RNA–Protein interactions for RNA: ENST00000470408.5

UBE3C-205, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 5,197 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-205ENST00000470408 RALGAPBQ86X10 1494 aa11.37□□□□□ -0.59
UBE3C-205ENST00000470408 RABEP1Q15276 862 aa11.37□□□□□ -0.59
UBE3C-205ENST00000470408 ZNF287Q9HBT7 754 aa11.37□□□□□ -0.59
UBE3C-205ENST00000470408 SRGAP3O43295 1099 aa11.36□□□□□ -0.59
UBE3C-205ENST00000470408 NFKBIBQ15653 356 aa11.36□□□□□ -0.59
UBE3C-205ENST00000470408 CCDC73Q6ZRK6 1079 aa11.36□□□□□ -0.59
UBE3C-205ENST00000470408 IFIT1P09914 478 aaKnown RBP11.36□□□□□ -0.59
UBE3C-205ENST00000470408 SETQ01105 290 aaPredicted RBP11.36□□□□□ -0.59
UBE3C-205ENST00000470408 PBRM1Q86U86 1689 aa11.36□□□□□ -0.59
UBE3C-205ENST00000470408 MRE11P49959 708 aa11.36□□□□□ -0.59
UBE3C-205ENST00000470408 ZNF771Q7L3S4 317 aaPredicted RBP11.36□□□□□ -0.59
UBE3C-205ENST00000470408 LRRC59Q96AG4 307 aaKnown RBP11.36□□□□□ -0.59
UBE3C-205ENST00000470408 PTPRCP08575 1304 aa11.35□□□□□ -0.59
UBE3C-205ENST00000470408 FYB1O15117 783 aa11.35□□□□□ -0.59
UBE3C-205ENST00000470408 KRT32Q14532 448 aa11.35□□□□□ -0.59
UBE3C-205ENST00000470408 ANKRD24Q8TF21 1146 aa11.35□□□□□ -0.59
UBE3C-205ENST00000470408 EMILIN1Q9Y6C2 1016 aa11.35□□□□□ -0.59
UBE3C-205ENST00000470408 IKQ13123 557 aaPredicted RBP11.35□□□□□ -0.59
UBE3C-205ENST00000470408 CCAR1Q8IX12 1150 aaKnown RBP11.35□□□□□ -0.59
UBE3C-205ENST00000470408 KIF1BPQ96EK5 621 aa11.35□□□□□ -0.59
UBE3C-205ENST00000470408 PDZRN3Q9UPQ7 1066 aa11.35□□□□□ -0.59
UBE3C-205ENST00000470408 GPS2Q13227 327 aa11.34□□□□□ -0.59
UBE3C-205ENST00000470408 CDCA7Q9BWT1 371 aaPredicted RBP11.34□□□□□ -0.59
UBE3C-205ENST00000470408 IPO7O95373 1038 aaKnown RBP11.34□□□□□ -0.59
UBE3C-205ENST00000470408 SLF2Q8IX21 1173 aa11.34□□□□□ -0.59
UBE3C-205ENST00000470408 BICD2Q8TD16 824 aa11.34□□□□□ -0.59
UBE3C-205ENST00000470408 PPP1R1BQ9UD71 204 aaPredicted RBP11.34□□□□□ -0.59
UBE3C-205ENST00000470408 VPS37CA5D8V6 355 aaPredicted RBP11.34□□□□□ -0.59
UBE3C-205ENST00000470408 PTCD1O75127 700 aaKnown RBP11.34□□□□□ -0.59
UBE3C-205ENST00000470408 CAVIN4Q5BKX8 364 aa11.34□□□□□ -0.59
UBE3C-205ENST00000470408 FAM13BQ9NYF5 915 aa11.34□□□□□ -0.59
UBE3C-205ENST00000470408 CREBRFQ8IUR6 639 aa11.33□□□□□ -0.6
UBE3C-205ENST00000470408 CFAP74Q9C0B2 1584 aa11.33□□□□□ -0.6
UBE3C-205ENST00000470408 TRIM22Q8IYM9 498 aa11.33□□□□□ -0.6
UBE3C-205ENST00000470408 CFAP43Q8NDM7 1665 aa11.33□□□□□ -0.6
UBE3C-205ENST00000470408 PRAG1Q86YV5 1406 aa11.33□□□□□ -0.6
UBE3C-205ENST00000470408 PES1O00541 588 aaKnown RBP11.33□□□□□ -0.6
UBE3C-205ENST00000470408 ARHGEF12Q9NZN5 1544 aa11.33□□□□□ -0.6
UBE3C-205ENST00000470408 SNRPA1P09661 255 aaKnown RBP11.32□□□□□ -0.6
UBE3C-205ENST00000470408 KCNA6P17658 529 aa11.32□□□□□ -0.6
UBE3C-205ENST00000470408 MPRIPQ6WCQ1 1025 aa11.32□□□□□ -0.6
UBE3C-205ENST00000470408 AACSQ86V21 672 aa11.32□□□□□ -0.6
UBE3C-205ENST00000470408 DNAAF4Q8WXU2 420 aa11.32□□□□□ -0.6
UBE3C-205ENST00000470408 PPIP5K1Q6PFW1 1433 aa11.32□□□□□ -0.6
UBE3C-205ENST00000470408 NOC3LQ8WTT2 800 aaKnown RBP11.32□□□□□ -0.6
UBE3C-205ENST00000470408 ADGRL2O95490 1459 aa11.32□□□□□ -0.6
UBE3C-205ENST00000470408 ATP7AQ04656 1500 aa11.32□□□□□ -0.6
UBE3C-205ENST00000470408 MCM10Q7L590 875 aa11.32□□□□□ -0.6
UBE3C-205ENST00000470408 JMYQ8N9B5 988 aa11.32□□□□□ -0.6
UBE3C-205ENST00000470408 IL27Q8NEV9 243 aa11.32□□□□□ -0.6
UBE3C-205ENST00000470408 ZCRB1Q8TBF4 217 aaKnown RBP11.32□□□□□ -0.6
UBE3C-205ENST00000470408 CYP46A1Q9Y6A2 500 aa11.32□□□□□ -0.6
UBE3C-205ENST00000470408 WDHD1O75717 1129 aaPredicted RBP11.32□□□□□ -0.6
UBE3C-205ENST00000470408 GLRX3O76003 335 aaKnown RBP11.32□□□□□ -0.6
UBE3C-205ENST00000470408 CDKL5O76039 1030 aa11.32□□□□□ -0.6
UBE3C-205ENST00000470408 PPP1R42Q7Z4L9 355 aa11.32□□□□□ -0.6
UBE3C-205ENST00000470408 AK7Q96M32 723 aa11.32□□□□□ -0.6
UBE3C-205ENST00000470408 BCAR3O75815 825 aa11.31□□□□□ -0.6
UBE3C-205ENST00000470408 TXLNAP40222 546 aa11.31□□□□□ -0.6
UBE3C-205ENST00000470408 IFIT5Q13325 482 aaKnown RBP11.31□□□□□ -0.6
UBE3C-205ENST00000470408 METTL24Q5JXM2 366 aa11.31□□□□□ -0.6
UBE3C-205ENST00000470408 TEX35Q5T0J7 233 aa11.31□□□□□ -0.6
UBE3C-205ENST00000470408 R3HCC1Q9Y3T6 440 aaKnown RBP11.31□□□□□ -0.6
UBE3C-205ENST00000470408 FOXD4L5Q5VV16 416 aaPredicted RBP11.31□□□□□ -0.6
UBE3C-205ENST00000470408 FOXD4L4Q8WXT5 416 aaPredicted RBP11.31□□□□□ -0.6
UBE3C-205ENST00000470408 ZNF396Q96N95 335 aaPredicted RBP11.31□□□□□ -0.6
UBE3C-205ENST00000470408 CDC5LQ99459 802 aaKnown RBP11.31□□□□□ -0.6
UBE3C-205ENST00000470408 CHD1LQ86WJ1 897 aa11.31□□□□□ -0.6
UBE3C-205ENST00000470408 SOS1Q07889 1333 aaPredicted RBP11.3□□□□□ -0.6
UBE3C-205ENST00000470408 LRP2BPQ9P2M1 347 aa11.3□□□□□ -0.6
UBE3C-205ENST00000470408 AEBP1Q8IUX7 1158 aa11.3□□□□□ -0.6
UBE3C-205ENST00000470408 FLT4P35916 1363 aa11.3□□□□□ -0.6
UBE3C-205ENST00000470408 ANKRD18BA2A2Z9 1011 aa11.3□□□□□ -0.6
UBE3C-205ENST00000470408 PKNOX2Q96KN3 472 aa11.3□□□□□ -0.6
UBE3C-205ENST00000470408 ZSCAN31Q96LW9 406 aaPredicted RBP11.3□□□□□ -0.6
UBE3C-205ENST00000470408 SIL1Q9H173 461 aa11.3□□□□□ -0.6
UBE3C-205ENST00000470408 RAI14Q9P0K7 980 aa11.3□□□□□ -0.6
UBE3C-205ENST00000470408 MAPKBP1O60336 1514 aa11.3□□□□□ -0.6
UBE3C-205ENST00000470408 RPGRQ92834 1020 aaKnown RBP11.3□□□□□ -0.6
UBE3C-205ENST00000470408 TRMT112Q9UI30 125 aaKnown RBP11.3□□□□□ -0.6
UBE3C-205ENST00000470408 PIK3R4Q99570 1358 aa11.3□□□□□ -0.6
UBE3C-205ENST00000470408 SLC5A1P13866 664 aa11.29□□□□□ -0.6
UBE3C-205ENST00000470408 SIRT1Q96EB6 747 aa11.29□□□□□ -0.6
UBE3C-205ENST00000470408 NKTRP30414 1462 aaKnown RBP11.29□□□□□ -0.6
UBE3C-205ENST00000470408 ZFYVE9O95405 1425 aa11.29□□□□□ -0.6
UBE3C-205ENST00000470408 NAT10Q9H0A0 1025 aaKnown RBP11.29□□□□□ -0.6
UBE3C-205ENST00000470408 PIP4K2AP48426 406 aaPredicted RBP11.29□□□□□ -0.6
UBE3C-205ENST00000470408 RBM5P52756 815 aaKnown RBP eCLIP11.29□□□□□ -0.6
UBE3C-205ENST00000470408 AKAP4Q5JQC9 854 aa11.29□□□□□ -0.6
UBE3C-205ENST00000470408 SASS6Q6UVJ0 657 aa11.29□□□□□ -0.6
UBE3C-205ENST00000470408 BICDL1Q6ZP65 573 aa11.29□□□□□ -0.6
UBE3C-205ENST00000470408 PTPRKQ15262 1439 aa11.29□□□□□ -0.6
UBE3C-205ENST00000470408 CCDC39Q9UFE4 941 aa11.29□□□□□ -0.6
UBE3C-205ENST00000470408 LETM1O95202 739 aaPredicted RBP11.28□□□□□ -0.6
UBE3C-205ENST00000470408 LDHCP07864 332 aa11.28□□□□□ -0.6
UBE3C-205ENST00000470408 MYD88Q99836 296 aa11.28□□□□□ -0.6
UBE3C-205ENST00000470408 NPATQ14207 1427 aa11.28□□□□□ -0.6
UBE3C-205ENST00000470408 ASXL1Q8IXJ9 1541 aa11.28□□□□□ -0.6
UBE3C-205ENST00000470408 SOGA3Q5TF21 947 aa11.28□□□□□ -0.6
UBE3C-205ENST00000470408 USHBP1Q8N6Y0 703 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms