RNA–Protein interactions for RNA: ENST00000471126.1

CNOT3-206, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 3

Gene CNOT3, Length 541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-206ENST00000471126 USP54Q70EL1 1684 aa21.4■■□□□ 1.02
CNOT3-206ENST00000471126 MSL1Q68DK7 614 aa21.38■■□□□ 1.01
CNOT3-206ENST00000471126 CD2APQ9Y5K6 639 aa21.38■■□□□ 1.01
CNOT3-206ENST00000471126 HSPA5P11021 654 aaKnown RBP21.37■■□□□ 1.01
CNOT3-206ENST00000471126 SLC12A5Q9H2X9 1139 aa21.37■■□□□ 1.01
CNOT3-206ENST00000471126 A0A1W2PP64 1363 aa21.36■■□□□ 1.01
CNOT3-206ENST00000471126 TOMM70O94826 608 aa21.36■■□□□ 1.01
CNOT3-206ENST00000471126 CDCA8Q53HL2 280 aa21.36■■□□□ 1.01
CNOT3-206ENST00000471126 COL23A1Q86Y22 540 aaPredicted RBP21.36■■□□□ 1.01
CNOT3-206ENST00000471126 KCNH5Q8NCM2 988 aa21.36■■□□□ 1.01
CNOT3-206ENST00000471126 WWC3Q9ULE0 1092 aa21.35■■□□□ 1.01
CNOT3-206ENST00000471126 KTN1Q86UP2 1357 aaKnown RBP21.35■■□□□ 1.01
CNOT3-206ENST00000471126 TTC21BQ7Z4L5 1316 aa21.34■■□□□ 1.01
CNOT3-206ENST00000471126 TTC21AQ8NDW8 1320 aa21.34■■□□□ 1.01
CNOT3-206ENST00000471126 IL2RBP14784 551 aa21.34■■□□□ 1.01
CNOT3-206ENST00000471126 EDC4Q6P2E9 1401 aaKnown RBP21.34■■□□□ 1.01
CNOT3-206ENST00000471126 BTAF1O14981 1849 aa21.34■■□□□ 1.01
CNOT3-206ENST00000471126 KLRG1Q96E93 195 aa21.33■■□□□ 1.01
CNOT3-206ENST00000471126 NLRP2Q9NX02 1062 aa21.33■■□□□ 1.01
CNOT3-206ENST00000471126 ANKRD36BQ8N2N9 1353 aa21.33■■□□□ 1
CNOT3-206ENST00000471126 HTRA3P83110 453 aa21.32■■□□□ 1
CNOT3-206ENST00000471126 JMYQ8N9B5 988 aa21.32■■□□□ 1
CNOT3-206ENST00000471126 TERF2IPQ9NYB0 399 aa21.32■■□□□ 1
CNOT3-206ENST00000471126 ABCC6O95255 1503 aa21.32■■□□□ 1
CNOT3-206ENST00000471126 QSER1Q2KHR3 1735 aa21.31■■□□□ 1
CNOT3-206ENST00000471126 USP31Q70CQ4 1352 aa21.31■■□□□ 1
CNOT3-206ENST00000471126 TMC1Q8TDI8 760 aa21.3■■□□□ 1
CNOT3-206ENST00000471126 HDGFL2Q7Z4V5 671 aaPredicted RBP21.29■■□□□ 1
CNOT3-206ENST00000471126 SYTL4Q96C24 671 aaPredicted RBP21.29■■□□□ 1
CNOT3-206ENST00000471126 SLC34A2O95436 690 aa21.28■■□□□ 1
CNOT3-206ENST00000471126 DDX54Q8TDD1 881 aaKnown RBP21.28■■□□□ 1
CNOT3-206ENST00000471126 CCNL1Q9UK58 526 aaPredicted RBP21.27■■□□□ 1
CNOT3-206ENST00000471126 IGSF1Q8N6C5 1336 aa21.27■□□□□ 0.99
CNOT3-206ENST00000471126 NFAT5O94916 1531 aa21.26■□□□□ 0.99
CNOT3-206ENST00000471126 PRIM1P49642 420 aaKnown RBP21.26■□□□□ 0.99
CNOT3-206ENST00000471126 RGPD5Q99666 1765 aa21.25■□□□□ 0.99
CNOT3-206ENST00000471126 ERBB3P21860 1342 aa21.25■□□□□ 0.99
CNOT3-206ENST00000471126 TUBGCP6Q96RT7 1819 aa21.24■□□□□ 0.99
CNOT3-206ENST00000471126 NMRK2Q9NPI5 230 aa21.23■□□□□ 0.99
CNOT3-206ENST00000471126 KAT6BQ8WYB5 2073 aa21.2■□□□□ 0.99
CNOT3-206ENST00000471126 NME9Q86XW9 330 aa21.2■□□□□ 0.98
CNOT3-206ENST00000471126 RBM46Q8TBY0 533 aaKnown RBP21.2■□□□□ 0.98
CNOT3-206ENST00000471126 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.19■□□□□ 0.98
CNOT3-206ENST00000471126 ANKRD24Q8TF21 1146 aa21.19■□□□□ 0.98
CNOT3-206ENST00000471126 CARD14Q9BXL6 1004 aa21.19■□□□□ 0.98
CNOT3-206ENST00000471126 KIF20BQ96Q89 1820 aa21.18■□□□□ 0.98
CNOT3-206ENST00000471126 KIF7Q2M1P5 1343 aa21.17■□□□□ 0.98
CNOT3-206ENST00000471126 NSD2O96028 1365 aa21.17■□□□□ 0.98
CNOT3-206ENST00000471126 WDR90Q96KV7 1748 aa21.16■□□□□ 0.98
CNOT3-206ENST00000471126 FLAD1Q8NFF5 587 aa21.16■□□□□ 0.98
CNOT3-206ENST00000471126 NSD3Q9BZ95 1437 aa21.15■□□□□ 0.98
CNOT3-206ENST00000471126 C16orf71Q8IYS4 520 aaPredicted RBP21.15■□□□□ 0.98
CNOT3-206ENST00000471126 FYB1O15117 783 aa21.14■□□□□ 0.97
CNOT3-206ENST00000471126 FSTL1Q12841 308 aa21.13■□□□□ 0.97
CNOT3-206ENST00000471126 LTN1O94822 1766 aa21.13■□□□□ 0.97
CNOT3-206ENST00000471126 HSPA1AP0DMV8 641 aaKnown RBP21.12■□□□□ 0.97
CNOT3-206ENST00000471126 HSPA1BP0DMV9 641 aaKnown RBP21.12■□□□□ 0.97
CNOT3-206ENST00000471126 ANKRD26Q9UPS8 1709 aa21.11■□□□□ 0.97
CNOT3-206ENST00000471126 WASHC2AQ641Q2 1341 aa21.09■□□□□ 0.97
CNOT3-206ENST00000471126 ARHGAP27Q6ZUM4 889 aa21.09■□□□□ 0.97
CNOT3-206ENST00000471126 LY75O60449 1722 aa21.09■□□□□ 0.97
CNOT3-206ENST00000471126 SMIM5Q71RC9 77 aa21.08■□□□□ 0.97
CNOT3-206ENST00000471126 COG3Q96JB2 828 aa21.08■□□□□ 0.97
CNOT3-206ENST00000471126 AMIGO3Q86WK7 504 aa21.07■□□□□ 0.96
CNOT3-206ENST00000471126 PANK3Q9H999 370 aa21.07■□□□□ 0.96
CNOT3-206ENST00000471126 BCS1LQ9Y276 419 aa21.07■□□□□ 0.96
CNOT3-206ENST00000471126 PCNTO95613 3336 aa21.07■□□□□ 0.96
CNOT3-206ENST00000471126 CGNL1Q0VF96 1302 aa21.06■□□□□ 0.96
CNOT3-206ENST00000471126 LTV1Q96GA3 475 aaPredicted RBP21.06■□□□□ 0.96
CNOT3-206ENST00000471126 CICQ96RK0 1608 aaPredicted RBP21.06■□□□□ 0.96
CNOT3-206ENST00000471126 PHF14O94880 888 aa21.05■□□□□ 0.96
CNOT3-206ENST00000471126 ZCRB1Q8TBF4 217 aaKnown RBP21.05■□□□□ 0.96
CNOT3-206ENST00000471126 GGNBP2Q9H3C7 697 aa21.05■□□□□ 0.96
CNOT3-206ENST00000471126 AK7Q96M32 723 aa21.04■□□□□ 0.96
CNOT3-206ENST00000471126 POLR3GLQ9BT43 218 aa21.04■□□□□ 0.96
CNOT3-206ENST00000471126 HMGB2P26583 209 aaKnown RBP21.03■□□□□ 0.96
CNOT3-206ENST00000471126 RTL1A6NKG5 1358 aa21.02■□□□□ 0.96
CNOT3-206ENST00000471126 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.02■□□□□ 0.96
CNOT3-206ENST00000471126 ZEB1P37275 1124 aaPredicted RBP21.02■□□□□ 0.96
CNOT3-206ENST00000471126 C9orf131Q5VYM1 1079 aa21.02■□□□□ 0.96
CNOT3-206ENST00000471126 RRAGCQ9HB90 399 aa21.02■□□□□ 0.96
CNOT3-206ENST00000471126 KIF24Q5T7B8 1368 aa21.01■□□□□ 0.95
CNOT3-206ENST00000471126 A0A0G2JLW4 131 aa21.01■□□□□ 0.95
CNOT3-206ENST00000471126 PER1O15534 1290 aaPredicted RBP21.01■□□□□ 0.95
CNOT3-206ENST00000471126 PCDH10Q9P2E7 1040 aa21.01■□□□□ 0.95
CNOT3-206ENST00000471126 MAP3K19Q56UN5 1328 aa21.01■□□□□ 0.95
CNOT3-206ENST00000471126 DOT1LQ8TEK3 1739 aa21.01■□□□□ 0.95
CNOT3-206ENST00000471126 FAM208AQ9UK61 1670 aaKnown RBP20.99■□□□□ 0.95
CNOT3-206ENST00000471126 SMC1BQ8NDV3 1235 aa20.99■□□□□ 0.95
CNOT3-206ENST00000471126 IP6K1Q92551 441 aa20.99■□□□□ 0.95
CNOT3-206ENST00000471126 PXDNLA1KZ92 1463 aa20.99■□□□□ 0.95
CNOT3-206ENST00000471126 PALLDQ8WX93 1383 aa20.98■□□□□ 0.95
CNOT3-206ENST00000471126 TGFB2P61812 414 aa20.98■□□□□ 0.95
CNOT3-206ENST00000471126 AMER1Q5JTC6 1135 aaPredicted RBP20.98■□□□□ 0.95
CNOT3-206ENST00000471126 KDM2BQ8NHM5 1336 aa20.98■□□□□ 0.95
CNOT3-206ENST00000471126 FCHSD2O94868 740 aa20.97■□□□□ 0.95
CNOT3-206ENST00000471126 NPC1L1Q9UHC9 1359 aa20.97■□□□□ 0.95
CNOT3-206ENST00000471126 KCPQ6ZWJ8 1503 aa20.96■□□□□ 0.95
CNOT3-206ENST00000471126 MMP10P09238 476 aa20.96■□□□□ 0.95
CNOT3-206ENST00000471126 FBLN1P23142 703 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms