9A-222	ENST00000472401	ZNF692	Q9BU19	519 aa	Predicted RBP	13.12	□□□□□ -0.31
PDE9A-222	ENST00000472401	KDM2B	Q8NHM5	1336 aa		13.12	□□□□□ -0.31
PDE9A-222	ENST00000472401	TAF1L	Q8IZX4	1826 aa		13.11	□□□□□ -0.31
PDE9A-222	ENST00000472401	C4B	P0C0L5	1744 aa		13.11	□□□□□ -0.31
PDE9A-222	ENST00000472401	LTV1	Q96GA3	475 aa	Predicted RBP	13.11	□□□□□ -0.31
PDE9A-222	ENST00000472401	MEGF6	O75095	1541 aa		13.11	□□□□□ -0.31
PDE9A-222	ENST00000472401	LTN1	O94822	1766 aa		13.11	□□□□□ -0.31
PDE9A-222	ENST00000472401	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.11	□□□□□ -0.31
PDE9A-222	ENST00000472401	PKD1L3	Q7Z443	1732 aa		13.1	□□□□□ -0.31
PDE9A-222	ENST00000472401	USP31	Q70CQ4	1352 aa		13.1	□□□□□ -0.31
PDE9A-222	ENST00000472401	KTN1	Q86UP2	1357 aa	Known RBP	13.1	□□□□□ -0.31
PDE9A-222	ENST00000472401	FOXN1	O15353	648 aa		13.1	□□□□□ -0.31
PDE9A-222	ENST00000472401	FCHSD2	O94868	740 aa		13.1	□□□□□ -0.31
PDE9A-222	ENST00000472401	MMP10	P09238	476 aa		13.1	□□□□□ -0.31
PDE9A-222	ENST00000472401	NME9	Q86XW9	330 aa		13.1	□□□□□ -0.31
PDE9A-222	ENST00000472401	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.1	□□□□□ -0.31
PDE9A-222	ENST00000472401	ZCRB1	Q8TBF4	217 aa	Known RBP	13.1	□□□□□ -0.31
PDE9A-222	ENST00000472401	UBR3	Q6ZT12	1888 aa		13.09	□□□□□ -0.31
PDE9A-222	ENST00000472401	RNF181	Q9P0P0	153 aa		13.09	□□□□□ -0.31
PDE9A-222	ENST00000472401	KIAA1210	Q9ULL0	1709 aa		13.09	□□□□□ -0.31
PDE9A-222	ENST00000472401	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.08	□□□□□ -0.31
PDE9A-222	ENST00000472401	DPEP1	P16444	411 aa		13.08	□□□□□ -0.32
PDE9A-222	ENST00000472401	TGFB2	P61812	414 aa		13.08	□□□□□ -0.32
PDE9A-222	ENST00000472401	KIF13B	Q9NQT8	1826 aa		13.08	□□□□□ -0.32
PDE9A-222	ENST00000472401	FAM208A	Q9UK61	1670 aa	Known RBP	13.08	□□□□□ -0.32
PDE9A-222	ENST00000472401	NSD3	Q9BZ95	1437 aa		13.07	□□□□□ -0.32
PDE9A-222	ENST00000472401	SSFA2	P28290	1259 aa		13.07	□□□□□ -0.32
PDE9A-222	ENST00000472401	EVC2	Q86UK5	1308 aa		13.07	□□□□□ -0.32
PDE9A-222	ENST00000472401	PRDM10	Q9NQV6	1147 aa		13.06	□□□□□ -0.32
PDE9A-222	ENST00000472401	LINC00116	Q8NCU8	138 aa		13.05	□□□□□ -0.32
PDE9A-222	ENST00000472401	IP6K1	Q92551	441 aa		13.05	□□□□□ -0.32
PDE9A-222	ENST00000472401	MKRN1	Q9UHC7	482 aa	Known RBP	13.05	□□□□□ -0.32
PDE9A-222	ENST00000472401	KCNA3	P22001	575 aa		13.04	□□□□□ -0.32
PDE9A-222	ENST00000472401	MPRIP	Q6WCQ1	1025 aa		13.04	□□□□□ -0.32
PDE9A-222	ENST00000472401	ABHD8	Q96I13	439 aa		13.04	□□□□□ -0.32
PDE9A-222	ENST00000472401	MON2	Q7Z3U7	1717 aa		13.04	□□□□□ -0.32
PDE9A-222	ENST00000472401	SBNO2	Q9Y2G9	1366 aa		13.04	□□□□□ -0.32
PDE9A-222	ENST00000472401	BRCA1	P38398	1863 aa	Known RBP	13.04	□□□□□ -0.32
PDE9A-222	ENST00000472401	DCAF5	Q96JK2	942 aa		13.03	□□□□□ -0.32
PDE9A-222	ENST00000472401	GNPAT	O15228	680 aa		13.02	□□□□□ -0.33
PDE9A-222	ENST00000472401	HMGB2	P26583	209 aa	Known RBP	13.02	□□□□□ -0.33
PDE9A-222	ENST00000472401	CTCF	P49711	727 aa	Predicted RBP	13.01	□□□□□ -0.33
PDE9A-222	ENST00000472401	MLLT1	Q03111	559 aa	Predicted RBP	13.01	□□□□□ -0.33
PDE9A-222	ENST00000472401	USHBP1	Q8N6Y0	703 aa		13.01	□□□□□ -0.33
PDE9A-222	ENST00000472401	ARFGEF1	Q9Y6D6	1849 aa		13.01	□□□□□ -0.33
PDE9A-222	ENST00000472401	RGPD2	P0DJD1	1756 aa		13	□□□□□ -0.33
PDE9A-222	ENST00000472401	CD163L1	Q9NR16	1453 aa		13	□□□□□ -0.33
PDE9A-222	ENST00000472401	RAB3GAP2	Q9H2M9	1393 aa		13	□□□□□ -0.33
PDE9A-222	ENST00000472401	VEGFA	P15692	232 aa	Predicted RBP	13	□□□□□ -0.33
PDE9A-222	ENST00000472401	SMARCC1	Q92922	1105 aa	Predicted RBP	13	□□□□□ -0.33
PDE9A-222	ENST00000472401	CCDC87	Q9NVE4	849 aa		13	□□□□□ -0.33
PDE9A-222	ENST00000472401	RASSF7	Q02833	373 aa		12.99	□□□□□ -0.33
PDE9A-222	ENST00000472401	ITPK1	Q13572	414 aa		12.99	□□□□□ -0.33
PDE9A-222	ENST00000472401	MAP3K19	Q56UN5	1328 aa		12.98	□□□□□ -0.33
PDE9A-222	ENST00000472401	LOC102724428	A0A0B4J2F2	783 aa		12.98	□□□□□ -0.33
PDE9A-222	ENST00000472401	HOXC9	P31274	260 aa		12.98	□□□□□ -0.33
PDE9A-222	ENST00000472401	LBX1	P52954	281 aa		12.98	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms