RNA–Protein interactions for RNA: ENST00000471772.6

RPS27A-207, Transcript of ribosomal protein S27a, humanhuman

TSL 2

Gene RPS27A, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27A-207ENST00000471772 NUDCQ9Y266 331 aa10.72□□□□□ -0.69
RPS27A-207ENST00000471772 OVOS2A0A0G2JMS6 1433 aa10.72□□□□□ -0.69
RPS27A-207ENST00000471772 EP400Q96L91 3159 aa10.71□□□□□ -0.69
RPS27A-207ENST00000471772 DDX54Q8TDD1 881 aaKnown RBP10.71□□□□□ -0.69
RPS27A-207ENST00000471772 TNS2Q63HR2 1409 aa10.7□□□□□ -0.7
RPS27A-207ENST00000471772 KDRP35968 1356 aa10.7□□□□□ -0.7
RPS27A-207ENST00000471772 AMOTQ4VCS5 1084 aa10.7□□□□□ -0.7
RPS27A-207ENST00000471772 PLEKHO1Q53GL0 409 aaPredicted RBP10.7□□□□□ -0.7
RPS27A-207ENST00000471772 SULT6B1Q6IMI4 303 aa10.7□□□□□ -0.7
RPS27A-207ENST00000471772 BCL11BQ9C0K0 894 aaPredicted RBP10.7□□□□□ -0.7
RPS27A-207ENST00000471772 PRKRIP1Q9H875 184 aaPredicted RBP10.7□□□□□ -0.7
RPS27A-207ENST00000471772 LRRC37A3O60309 1634 aa10.69□□□□□ -0.7
RPS27A-207ENST00000471772 MEGF6O75095 1541 aa10.69□□□□□ -0.7
RPS27A-207ENST00000471772 TRIM37O94972 964 aa10.69□□□□□ -0.7
RPS27A-207ENST00000471772 SBF2Q86WG5 1849 aa10.69□□□□□ -0.7
RPS27A-207ENST00000471772 MYBBP1AQ9BQG0 1328 aaKnown RBP10.68□□□□□ -0.7
RPS27A-207ENST00000471772 PCDH11XQ9BZA7 1347 aa10.68□□□□□ -0.7
RPS27A-207ENST00000471772 PCDH11YQ9BZA8 1340 aa10.68□□□□□ -0.7
RPS27A-207ENST00000471772 CYP27B1O15528 508 aa10.68□□□□□ -0.7
RPS27A-207ENST00000471772 FCHSD2O94868 740 aa10.68□□□□□ -0.7
RPS27A-207ENST00000471772 NKX1-1Q15270 411 aaPredicted RBP10.68□□□□□ -0.7
RPS27A-207ENST00000471772 AEBP1Q8IUX7 1158 aa10.68□□□□□ -0.7
RPS27A-207ENST00000471772 IFNL2Q8IZJ0 200 aa10.68□□□□□ -0.7
RPS27A-207ENST00000471772 RGPD1P0DJD0 1748 aa10.67□□□□□ -0.7
RPS27A-207ENST00000471772 U2SURPO15042 1029 aaKnown RBP10.67□□□□□ -0.7
RPS27A-207ENST00000471772 PLSCR1O15162 318 aa10.67□□□□□ -0.7
RPS27A-207ENST00000471772 APBA3O96018 575 aa10.67□□□□□ -0.7
RPS27A-207ENST00000471772 BAG6P46379 1132 aa10.67□□□□□ -0.7
RPS27A-207ENST00000471772 COL3A1P02461 1466 aaPredicted RBP10.67□□□□□ -0.7
RPS27A-207ENST00000471772 HSP90AB1P08238 724 aaKnown RBP10.66□□□□□ -0.7
RPS27A-207ENST00000471772 HMOX1P09601 288 aa10.66□□□□□ -0.7
RPS27A-207ENST00000471772 KCNQ2O43526 872 aa10.65□□□□□ -0.7
RPS27A-207ENST00000471772 U2AF1L5P0DN76 240 aaPredicted RBP10.65□□□□□ -0.7
RPS27A-207ENST00000471772 PHKG2P15735 406 aa10.65□□□□□ -0.7
RPS27A-207ENST00000471772 U2AF1Q01081 240 aaKnown RBP eCLIP10.65□□□□□ -0.7
RPS27A-207ENST00000471772 CAMKK2Q96RR4 588 aa10.65□□□□□ -0.7
RPS27A-207ENST00000471772 PNNQ9H307 717 aaKnown RBP10.65□□□□□ -0.7
RPS27A-207ENST00000471772 PKD1L3Q7Z443 1732 aa10.64□□□□□ -0.71
RPS27A-207ENST00000471772 ANP32CO43423 234 aa10.64□□□□□ -0.71
RPS27A-207ENST00000471772 PRIM1P49642 420 aaKnown RBP10.64□□□□□ -0.71
RPS27A-207ENST00000471772 C1orf141Q5JVX7 400 aa10.64□□□□□ -0.71
RPS27A-207ENST00000471772 DEFB132Q7Z7B7 95 aa10.64□□□□□ -0.71
RPS27A-207ENST00000471772 ACSBG1Q96GR2 724 aa10.64□□□□□ -0.71
RPS27A-207ENST00000471772 DCAF5Q96JK2 942 aa10.64□□□□□ -0.71
RPS27A-207ENST00000471772 SHANK3Q9BYB0 1731 aa10.64□□□□□ -0.71
RPS27A-207ENST00000471772 ERVV-2B6SEH9 535 aa10.63□□□□□ -0.71
RPS27A-207ENST00000471772 EN1Q05925 392 aaPredicted RBP10.63□□□□□ -0.71
RPS27A-207ENST00000471772 AKAP4Q5JQC9 854 aa10.63□□□□□ -0.71
RPS27A-207ENST00000471772 ZNF530Q6P9A1 599 aaPredicted RBP10.63□□□□□ -0.71
RPS27A-207ENST00000471772 PTF1AQ7RTS3 328 aa10.63□□□□□ -0.71
RPS27A-207ENST00000471772 RSPH6AQ9H0K4 717 aa10.63□□□□□ -0.71
RPS27A-207ENST00000471772 GAS2L2Q8NHY3 880 aa10.62□□□□□ -0.71
RPS27A-207ENST00000471772 NEFMP07197 916 aa10.61□□□□□ -0.71
RPS27A-207ENST00000471772 HMGB2P26583 209 aaKnown RBP10.61□□□□□ -0.71
RPS27A-207ENST00000471772 PRKAR2BP31323 418 aa10.61□□□□□ -0.71
RPS27A-207ENST00000471772 MTHFSDQ2M296 383 aaKnown RBP10.61□□□□□ -0.71
RPS27A-207ENST00000471772 SYTL4Q96C24 671 aaPredicted RBP10.61□□□□□ -0.71
RPS27A-207ENST00000471772 PHACTR3Q96KR7 559 aa10.61□□□□□ -0.71
RPS27A-207ENST00000471772 EZH2Q15910 746 aaKnown RBP10.6□□□□□ -0.71
RPS27A-207ENST00000471772 MPRIPQ6WCQ1 1025 aa10.6□□□□□ -0.71
RPS27A-207ENST00000471772 PROM2Q8N271 834 aa10.6□□□□□ -0.71
RPS27A-207ENST00000471772 TNS1Q9HBL0 1735 aaKnown RBP10.6□□□□□ -0.71
RPS27A-207ENST00000471772 ITGB4P16144 1822 aa10.6□□□□□ -0.71
RPS27A-207ENST00000471772 NHSQ6T4R5 1651 aa10.6□□□□□ -0.71
RPS27A-207ENST00000471772 GNAT3A8MTJ3 354 aa10.59□□□□□ -0.71
RPS27A-207ENST00000471772 HTATSF1O43719 755 aaKnown RBP10.59□□□□□ -0.71
RPS27A-207ENST00000471772 PIGBQ92521 554 aa10.59□□□□□ -0.71
RPS27A-207ENST00000471772 SMARCC1Q92922 1105 aaPredicted RBP10.59□□□□□ -0.71
RPS27A-207ENST00000471772 PLEKHF1Q96S99 279 aa10.59□□□□□ -0.71
RPS27A-207ENST00000471772 TMOD3Q9NYL9 352 aa10.59□□□□□ -0.71
RPS27A-207ENST00000471772 BTAF1O14981 1849 aa10.58□□□□□ -0.72
RPS27A-207ENST00000471772 RNMTO43148 476 aaKnown RBP10.58□□□□□ -0.72
RPS27A-207ENST00000471772 CABP4P57796 275 aa10.58□□□□□ -0.72
RPS27A-207ENST00000471772 WDR43Q15061 677 aaKnown RBP eCLIP10.58□□□□□ -0.72
RPS27A-207ENST00000471772 TXNRD1Q16881 649 aa10.58□□□□□ -0.72
RPS27A-207ENST00000471772 SLC27A3Q5K4L6 730 aa10.58□□□□□ -0.72
RPS27A-207ENST00000471772 RGPD3A6NKT7 1758 aaPredicted RBP10.57□□□□□ -0.72
RPS27A-207ENST00000471772 RGPD4Q7Z3J3 1758 aa10.57□□□□□ -0.72
RPS27A-207ENST00000471772 NBPF14Q5TI25 921 aa10.57□□□□□ -0.72
RPS27A-207ENST00000471772 NFATC2IPQ8NCF5 419 aa10.57□□□□□ -0.72
RPS27A-207ENST00000471772 LGR6Q9HBX8 967 aa10.57□□□□□ -0.72
RPS27A-207ENST00000471772 ADAMTS8Q9UP79 889 aa10.57□□□□□ -0.72
RPS27A-207ENST00000471772 DOT1LQ8TEK3 1739 aa10.56□□□□□ -0.72
RPS27A-207ENST00000471772 IL17REQ8NFR9 667 aa10.56□□□□□ -0.72
RPS27A-207ENST00000471772 SLC52A2Q9HAB3 445 aa10.56□□□□□ -0.72
RPS27A-207ENST00000471772 SCN11AQ9UI33 1791 aa10.56□□□□□ -0.72
RPS27A-207ENST00000471772 MAP3K5Q99683 1374 aa10.55□□□□□ -0.72
RPS27A-207ENST00000471772 NFE2L2Q16236 605 aa10.55□□□□□ -0.72
RPS27A-207ENST00000471772 PNISRQ8TF01 805 aaKnown RBP10.55□□□□□ -0.72
RPS27A-207ENST00000471772 RTF1Q92541 710 aaKnown RBP10.55□□□□□ -0.72
RPS27A-207ENST00000471772 RUNDC1Q96C34 613 aa10.55□□□□□ -0.72
RPS27A-207ENST00000471772 ATG3Q9NT62 314 aa10.55□□□□□ -0.72
RPS27A-207ENST00000471772 ASAP1Q9ULH1 1129 aa10.55□□□□□ -0.72
RPS27A-207ENST00000471772 VIRMAQ69YN4 1812 aaKnown RBP10.55□□□□□ -0.72
RPS27A-207ENST00000471772 KDM6AO15550 1401 aaPredicted RBP10.55□□□□□ -0.72
RPS27A-207ENST00000471772 MAPK8IP3Q9UPT6 1336 aa10.55□□□□□ -0.72
RPS27A-207ENST00000471772 CCDC184Q52MB2 194 aa10.54□□□□□ -0.72
RPS27A-207ENST00000471772 MRS2Q9HD23 443 aa10.54□□□□□ -0.72
RPS27A-207ENST00000471772 TOGARAM1Q9Y4F4 1720 aa10.53□□□□□ -0.72
RPS27A-207ENST00000471772 TEFQ10587 303 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms