RNA–Protein interactions for RNA: ENST00000470458.1

RFTN1-208, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-208ENST00000470458 PCDH11XQ9BZA7 1347 aa14.74□□□□□ -0.05
RFTN1-208ENST00000470458 PCDH11YQ9BZA8 1340 aa14.74□□□□□ -0.05
RFTN1-208ENST00000470458 TNNT2P45379 298 aaPredicted RBP14.74□□□□□ -0.05
RFTN1-208ENST00000470458 AMER1Q5JTC6 1135 aaPredicted RBP14.74□□□□□ -0.05
RFTN1-208ENST00000470458 PER1O15534 1290 aaPredicted RBP14.73□□□□□ -0.05
RFTN1-208ENST00000470458 EZH2Q15910 746 aaKnown RBP14.72□□□□□ -0.05
RFTN1-208ENST00000470458 RGPD2P0DJD1 1756 aa14.72□□□□□ -0.05
RFTN1-208ENST00000470458 HSP90AB1P08238 724 aaKnown RBP14.71□□□□□ -0.05
RFTN1-208ENST00000470458 AMOTQ4VCS5 1084 aa14.71□□□□□ -0.05
RFTN1-208ENST00000470458 EYA1Q99502 592 aa14.7□□□□□ -0.06
RFTN1-208ENST00000470458 NHSQ6T4R5 1651 aa14.7□□□□□ -0.06
RFTN1-208ENST00000470458 NCAPD2Q15021 1401 aa14.69□□□□□ -0.06
RFTN1-208ENST00000470458 EIF4A2Q14240 407 aaKnown RBP14.69□□□□□ -0.06
RFTN1-208ENST00000470458 SLC27A3Q5K4L6 730 aa14.69□□□□□ -0.06
RFTN1-208ENST00000470458 CFAP53Q96M91 514 aa14.69□□□□□ -0.06
RFTN1-208ENST00000470458 PLEKHO1Q53GL0 409 aaPredicted RBP14.68□□□□□ -0.06
RFTN1-208ENST00000470458 IFNL2Q8IZJ0 200 aa14.68□□□□□ -0.06
RFTN1-208ENST00000470458 CC2D1BQ5T0F9 858 aaKnown RBP14.67□□□□□ -0.06
RFTN1-208ENST00000470458 RREB1Q92766 1687 aa14.67□□□□□ -0.06
RFTN1-208ENST00000470458 IGSF1Q8N6C5 1336 aa14.66□□□□□ -0.06
RFTN1-208ENST00000470458 MEGF6O75095 1541 aa14.66□□□□□ -0.06
RFTN1-208ENST00000470458 MTHFSP49914 203 aa14.66□□□□□ -0.06
RFTN1-208ENST00000470458 NKX1-1Q15270 411 aaPredicted RBP14.66□□□□□ -0.06
RFTN1-208ENST00000470458 TXNRD1Q16881 649 aa14.66□□□□□ -0.06
RFTN1-208ENST00000470458 USHBP1Q8N6Y0 703 aa14.66□□□□□ -0.06
RFTN1-208ENST00000470458 SMARCC1Q92922 1105 aaPredicted RBP14.66□□□□□ -0.06
RFTN1-208ENST00000470458 SYTL4Q96C24 671 aaPredicted RBP14.66□□□□□ -0.06
RFTN1-208ENST00000470458 STK32BQ9NY57 414 aa14.66□□□□□ -0.06
RFTN1-208ENST00000470458 DIAPH1O60610 1272 aaKnown RBP14.65□□□□□ -0.06
RFTN1-208ENST00000470458 PRIM1P49642 420 aaKnown RBP14.65□□□□□ -0.06
RFTN1-208ENST00000470458 ACSBG1Q96GR2 724 aa14.65□□□□□ -0.06
RFTN1-208ENST00000470458 NUDCQ9Y266 331 aa14.65□□□□□ -0.06
RFTN1-208ENST00000470458 KCNQ2O43526 872 aa14.64□□□□□ -0.07
RFTN1-208ENST00000470458 BTAF1O14981 1849 aa14.64□□□□□ -0.07
RFTN1-208ENST00000470458 PKD1L3Q7Z443 1732 aa14.63□□□□□ -0.07
RFTN1-208ENST00000470458 R3HDM1Q15032 1099 aaKnown RBP14.63□□□□□ -0.07
RFTN1-208ENST00000470458 C1orf141Q5JVX7 400 aa14.63□□□□□ -0.07
RFTN1-208ENST00000470458 IL13P35225 146 aa14.62□□□□□ -0.07
RFTN1-208ENST00000470458 NUP188Q5SRE5 1749 aa14.62□□□□□ -0.07
RFTN1-208ENST00000470458 ERVV-2B6SEH9 535 aa14.61□□□□□ -0.07
RFTN1-208ENST00000470458 SULT6B1Q6IMI4 303 aa14.61□□□□□ -0.07
RFTN1-208ENST00000470458 DCAF5Q96JK2 942 aa14.61□□□□□ -0.07
RFTN1-208ENST00000470458 SHANK3Q9BYB0 1731 aa14.61□□□□□ -0.07
RFTN1-208ENST00000470458 KDRP35968 1356 aa14.6□□□□□ -0.07
RFTN1-208ENST00000470458 CYP27B1O15528 508 aa14.6□□□□□ -0.07
RFTN1-208ENST00000470458 TMOD3Q9NYL9 352 aa14.6□□□□□ -0.07
RFTN1-208ENST00000470458 DOT1LQ8TEK3 1739 aa14.59□□□□□ -0.07
RFTN1-208ENST00000470458 PSDA5PKW4 1024 aaPredicted RBP14.59□□□□□ -0.07
RFTN1-208ENST00000470458 PHKG2P15735 406 aa14.59□□□□□ -0.07
RFTN1-208ENST00000470458 SLC15A2Q16348 729 aa14.59□□□□□ -0.07
RFTN1-208ENST00000470458 PNNQ9H307 717 aaKnown RBP14.59□□□□□ -0.07
RFTN1-208ENST00000470458 NEFMP07197 916 aa14.58□□□□□ -0.08
RFTN1-208ENST00000470458 MPRIPQ6WCQ1 1025 aa14.58□□□□□ -0.08
RFTN1-208ENST00000470458 PROM2Q8N271 834 aa14.58□□□□□ -0.08
RFTN1-208ENST00000470458 FLAD1Q8NFF5 587 aa14.58□□□□□ -0.08
RFTN1-208ENST00000470458 SPON1Q9HCB6 807 aa14.58□□□□□ -0.08
RFTN1-208ENST00000470458 LRP5O75197 1615 aa14.58□□□□□ -0.08
RFTN1-208ENST00000470458 RALBP1Q15311 655 aa14.57□□□□□ -0.08
RFTN1-208ENST00000470458 ZNF530Q6P9A1 599 aaPredicted RBP14.57□□□□□ -0.08
RFTN1-208ENST00000470458 SLC16A10Q8TF71 515 aa14.57□□□□□ -0.08
RFTN1-208ENST00000470458 CCNL1Q9UK58 526 aaPredicted RBP14.57□□□□□ -0.08
RFTN1-208ENST00000470458 AKAP4Q5JQC9 854 aa14.56□□□□□ -0.08
RFTN1-208ENST00000470458 PTF1AQ7RTS3 328 aa14.56□□□□□ -0.08
RFTN1-208ENST00000470458 ITGB4P16144 1822 aa14.56□□□□□ -0.08
RFTN1-208ENST00000470458 LY75O60449 1722 aa14.55□□□□□ -0.08
RFTN1-208ENST00000470458 GAS2L2Q8NHY3 880 aa14.55□□□□□ -0.08
RFTN1-208ENST00000470458 DCAF8L1A6NGE4 600 aa14.54□□□□□ -0.08
RFTN1-208ENST00000470458 U2SURPO15042 1029 aaKnown RBP14.54□□□□□ -0.08
RFTN1-208ENST00000470458 PPP2R1AP30153 589 aa14.54□□□□□ -0.08
RFTN1-208ENST00000470458 CABP4P57796 275 aa14.54□□□□□ -0.08
RFTN1-208ENST00000470458 TFCP2L1Q9NZI6 479 aa14.54□□□□□ -0.08
RFTN1-208ENST00000470458 PALLDQ8WX93 1383 aa14.53□□□□□ -0.08
RFTN1-208ENST00000470458 FCHSD2O94868 740 aa14.53□□□□□ -0.08
RFTN1-208ENST00000470458 PIGBQ92521 554 aa14.53□□□□□ -0.08
RFTN1-208ENST00000470458 PPP1R1BQ9UD71 204 aaPredicted RBP14.53□□□□□ -0.08
RFTN1-208ENST00000470458 CNGB1Q14028 1251 aaPredicted RBP14.52□□□□□ -0.09
RFTN1-208ENST00000470458 MTFR1LQ9H019 292 aa14.52□□□□□ -0.09
RFTN1-208ENST00000470458 QSER1Q2KHR3 1735 aa14.52□□□□□ -0.09
RFTN1-208ENST00000470458 AEBP1Q8IUX7 1158 aa14.51□□□□□ -0.09
RFTN1-208ENST00000470458 HMOX1P09601 288 aa14.5□□□□□ -0.09
RFTN1-208ENST00000470458 AKT1S1Q96B36 256 aa14.5□□□□□ -0.09
RFTN1-208ENST00000470458 LOC102724428A0A0B4J2F2 783 aa14.49□□□□□ -0.09
RFTN1-208ENST00000470458 U2AF1L5P0DN76 240 aaPredicted RBP14.49□□□□□ -0.09
RFTN1-208ENST00000470458 SIK1P57059 783 aa14.49□□□□□ -0.09
RFTN1-208ENST00000470458 U2AF1Q01081 240 aaKnown RBP eCLIP14.49□□□□□ -0.09
RFTN1-208ENST00000470458 LRRC4BQ9NT99 713 aa14.49□□□□□ -0.09
RFTN1-208ENST00000470458 GNAT3A8MTJ3 354 aa14.48□□□□□ -0.09
RFTN1-208ENST00000470458 POLD1P28340 1107 aa14.48□□□□□ -0.09
RFTN1-208ENST00000470458 DDX10Q13206 875 aaKnown RBP14.48□□□□□ -0.09
RFTN1-208ENST00000470458 AK7Q96M32 723 aa14.48□□□□□ -0.09
RFTN1-208ENST00000470458 ANO8Q9HCE9 1232 aaPredicted RBP14.48□□□□□ -0.09
RFTN1-208ENST00000470458 ZNF831Q5JPB2 1677 aa14.48□□□□□ -0.09
RFTN1-208ENST00000470458 SCN11AQ9UI33 1791 aa14.47□□□□□ -0.09
RFTN1-208ENST00000470458 HTATSF1O43719 755 aaKnown RBP14.47□□□□□ -0.09
RFTN1-208ENST00000470458 ATP6V1AP38606 617 aa14.47□□□□□ -0.09
RFTN1-208ENST00000470458 RTF1Q92541 710 aaKnown RBP14.47□□□□□ -0.09
RFTN1-208ENST00000470458 PAPPAQ13219 1627 aa14.47□□□□□ -0.09
RFTN1-208ENST00000470458 C5P01031 1676 aa14.46□□□□□ -0.09
RFTN1-208ENST00000470458 COL3A1P02461 1466 aaPredicted RBP14.46□□□□□ -0.09
RFTN1-208ENST00000470458 NFATC2IPQ8NCF5 419 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms