RNA–Protein interactions for RNA: ENST00000472378.1

TSPO-205, Transcript of translocator protein, humanhuman

TSL 2

Gene TSPO, Length 495 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-205ENST00000472378 KAT6BQ8WYB5 2073 aa22.62■■□□□ 1.21
TSPO-205ENST00000472378 MEGF6O75095 1541 aa22.62■■□□□ 1.21
TSPO-205ENST00000472378 IGSF1Q8N6C5 1336 aa22.62■■□□□ 1.21
TSPO-205ENST00000472378 PCDH11XQ9BZA7 1347 aa22.62■■□□□ 1.21
TSPO-205ENST00000472378 PCDH11YQ9BZA8 1340 aa22.62■■□□□ 1.21
TSPO-205ENST00000472378 CFAP53Q96M91 514 aa22.62■■□□□ 1.21
TSPO-205ENST00000472378 DEFB132Q7Z7B7 95 aa22.61■■□□□ 1.21
TSPO-205ENST00000472378 SBF2Q86WG5 1849 aa22.61■■□□□ 1.21
TSPO-205ENST00000472378 TNS1Q9HBL0 1735 aaKnown RBP22.6■■□□□ 1.21
TSPO-205ENST00000472378 DIAPH1O60610 1272 aaKnown RBP22.59■■□□□ 1.21
TSPO-205ENST00000472378 IL13P35225 146 aa22.58■■□□□ 1.21
TSPO-205ENST00000472378 DDX10Q13206 875 aaKnown RBP22.58■■□□□ 1.21
TSPO-205ENST00000472378 PLSCR1O15162 318 aa22.57■■□□□ 1.2
TSPO-205ENST00000472378 EN1Q05925 392 aaPredicted RBP22.57■■□□□ 1.2
TSPO-205ENST00000472378 AMOTQ4VCS5 1084 aa22.56■■□□□ 1.2
TSPO-205ENST00000472378 PLEKHO1Q53GL0 409 aaPredicted RBP22.55■■□□□ 1.2
TSPO-205ENST00000472378 RALBP1Q15311 655 aa22.54■■□□□ 1.2
TSPO-205ENST00000472378 CAMKK2Q96RR4 588 aa22.54■■□□□ 1.2
TSPO-205ENST00000472378 NUDCQ9Y266 331 aa22.54■■□□□ 1.2
TSPO-205ENST00000472378 PPP2R1AP30153 589 aa22.53■■□□□ 1.2
TSPO-205ENST00000472378 SULT6B1Q6IMI4 303 aa22.53■■□□□ 1.2
TSPO-205ENST00000472378 PKD1L3Q7Z443 1732 aa22.53■■□□□ 1.2
TSPO-205ENST00000472378 NHSQ6T4R5 1651 aa22.52■■□□□ 1.2
TSPO-205ENST00000472378 IFNL2Q8IZJ0 200 aa22.52■■□□□ 1.2
TSPO-205ENST00000472378 ACSBG1Q96GR2 724 aa22.52■■□□□ 1.2
TSPO-205ENST00000472378 RGPD3A6NKT7 1758 aaPredicted RBP22.52■■□□□ 1.2
TSPO-205ENST00000472378 RGPD4Q7Z3J3 1758 aa22.52■■□□□ 1.2
TSPO-205ENST00000472378 KDRP35968 1356 aa22.51■■□□□ 1.19
TSPO-205ENST00000472378 HSP90AB1P08238 724 aaKnown RBP22.51■■□□□ 1.19
TSPO-205ENST00000472378 SHANK3Q9BYB0 1731 aa22.51■■□□□ 1.19
TSPO-205ENST00000472378 HMGB2P26583 209 aaKnown RBP22.5■■□□□ 1.19
TSPO-205ENST00000472378 EZH2Q15910 746 aaKnown RBP22.5■■□□□ 1.19
TSPO-205ENST00000472378 SYTL4Q96C24 671 aaPredicted RBP22.5■■□□□ 1.19
TSPO-205ENST00000472378 ZNF316A6NFI3 1004 aaPredicted RBP22.49■■□□□ 1.19
TSPO-205ENST00000472378 CYP27B1O15528 508 aa22.49■■□□□ 1.19
TSPO-205ENST00000472378 KCNQ2O43526 872 aa22.49■■□□□ 1.19
TSPO-205ENST00000472378 NKX1-1Q15270 411 aaPredicted RBP22.49■■□□□ 1.19
TSPO-205ENST00000472378 NBPF14Q5TI25 921 aa22.49■■□□□ 1.19
TSPO-205ENST00000472378 PRIM1P49642 420 aaKnown RBP22.48■■□□□ 1.19
TSPO-205ENST00000472378 U2SURPO15042 1029 aaKnown RBP22.47■■□□□ 1.19
TSPO-205ENST00000472378 C1orf141Q5JVX7 400 aa22.47■■□□□ 1.19
TSPO-205ENST00000472378 AEBP1Q8IUX7 1158 aa22.46■■□□□ 1.19
TSPO-205ENST00000472378 PHKG2P15735 406 aa22.45■■□□□ 1.18
TSPO-205ENST00000472378 ZNF530Q6P9A1 599 aaPredicted RBP22.45■■□□□ 1.18
TSPO-205ENST00000472378 COL3A1P02461 1466 aaPredicted RBP22.45■■□□□ 1.18
TSPO-205ENST00000472378 DOT1LQ8TEK3 1739 aa22.45■■□□□ 1.18
TSPO-205ENST00000472378 BTAF1O14981 1849 aa22.44■■□□□ 1.18
TSPO-205ENST00000472378 PTF1AQ7RTS3 328 aa22.44■■□□□ 1.18
TSPO-205ENST00000472378 DCAF5Q96JK2 942 aa22.44■■□□□ 1.18
TSPO-205ENST00000472378 HMOX1P09601 288 aa22.43■■□□□ 1.18
TSPO-205ENST00000472378 TXNRD1Q16881 649 aa22.42■■□□□ 1.18
TSPO-205ENST00000472378 RREB1Q92766 1687 aa22.42■■□□□ 1.18
TSPO-205ENST00000472378 SLC27A3Q5K4L6 730 aa22.41■■□□□ 1.18
TSPO-205ENST00000472378 SMARCC1Q92922 1105 aaPredicted RBP22.41■■□□□ 1.18
TSPO-205ENST00000472378 TMOD3Q9NYL9 352 aa22.4■■□□□ 1.18
TSPO-205ENST00000472378 MYBBP1AQ9BQG0 1328 aaKnown RBP22.39■■□□□ 1.18
TSPO-205ENST00000472378 ERVV-2B6SEH9 535 aa22.39■■□□□ 1.17
TSPO-205ENST00000472378 NEFMP07197 916 aa22.39■■□□□ 1.17
TSPO-205ENST00000472378 U2AF1L5P0DN76 240 aaPredicted RBP22.39■■□□□ 1.17
TSPO-205ENST00000472378 U2AF1Q01081 240 aaKnown RBP eCLIP22.39■■□□□ 1.17
TSPO-205ENST00000472378 MPRIPQ6WCQ1 1025 aa22.39■■□□□ 1.17
TSPO-205ENST00000472378 FCHSD2O94868 740 aa22.38■■□□□ 1.17
TSPO-205ENST00000472378 AKAP4Q5JQC9 854 aa22.38■■□□□ 1.17
TSPO-205ENST00000472378 PNNQ9H307 717 aaKnown RBP22.38■■□□□ 1.17
TSPO-205ENST00000472378 GAS2L2Q8NHY3 880 aa22.37■■□□□ 1.17
TSPO-205ENST00000472378 NUP188Q5SRE5 1749 aa22.37■■□□□ 1.17
TSPO-205ENST00000472378 PROM2Q8N271 834 aa22.35■■□□□ 1.17
TSPO-205ENST00000472378 STK32BQ9NY57 414 aa22.35■■□□□ 1.17
TSPO-205ENST00000472378 ITGB4P16144 1822 aa22.35■■□□□ 1.17
TSPO-205ENST00000472378 CABP4P57796 275 aa22.33■■□□□ 1.17
TSPO-205ENST00000472378 R3HDM1Q15032 1099 aaKnown RBP22.33■■□□□ 1.17
TSPO-205ENST00000472378 PIGBQ92521 554 aa22.33■■□□□ 1.17
TSPO-205ENST00000472378 PRKRIP1Q9H875 184 aaPredicted RBP22.33■■□□□ 1.17
TSPO-205ENST00000472378 PRKAR2BP31323 418 aa22.32■■□□□ 1.16
TSPO-205ENST00000472378 RSPH6AQ9H0K4 717 aa22.32■■□□□ 1.16
TSPO-205ENST00000472378 TOGARAM1Q9Y4F4 1720 aa22.31■■□□□ 1.16
TSPO-205ENST00000472378 MTHFSDQ2M296 383 aaKnown RBP22.31■■□□□ 1.16
TSPO-205ENST00000472378 CCNL1Q9UK58 526 aaPredicted RBP22.31■■□□□ 1.16
TSPO-205ENST00000472378 PALLDQ8WX93 1383 aa22.3■■□□□ 1.16
TSPO-205ENST00000472378 PSDA5PKW4 1024 aaPredicted RBP22.3■■□□□ 1.16
TSPO-205ENST00000472378 LY75O60449 1722 aa22.29■■□□□ 1.16
TSPO-205ENST00000472378 GNAT3A8MTJ3 354 aa22.29■■□□□ 1.16
TSPO-205ENST00000472378 KDM6AO15550 1401 aaPredicted RBP22.28■■□□□ 1.16
TSPO-205ENST00000472378 SLC15A2Q16348 729 aa22.27■■□□□ 1.16
TSPO-205ENST00000472378 SCN11AQ9UI33 1791 aa22.27■■□□□ 1.16
TSPO-205ENST00000472378 MAP3K5Q99683 1374 aa22.26■■□□□ 1.15
TSPO-205ENST00000472378 RNMTO43148 476 aaKnown RBP22.26■■□□□ 1.15
TSPO-205ENST00000472378 ANP32CO43423 234 aa22.25■■□□□ 1.15
TSPO-205ENST00000472378 NFATC2IPQ8NCF5 419 aa22.25■■□□□ 1.15
TSPO-205ENST00000472378 SLC52A2Q9HAB3 445 aa22.25■■□□□ 1.15
TSPO-205ENST00000472378 LRRC4BQ9NT99 713 aa22.25■■□□□ 1.15
TSPO-205ENST00000472378 WDR43Q15061 677 aaKnown RBP eCLIP22.24■■□□□ 1.15
TSPO-205ENST00000472378 RTF1Q92541 710 aaKnown RBP22.24■■□□□ 1.15
TSPO-205ENST00000472378 ASAP1Q9ULH1 1129 aa22.24■■□□□ 1.15
TSPO-205ENST00000472378 MAPK8IP3Q9UPT6 1336 aa22.24■■□□□ 1.15
TSPO-205ENST00000472378 LOC102724428A0A0B4J2F2 783 aa22.23■■□□□ 1.15
TSPO-205ENST00000472378 SIK1P57059 783 aa22.23■■□□□ 1.15
TSPO-205ENST00000472378 TEFQ10587 303 aa22.23■■□□□ 1.15
TSPO-205ENST00000472378 PHACTR3Q96KR7 559 aa22.23■■□□□ 1.15
TSPO-205ENST00000472378 ANO8Q9HCE9 1232 aaPredicted RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 150.9 ms